Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c47463 Carica papaya HOM05D005873 ORTHO05D007582 1.4e-18 95.1 45 100.0
GSVIVG01021202001 Vitis vinifera HOM05D005873 ORTHO05D007582 8.7e-16 85.9 45 88.9
CANSAT35G0525 Cannabis sativa HOM05D005873 ORTHO05D007582 1.9e-15 84.7 45 86.7
Migut.M01045 Erythranthe guttata HOM05D005873 ORTHO05D007582 4.3e-15 83.6 45 86.7
Prupe.4G060100 Prunus persica HOM05D005873 ORTHO05D007582 5.7e-15 83.2 45 84.4
TWI38G0673 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 1.3e-14 82.0 45 84.4
Dinv04615 Davidia involucrata HOM05D005873 ORTHO05D007582 1.6e-14 81.6 45 80.0
CSS0045323 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 2.1e-14 81.3 45 82.2
CSS0049485 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 2.1e-14 81.3 45 82.2
MELO3C007214.2 Cucumis melo HOM05D005873 ORTHO05D007582 2.8e-14 80.9 45 82.2
THA.LOC104806153 Tarenaya hassleriana HOM05D005873 ORTHO05D007582 2.8e-14 80.9 45 84.4
COL.COLO4_05490 Corchorus olitorius HOM05D005873 ORTHO05D007582 3.7e-14 80.5 45 84.4
Duzib192G0329 Durio zibethinus HOM05D005873 ORTHO05D007582 3.7e-14 80.5 45 84.4
Thecc.06G172000 Theobroma cacao HOM05D005873 ORTHO05D007582 3.7e-14 80.5 45 84.4
Ciclev10014429m.g Citrus clementina HOM05D005873 ORTHO05D007582 6.2e-14 79.7 44 84.1
Dinv40666 Davidia involucrata HOM05D005873 ORTHO05D007582 6.2e-14 79.7 45 80.0
MD05G1302300 Malus domestica HOM05D005873 ORTHO05D007582 6.2e-14 79.7 45 77.8
TWI63G0032 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 6.2e-14 79.7 45 82.2
Gohir.D05G158500 Gossypium hirsutum HOM05D005873 ORTHO05D007582 8.2e-14 79.3 45 84.4
Gorai.009G163500 Gossypium raimondii HOM05D005873 ORTHO05D007582 8.2e-14 79.3 45 84.4
Lj1C1193T7 Lonicera japonica HOM05D005873 ORTHO05D007582 8.2e-14 79.3 45 80.0
CiPaw.10G058200 Carya illinoinensis HOM05D005873 ORTHO05D007582 1.1e-13 79.0 45 82.2
ClCG01G023710 Citrullus lanatus HOM05D005873 ORTHO05D007582 1.1e-13 79.0 45 80.0
MD10G1281000 Malus domestica HOM05D005873 ORTHO05D007582 1.1e-13 79.0 39 89.7
Sed0012124 Sechium edule HOM05D005873 ORTHO05D007582 1.1e-13 79.0 45 82.2
DCAR_028009 Daucus carota HOM05D005873 ORTHO05D007582 1.4e-13 78.6 45 80.0
Gohir.A05G155800 Gossypium hirsutum HOM05D005873 ORTHO05D007582 1.8e-13 78.2 45 82.2
Rhsim13G0191000 Rhododendron simsii HOM05D005873 ORTHO05D007582 1.8e-13 78.2 45 77.8
RcHm_v2.0_Chr5g0010641 Rosa chinensis HOM05D005873 ORTHO05D007582 1.8e-13 78.2 44 81.8
PGR004G0809 Punica granatum HOM05D005873 ORTHO05D007582 3.1e-13 77.4 42 83.3
Eucgr.B01514 Eucalyptus grandis HOM05D005873 ORTHO05D007582 4.1e-13 77.0 41 85.4
Nn1g04384 Nelumbo nucifera HOM05D005873 ORTHO05D007582 6.9e-13 76.3 45 80.0
TPR.G8345 Trifolium pratense HOM05D005873 ORTHO05D007582 6.9e-13 76.3 39 87.2
FvH4_3g07910 Fragaria vesca HOM05D005873 ORTHO05D007582 9.0e-13 75.9 42 81.0
FAN11G2228 Fragaria x ananassa HOM05D005873 ORTHO05D007582 9.0e-13 75.9 42 81.0
FAN16G2124 Fragaria x ananassa HOM05D005873 ORTHO05D007582 9.0e-13 75.9 42 81.0
Sc17g0005780 Simmondsia chinensis HOM05D005873 ORTHO05D007582 9.0e-13 75.9 43 79.1
Thhalv10000804m.g Eutrema salsugineum HOM05D005873 ORTHO05D007582 1.2e-12 75.5 39 87.2
SGA_v2.0_scaffold1G00037 Striga asiatica HOM05D005873 ORTHO05D007582 1.2e-12 75.5 45 77.8
MSTRG.16147 Avicennia marina HOM05D005873 ORTHO05D007582 1.5e-12 75.1 45 77.8
CsaV3_6G050860 Cucumis sativus L. HOM05D005873 ORTHO05D007582 1.5e-12 75.1 38 89.5
Lalb_Chr03g0024111 Lupinus albus HOM05D005873 ORTHO05D007582 1.5e-12 75.1 36 91.7
Nitab4.5_0003937g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 1.5e-12 75.1 45 77.8
FAN25G0256 Fragaria x ananassa HOM05D005873 ORTHO05D007582 2.0e-12 74.7 42 78.6
SalBow8G4573 Salvia bowleyana HOM05D005873 ORTHO05D007582 2.0e-12 74.7 40 85.0
Lsat_1_v5_gn_7_23000 Lactuca sativa HOM05D005873 ORTHO05D007582 2.6e-12 74.3 45 77.8
Oeu039925.1 Olea europaea HOM05D005873 ORTHO05D007582 2.6e-12 74.3 45 73.3
Peaxi162Scf00010g03612 Petunia axillaris HOM05D005873 ORTHO05D007582 2.6e-12 74.3 39 84.6
Psat7g197320 Pisum sativum HOM05D005873 ORTHO05D007582 3.4e-12 73.9 38 86.8
TAR627G0247 Trochodendron aralioides HOM05D005873 ORTHO05D007582 3.4e-12 73.9 45 77.8
CAN.G689.28 Capsicum annuum HOM05D005873 ORTHO05D007582 5.8e-12 73.2 45 75.6
Ca_21328_v3 Cicer arietinum L. HOM05D005873 ORTHO05D007582 5.8e-12 73.2 37 86.5
Potri.004G055600 Populus trichocarpa HOM05D005873 ORTHO05D007582 5.8e-12 73.2 43 76.7
Sabra04G0036300 Salix brachista HOM05D005873 ORTHO05D007582 5.8e-12 73.2 43 76.7
Aa31LG9G7130 Aethionema arabicum HOM05D005873 ORTHO05D007582 7.6e-12 72.8 42 78.6
Haze_06243 Corylus avellana HOM05D005873 ORTHO05D007582 7.6e-12 72.8 38 89.5
FAN21G0636 Fragaria x ananassa HOM05D005873 ORTHO05D007582 7.6e-12 72.8 42 76.2
ECA236G1606 Erigeron canadensis HOM05D005873 ORTHO05D007582 1.0e-11 72.4 45 75.6
arahy.Tifrunner.gnm1.ann1.6H0VZY Arachis hypogaea HOM05D005873 ORTHO05D007582 1.3e-11 72.0 41 75.6
Nn1g09089 Nelumbo nucifera HOM05D005873 ORTHO05D007582 1.3e-11 72.0 45 75.6
SHI28562 Sapria himalayana HOM05D005873 ORTHO05D007582 1.3e-11 72.0 42 71.4
vmacro01547 Vaccinium macrocarpon HOM05D005873 ORTHO05D007582 1.3e-11 72.0 43 76.7
arahy.Tifrunner.gnm1.ann1.IZWY79 Arachis hypogaea HOM05D005873 ORTHO05D007582 1.7e-11 71.6 37 83.8
QL05p046535 Quercus lobata HOM05D005873 ORTHO05D007582 1.7e-11 71.6 40 80.0
Sopen11g027640 Solanum pennellii HOM05D005873 ORTHO05D007582 2.2e-11 71.2 45 73.3
PGSC0003DMG400019634 Solanum tuberosum HOM05D005873 ORTHO05D007582 2.2e-11 71.2 45 73.3
Lj3g0011702 Lotus japonicus HOM05D005873 ORTHO05D007582 2.9e-11 70.9 37 83.8
Glyma.12G010000 Glycine max HOM05D005873 ORTHO05D007582 3.8e-11 70.5 37 83.8
Hund21181 Selenicereus undatus HOM05D005873 ORTHO05D007582 3.8e-11 70.5 42 73.8
CSS0029481 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 5.0e-11 70.1 43 72.1
Cc11_g13830 Coffea canephora HOM05D005873 ORTHO05D007582 5.0e-11 70.1 41 73.2
Phvul.011G010700 Phaseolus vulgaris HOM05D005873 ORTHO05D007582 5.0e-11 70.1 36 88.9
VMungo1127G0781 Vigna mungo HOM05D005873 ORTHO05D007582 5.0e-11 70.1 36 88.9
AT5G45900 Arabidopsis thaliana HOM05D005873 ORTHO05D007582 6.5e-11 69.7 46 76.1
CARHR176060 Cardamine hirsuta HOM05D005873 ORTHO05D007582 6.5e-11 69.7 42 76.2
PSO541G6035 Papaver somniferum HOM05D005873 ORTHO05D007582 6.5e-11 69.7 37 83.8
PSO675G7532 Papaver somniferum HOM05D005873 ORTHO05D007582 6.5e-11 69.7 37 83.8
Solyc11g068930.3 Solanum lycopersicum HOM05D005873 ORTHO05D007582 6.5e-11 69.7 45 71.1
AL8G12650 Arabidopsis lyrata HOM05D005873 ORTHO05D007582 8.4e-11 69.3 37 86.5
BcaC03g16799 Brassica carinata HOM05D005873 ORTHO05D007582 8.4e-11 69.3 37 86.5
A02p29440 Brassica napus HOM05D005873 ORTHO05D007582 8.4e-11 69.3 37 86.5
C02p46710 Brassica napus HOM05D005873 ORTHO05D007582 8.4e-11 69.3 37 86.5
BolC2t10723H Brassica oleracea HOM05D005873 ORTHO05D007582 8.4e-11 69.3 37 86.5
BraA02t07971Z Brassica rapa HOM05D005873 ORTHO05D007582 8.4e-11 69.3 37 86.5
Sp2g10820 Schrenkiella parvula HOM05D005873 ORTHO05D007582 8.4e-11 69.3 37 86.5
Medtr0003s0540 Medicago truncatula HOM05D005873 ORTHO05D007582 1.2e-09 65.5 37 75.7
Aqoxy4G00415 Aquilegia oxysepala HOM05D005873 ORTHO05D007582 1.6e-09 65.1 40 80.0
HanXRQChr05g0156521 Helianthus annuus HOM05D005873 ORTHO05D007582 1.6e-09 65.1 45 68.9
HanXRQChr13g0397371 Helianthus annuus HOM05D005873 ORTHO05D007582 1.6e-09 65.1 45 68.9
Carub.0008s0205 Capsella rubella HOM05D005873 ORTHO05D007582 2.1e-09 64.7 42 71.4
Ah.14g087180 Amaranthus hybridus HOM05D005873 ORTHO05D007582 3.5e-09 63.9 44 63.6
CDE08G0836 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 1.3e-08 62.0 36 80.6
Cfa000601 Carpinus fangiana HOM05D005873 ORTHO05D007582 1.8e-08 61.6 30 90.0
ATR0733G019 Amborella trichopoda HOM05D005873 ORTHO05D007582 2.3e-08 61.2 38 65.8
EL10Ac8g20512 Beta vulgaris HOM05D005873 ORTHO05D007582 1.9e-07 58.2 38 68.4
SEGI_08778 Sequoiadendron giganteum HOM05D005873 ORTHO05D007582 3.3e-07 57.4 38 65.8
AUR62031177 Chenopodium quinoa HOM05D005873 ORTHO05D007582 4.3e-07 57.0 40 65.0
AUR62036593 Chenopodium quinoa HOM05D005873 ORTHO05D007582 7.4e-07 56.2 41 63.4
Mapoly0015s0071 Marchantia polymorpha HOM05D005873 ORTHO05D007582 9.7e-07 55.8 38 55.3
AagrBONN_evm.TU.Sc2ySwM_117.2340 Anthoceros agrestis HOM05D005873 ORTHO05D007582 3.7e-06 53.9 37 56.8


User provided reference genes

Program Settings