Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c45444 Carica papaya HOM05D004333 ORTHO05D005363 1.4e-181 639.4 314 100.0
Sabra12G0012900 Salix brachista HOM05D004333 ORTHO05D005363 1.1e-130 470.3 314 70.7
Potri.012G020000 Populus trichocarpa HOM05D004333 ORTHO05D005363 1.5e-130 469.9 322 69.6
MD07G1295800 Malus domestica HOM05D004333 ORTHO05D005363 3.3e-130 468.8 317 71.6
Prupe.2G315300 Prunus persica HOM05D004333 ORTHO05D005363 1.3e-129 466.8 324 70.7
Gohir.A12G247800 Gossypium hirsutum HOM05D004333 ORTHO05D005363 1.7e-129 466.5 324 69.4
Gorai.008G266500 Gossypium raimondii HOM05D004333 ORTHO05D005363 1.7e-129 466.5 324 69.8
Sabra15G0006500 Salix brachista HOM05D004333 ORTHO05D005363 1.7e-129 466.5 322 69.6
Gohir.D12G248500 Gossypium hirsutum HOM05D004333 ORTHO05D005363 2.4e-128 462.6 324 69.1
Haze_00260 Corylus avellana HOM05D004333 ORTHO05D005363 5.3e-128 461.5 333 68.8
Manes.01G037200 Manihot esculenta HOM05D004333 ORTHO05D005363 9.1e-128 460.7 323 67.5
FAN10G1078 Fragaria x ananassa HOM05D004333 ORTHO05D005363 3.5e-127 458.8 324 66.7
Atru.chr12.2311 Acer truncatum HOM05D004333 ORTHO05D005363 4.5e-127 458.4 324 69.1
FAN03G1314 Fragaria x ananassa HOM05D004333 ORTHO05D005363 7.7e-127 457.6 324 66.4
FvH4_7g32380 Fragaria vesca HOM05D004333 ORTHO05D005363 1.3e-126 456.8 324 66.4
Thecc.03G204400 Theobroma cacao HOM05D004333 ORTHO05D005363 2.2e-126 456.1 324 67.0
FAN06G4186 Fragaria x ananassa HOM05D004333 ORTHO05D005363 3.8e-126 455.3 324 66.0
Potri.015G008500 Populus trichocarpa HOM05D004333 ORTHO05D005363 3.8e-126 455.3 322 67.7
TWI39G1232 Tripterygium wilfordii HOM05D004333 ORTHO05D005363 3.8e-126 455.3 323 67.5
FAN20G1934 Fragaria x ananassa HOM05D004333 ORTHO05D005363 6.5e-126 454.5 324 65.7
FAN10G0319 Fragaria x ananassa HOM05D004333 ORTHO05D005363 8.5e-126 454.1 324 66.0
FAN01G1860 Fragaria x ananassa HOM05D004333 ORTHO05D005363 1.1e-125 453.8 324 65.4
RcHm_v2.0_Chr1g0381961 Rosa chinensis HOM05D004333 ORTHO05D005363 1.5e-125 453.4 324 66.4
CiPaw.05G200800 Carya illinoinensis HOM05D004333 ORTHO05D005363 2.5e-125 452.6 332 67.2
Cfa016195 Carpinus fangiana HOM05D004333 ORTHO05D005363 5.5e-125 451.4 332 67.5
QL11p010725 Quercus lobata HOM05D004333 ORTHO05D005363 7.2e-125 451.1 333 67.0
TAR633G0098 Trochodendron aralioides HOM05D004333 ORTHO05D005363 5.2e-123 444.9 322 68.0
Dinv32109 Davidia involucrata HOM05D004333 ORTHO05D005363 6.7e-123 444.5 321 67.9
Duzib068G0008 Durio zibethinus HOM05D004333 ORTHO05D005363 6.7e-123 444.5 323 66.6
Gorai.006G202800 Gossypium raimondii HOM05D004333 ORTHO05D005363 4.4e-122 441.8 324 66.0
CSS0015753 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 8.2e-121 437.6 320 64.7
MD01G1225300 Malus domestica HOM05D004333 ORTHO05D005363 8.2e-121 437.6 317 68.1
Gohir.D09G180800 Gossypium hirsutum HOM05D004333 ORTHO05D005363 1.4e-120 436.8 324 65.1
CSS0025528 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 1.8e-120 436.4 320 64.7
Gohir.A09G185800 Gossypium hirsutum HOM05D004333 ORTHO05D005363 5.3e-120 434.9 324 65.4
THA.LOC104798907 Tarenaya hassleriana HOM05D004333 ORTHO05D005363 5.3e-120 434.9 312 65.1
PGR142G3828 Punica granatum HOM05D004333 ORTHO05D005363 3.5e-119 432.2 314 64.3
Actinidia08674 Actinidia chinensis HOM05D004333 ORTHO05D005363 1.0e-118 430.6 321 64.8
vmacro06413 Vaccinium macrocarpon HOM05D004333 ORTHO05D005363 1.0e-118 430.6 320 66.6
Medtr3g091940 Medicago truncatula HOM05D004333 ORTHO05D005363 1.7e-118 429.9 317 65.6
Rhsim03G0212200 Rhododendron simsii HOM05D004333 ORTHO05D005363 5.0e-118 428.3 320 65.6
Ca_16734_v3 Cicer arietinum L. HOM05D004333 ORTHO05D005363 9.4e-117 424.1 319 64.3
Sp2g22970 Schrenkiella parvula HOM05D004333 ORTHO05D005363 1.2e-116 423.7 312 63.8
TPR.G33633 Trifolium pratense HOM05D004333 ORTHO05D005363 1.6e-116 423.3 317 64.7
A06p35170 Brassica napus HOM05D004333 ORTHO05D005363 6.1e-116 421.4 312 63.1
CARHR189090 Cardamine hirsuta HOM05D004333 ORTHO05D005363 8.0e-116 421.0 312 63.1
Ciclev10000006m.g Citrus clementina HOM05D004333 ORTHO05D005363 1.0e-115 420.6 293 68.6
CANSAT21G1061 Cannabis sativa HOM05D004333 ORTHO05D005363 2.3e-115 419.5 322 64.3
AL6G35880 Arabidopsis lyrata HOM05D004333 ORTHO05D005363 3.0e-115 419.1 312 62.8
Cc02_g01170 Coffea canephora HOM05D004333 ORTHO05D005363 3.0e-115 419.1 318 63.5
Thhalv10003502m.g Eutrema salsugineum HOM05D004333 ORTHO05D005363 4.0e-115 418.7 314 62.7
Glyma.04G232700 Glycine max HOM05D004333 ORTHO05D005363 4.0e-115 418.7 316 62.7
Lj1g0003347 Lotus japonicus HOM05D004333 ORTHO05D005363 6.8e-115 417.9 319 63.3
Aa31LG11G3630 Aethionema arabicum HOM05D004333 ORTHO05D005363 1.2e-114 417.2 311 63.0
BraA06t26437Z Brassica rapa HOM05D004333 ORTHO05D005363 1.2e-114 417.2 312 62.2
C07p43390 Brassica napus HOM05D004333 ORTHO05D005363 1.5e-114 416.8 314 62.1
AT5G24350 Arabidopsis thaliana HOM05D004333 ORTHO05D005363 2.0e-114 416.4 312 62.8
Phvul.009G048100 Phaseolus vulgaris HOM05D004333 ORTHO05D005363 2.6e-114 416.0 319 62.4
ClCG03G011440 Citrullus lanatus HOM05D004333 ORTHO05D005363 4.4e-114 415.2 322 61.5
Psat5g074840 Pisum sativum HOM05D004333 ORTHO05D005363 5.7e-114 414.8 317 63.1
BolC7t44866H Brassica oleracea HOM05D004333 ORTHO05D005363 7.5e-114 414.5 312 62.2
Glyma.06G132300 Glycine max HOM05D004333 ORTHO05D005363 1.3e-113 413.7 316 62.0
MBI06_g06689_MAGBIO Magnolia biondii HOM05D004333 ORTHO05D005363 1.7e-113 413.3 315 63.5
BcaNung01227 Brassica carinata HOM05D004333 ORTHO05D005363 2.8e-113 412.5 312 62.2
Lalb_Chr08g0240011 Lupinus albus HOM05D004333 ORTHO05D005363 8.3e-113 411.0 319 63.0
Sopen03g022440 Solanum pennellii HOM05D004333 ORTHO05D005363 1.1e-112 410.6 315 64.4
VMungo1309G1648 Vigna mungo HOM05D004333 ORTHO05D005363 1.1e-112 410.6 319 61.4
Eucgr.D00250 Eucalyptus grandis HOM05D004333 ORTHO05D005363 3.1e-112 409.1 314 64.0
arahy.Tifrunner.gnm1.ann1.SMAV3X Arachis hypogaea HOM05D004333 ORTHO05D005363 4.1e-112 408.7 318 61.9
GSVIVG01038603001 Vitis vinifera HOM05D004333 ORTHO05D005363 4.1e-112 408.7 281 69.4
arahy.Tifrunner.gnm1.ann1.F5KWPZ Arachis hypogaea HOM05D004333 ORTHO05D005363 9.1e-112 407.5 318 62.3
Nn7g38041 Nelumbo nucifera HOM05D004333 ORTHO05D005363 3.5e-111 405.6 317 61.2
CsaV3_1G044960 Cucumis sativus L. HOM05D004333 ORTHO05D005363 1.7e-110 403.3 324 59.3
MELO3C010103.2 Cucumis melo HOM05D004333 ORTHO05D005363 1.1e-109 400.6 324 59.3
Nitab4.5_0008197g0020 Nicotiana tabacum HOM05D004333 ORTHO05D005363 1.6e-108 396.7 317 62.1
Sed0018682 Sechium edule HOM05D004333 ORTHO05D005363 1.6e-108 396.7 321 60.1
Aqoxy5G04259 Aquilegia oxysepala HOM05D004333 ORTHO05D005363 1.4e-107 393.7 321 62.0
Peaxi162Scf00740g00426 Petunia axillaris HOM05D004333 ORTHO05D005363 1.4e-107 393.7 318 61.6
Sc19g0000760 Simmondsia chinensis HOM05D004333 ORTHO05D005363 2.3e-107 392.9 312 58.7
Migut.F00177 Erythranthe guttata HOM05D004333 ORTHO05D005363 3.0e-107 392.5 319 61.4
DCAR_020346 Daucus carota HOM05D004333 ORTHO05D005363 4.0e-107 392.1 314 60.5
Lj1C1024G7 Lonicera japonica HOM05D004333 ORTHO05D005363 4.0e-107 392.1 314 59.9
Nitab4.5_0010367g0010 Nicotiana tabacum HOM05D004333 ORTHO05D005363 6.8e-107 391.3 318 61.0
SGA_v2.0_scaffold18G08437 Striga asiatica HOM05D004333 ORTHO05D005363 4.4e-106 388.7 318 60.1
MSTRG.27005 Avicennia marina HOM05D004333 ORTHO05D005363 3.7e-105 385.6 317 58.4
PSO063G3257 Papaver somniferum HOM05D004333 ORTHO05D005363 1.4e-104 383.6 312 60.6
HanXRQChr04g0107121 Helianthus annuus HOM05D004333 ORTHO05D005363 1.8e-104 383.3 313 59.7
CAN.G481.56 Capsicum annuum HOM05D004333 ORTHO05D005363 4.1e-104 382.1 303 63.0
Hund21026 Selenicereus undatus HOM05D004333 ORTHO05D005363 1.6e-103 380.2 312 58.3
Lsat_1_v5_gn_9_49400 Lactuca sativa HOM05D004333 ORTHO05D005363 4.3e-101 372.1 311 59.8
EL10Ac9g21652 Beta vulgaris HOM05D004333 ORTHO05D005363 1.0e-99 367.5 311 55.3
AUR62010404 Chenopodium quinoa HOM05D004333 ORTHO05D005363 2.6e-98 362.8 311 55.3
SHI08285 Sapria himalayana HOM05D004333 ORTHO05D000009 4.4e-98 362.1 322 55.9
CDE02G3740 Ceratophyllum demersum HOM05D004333 ORTHO05D005363 1.4e-96 357.1 311 54.0
Ah.01g018970 Amaranthus hybridus HOM05D004333 ORTHO05D005363 2.0e-95 353.2 309 55.0
Aa31LG11G3970 Aethionema arabicum HOM05D004333 ORTHO05D005363 5.9e-95 351.7 311 56.3
AUR62016813 Chenopodium quinoa HOM05D004333 ORTHO05D005363 1.3e-94 350.5 311 53.7
ATR0697G293 Amborella trichopoda HOM05D004333 ORTHO05D005363 9.8e-90 334.3 323 53.6
COL.COLO4_16822 Corchorus olitorius HOM05D004333 ORTHO05D005363 1.1e-88 330.9 324 54.3
Zm00001eb359130 Zea mays HOM05D004333 ORTHO05D005363 4.7e-84 315.5 307 50.8
SalBow4G2088 Salvia bowleyana HOM05D004333 ORTHO05D005363 1.4e-83 313.9 319 49.8
unitig_0.g2452 Utricularia gibba HOM05D004333 ORTHO05D005363 8.9e-83 311.2 311 48.9
Psat0s2221g0080 Pisum sativum HOM05D004333 ORTHO05D005363 4.4e-82 308.9 256 58.2
SEGI_07013 Sequoiadendron giganteum HOM05D004333 ORTHO05D000001 1.6e-76 290.4 327 47.4
HPP92_002817 Vanilla planifolia HOM05D004333 ORTHO05D005363 3.6e-76 289.3 318 48.4
CAN.G481.58 Capsicum annuum HOM05D004333 ORTHO05D005363 8.4e-73 278.1 212 65.6
Carub.0006s2217 Capsella rubella HOM05D004333 ORTHO05D005363 1.0e-70 271.2 188 68.1
SMO356G0059 Selaginella moellendorffii HOM05D004333 ORTHO05D005363 8.4e-57 224.9 311 41.2
Pp3c1_3140 Physcomitrium patens HOM05D004333 ORTHO05D005363 2.4e-56 223.4 318 38.4
Mapoly0143s0007 Marchantia polymorpha HOM05D004333 ORTHO05D005363 3.2e-56 223.0 328 39.6
ECA232G2446 Erigeron canadensis HOM05D004333 ORTHO05D005363 5.1e-54 215.7 310 40.0
AagrBONN_evm.TU.Sc2ySwM_362.1567 Anthoceros agrestis HOM05D004333 ORTHO05D005363 1.9e-53 213.8 325 35.4
CBR_g48777 Chara braunii HOM05D004333 ORTHO05D005363 1.7e-41 174.1 334 33.5
Carub.0006s2218 Capsella rubella HOM05D004333 ORTHO05D005363 1.3e-28 131.3 111 53.2
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 7.2e-24 115.5 140 45.0
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 8.5e-17 92.0 122 42.6
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 1.9e-16 90.9 77 54.5


User provided reference genes

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