Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c42295 Carica papaya HOM05D005453 ORTHO05D006520 2.7e-52 208.4 106 100.0
Actinidia19854 Actinidia chinensis HOM05D005453 ORTHO05D006520 1.2e-42 176.4 106 82.1
Prupe.1G266900 Prunus persica HOM05D005453 ORTHO05D006520 7.5e-42 173.7 105 83.8
Gohir.D02G169300 Gossypium hirsutum HOM05D005453 ORTHO05D006520 2.2e-41 172.2 106 83.0
Gorai.005G189700 Gossypium raimondii HOM05D005453 ORTHO05D006520 2.2e-41 172.2 106 83.0
COL.COLO4_36184 Corchorus olitorius HOM05D005453 ORTHO05D006520 2.8e-41 171.8 106 81.1
Thecc.02G232200 Theobroma cacao HOM05D005453 ORTHO05D006520 4.9e-41 171.0 106 80.2
Duzib268G1123 Durio zibethinus HOM05D005453 ORTHO05D006520 6.3e-41 170.6 106 81.1
Eucgr.B03405 Eucalyptus grandis HOM05D005453 ORTHO05D006520 6.3e-41 170.6 104 80.8
MD13G1079900 Malus domestica HOM05D005453 ORTHO05D006520 8.3e-41 170.2 106 78.3
COL.COLO4_34957 Corchorus olitorius HOM05D005453 ORTHO05D006520 1.4e-40 169.5 106 80.2
TWI75G0114 Tripterygium wilfordii HOM05D005453 ORTHO05D006520 1.8e-40 169.1 102 80.4
QL03p065960 Quercus lobata HOM05D005453 ORTHO05D006520 2.4e-40 168.7 105 79.0
Manes.01G191800 Manihot esculenta HOM05D005453 ORTHO05D006520 3.1e-40 168.3 105 78.1
Potri.008G194300 Populus trichocarpa HOM05D005453 ORTHO05D006520 1.6e-39 166.0 101 82.2
Cfa009044 Carpinus fangiana HOM05D005453 ORTHO05D006520 2.0e-39 165.6 105 79.0
Nn4g23024 Nelumbo nucifera HOM05D005453 ORTHO05D006520 2.7e-39 165.2 106 76.4
Ciclev10031079m.g Citrus clementina HOM05D005453 ORTHO05D006520 3.5e-39 164.9 104 76.9
Nitab4.5_0002382g0040 Nicotiana tabacum HOM05D005453 ORTHO05D006520 3.5e-39 164.9 102 80.4
GSVIVG01020082001 Vitis vinifera HOM05D005453 ORTHO05D006520 3.5e-39 164.9 106 77.4
Sc11g0001640 Simmondsia chinensis HOM05D005453 ORTHO05D006520 4.5e-39 164.5 102 78.4
CANSAT64G2233 Cannabis sativa HOM05D005453 ORTHO05D006520 5.9e-39 164.1 105 78.1
Sabra08G0147800 Salix brachista HOM05D005453 ORTHO05D006520 7.8e-39 163.7 103 78.6
CiPaw.05G140600 Carya illinoinensis HOM05D005453 ORTHO05D006520 1.3e-38 162.9 106 78.3
PGR102G2554 Punica granatum HOM05D005453 ORTHO05D006520 1.3e-38 162.9 103 73.8
Haze_12074 Corylus avellana HOM05D005453 ORTHO05D006520 1.7e-38 162.5 102 79.4
Migut.L01350 Erythranthe guttata HOM05D005453 ORTHO05D006520 1.7e-38 162.5 103 76.7
TAR374G0997 Trochodendron aralioides HOM05D005453 ORTHO05D006520 1.7e-38 162.5 105 76.2
MSTRG.666 Avicennia marina HOM05D005453 ORTHO05D006520 2.9e-38 161.8 101 81.2
ClCG05G024670 Citrullus lanatus HOM05D005453 ORTHO05D006520 2.9e-38 161.8 106 73.6
RcHm_v2.0_Chr4g0440791 Rosa chinensis HOM05D005453 ORTHO05D006520 2.9e-38 161.8 106 76.4
FAN12G1353 Fragaria x ananassa HOM05D005453 ORTHO05D006520 3.8e-38 161.4 106 77.4
Potri.010G034600 Populus trichocarpa HOM05D005453 ORTHO05D006520 6.6e-38 160.6 100 81.0
FvH4_4g32100 Fragaria vesca HOM05D005453 ORTHO05D006520 1.1e-37 159.8 106 76.4
Glyma.02G022500 Glycine max HOM05D005453 ORTHO05D006520 1.1e-37 159.8 101 74.3
MELO3C012058.2 Cucumis melo HOM05D005453 ORTHO05D006520 1.5e-37 159.5 106 72.6
CsaV3_5G032260 Cucumis sativus L. HOM05D005453 ORTHO05D006520 1.5e-37 159.5 106 72.6
Gohir.A03G146000 Gossypium hirsutum HOM05D005453 ORTHO05D006520 1.5e-37 159.5 98 82.7
MBI05_g12576_MAGBIO Magnolia biondii HOM05D005453 ORTHO05D006520 1.9e-37 159.1 100 78.0
Oeu011701.1 Olea europaea HOM05D005453 ORTHO05D006520 1.9e-37 159.1 102 75.5
Hma1.2p1_0265F.1_g106550 Hydrangea macrophylla HOM05D005453 ORTHO05D006520 3.3e-37 158.3 103 75.7
Lalb_Chr10g0097931 Lupinus albus HOM05D005453 ORTHO05D006520 3.3e-37 158.3 104 73.1
Duzib248G1267 Durio zibethinus HOM05D005453 ORTHO05D006520 4.3e-37 157.9 98 79.6
MD16G1079800 Malus domestica HOM05D005453 ORTHO05D006520 5.6e-37 157.5 98 79.6
Dinv34193 Davidia involucrata HOM05D005453 ORTHO05D006520 9.5e-37 156.8 98 79.6
Ah.03g132040 Amaranthus hybridus HOM05D006025 ORTHO05D008547 2.1e-36 155.6 104 75.0
MSTRG.7832 Avicennia marina HOM05D005453 ORTHO05D006520 2.1e-36 155.6 102 76.5
VMungo1215G2350 Vigna mungo HOM05D005453 ORTHO05D006520 2.1e-36 155.6 102 71.6
Rhsim12G0129300 Rhododendron simsii HOM05D005453 ORTHO05D006520 2.8e-36 155.2 104 74.0
TAR622G1188 Trochodendron aralioides HOM05D005453 ORTHO05D006520 3.6e-36 154.8 106 72.6
AUR62026269 Chenopodium quinoa HOM05D005453 ORTHO05D006520 6.1e-36 154.1 104 74.0
ECA234G1124 Erigeron canadensis HOM05D005453 ORTHO05D006520 8.0e-36 153.7 106 68.9
TPR.G29465 Trifolium pratense HOM05D005453 ORTHO05D006520 1.0e-35 153.3 104 70.2
vmacro16321 Vaccinium macrocarpon HOM05D005453 ORTHO05D006520 2.3e-35 152.1 102 72.5
Glyma.01G041500 Glycine max HOM05D005453 ORTHO05D006520 3.0e-35 151.8 101 70.3
arahy.Tifrunner.gnm1.ann1.7H81I7 Arachis hypogaea HOM05D005453 ORTHO05D006520 4.0e-35 151.4 104 69.2
EL10Ac6g13139 Beta vulgaris HOM05D005453 ORTHO05D006520 4.0e-35 151.4 104 72.1
CARHR024830 Cardamine hirsuta HOM05D005453 ORTHO05D006520 5.2e-35 151.0 103 72.8
AT1G27070 Arabidopsis thaliana HOM05D005453 ORTHO05D006520 6.8e-35 150.6 102 73.5
arahy.Tifrunner.gnm1.ann1.62035P Arachis hypogaea HOM05D005453 ORTHO05D006520 1.2e-34 149.8 104 68.3
CSS0029199 Camellia sinensis var. sinensis HOM05D005453 ORTHO05D006520 1.5e-34 149.4 98 77.6
Carub.0001s2390 Capsella rubella HOM05D005453 ORTHO05D006520 2.0e-34 149.1 102 73.5
Oeu057176.2 Olea europaea HOM05D005453 ORTHO05D006520 2.0e-34 149.1 95 81.1
arahy.Tifrunner.gnm1.ann1.C864RN Arachis hypogaea HOM05D005453 ORTHO05D006520 2.6e-34 148.7 104 67.3
Phvul.002G067500 Phaseolus vulgaris HOM05D005453 ORTHO05D006520 2.6e-34 148.7 102 68.6
BcaB07g32384 Brassica carinata HOM05D005453 ORTHO05D006520 7.5e-34 147.1 103 68.9
THA.LOC104822093 Tarenaya hassleriana HOM05D005453 ORTHO05D006520 7.5e-34 147.1 101 73.3
Peaxi162Scf00209g00610 Petunia axillaris HOM05D005453 ORTHO05D006520 1.3e-33 146.4 104 69.2
AUR62026459 Chenopodium quinoa HOM05D005453 ORTHO05D006520 1.7e-33 146.0 98 74.5
DCAR_031056 Daucus carota HOM05D005453 ORTHO05D006520 1.7e-33 146.0 105 65.7
HanXRQChr08g0209161 Helianthus annuus HOM05D005453 ORTHO05D006520 1.7e-33 146.0 105 67.6
Nitab4.5_0002291g0010 Nicotiana tabacum HOM05D005453 ORTHO05D006520 1.7e-33 146.0 95 76.8
Sopen01g006070 Solanum pennellii HOM05D005453 ORTHO05D006520 2.2e-33 145.6 94 77.7
A09p40480 Brassica napus HOM05D003373 ORTHO05D004419 3.7e-33 144.8 103 69.9
BraA09t39545Z Brassica rapa HOM05D003373 ORTHO05D006520 3.7e-33 144.8 103 69.9
CAN.G827.6 Capsicum annuum HOM05D005453 ORTHO05D006520 3.7e-33 144.8 94 76.6
Sed0006777 Sechium edule HOM05D005453 ORTHO05D006520 4.9e-33 144.4 104 69.2
Cc11_g13580 Coffea canephora HOM05D005453 ORTHO05D006520 1.1e-32 143.3 103 70.9
Sed0004157 Sechium edule HOM05D005453 ORTHO05D006520 1.4e-32 142.9 99 68.7
PGSC0003DMG400026781 Solanum tuberosum HOM05D005453 ORTHO05D006520 1.4e-32 142.9 94 75.5
ATR0665G247 Amborella trichopoda HOM05D005453 ORTHO05D006520 1.8e-32 142.5 100 67.0
Nitab4.5_0000679g0110 Nicotiana tabacum HOM05D005453 ORTHO05D006520 1.8e-32 142.5 102 70.6
Medtr5g038210 Medicago truncatula HOM05D005453 ORTHO05D006520 2.4e-32 142.1 104 65.4
Nitab4.5_0002969g0050 Nicotiana tabacum HOM05D005453 ORTHO05D006520 2.4e-32 142.1 102 70.6
Peaxi162Scf00026g02226 Petunia axillaris HOM05D005453 ORTHO05D006520 2.4e-32 142.1 103 70.9
Aa31LG7G8080 Aethionema arabicum HOM05D005453 ORTHO05D006520 3.2e-32 141.7 103 69.9
FAN22G2419 Fragaria x ananassa HOM05D005453 ORTHO05D006520 5.4e-32 141.0 107 71.0
PSO017G4002 Papaver somniferum HOM05D005453 ORTHO05D006520 5.4e-32 141.0 104 67.3
PSO478G0523 Papaver somniferum HOM05D005453 ORTHO05D006520 5.4e-32 141.0 104 67.3
Sabra10G0030200 Salix brachista HOM05D005453 ORTHO05D006520 5.4e-32 141.0 97 72.2
BcaC05g26346 Brassica carinata HOM05D005453 ORTHO05D006520 9.2e-32 140.2 104 69.2
C05p23700 Brassica napus HOM05D003373 ORTHO05D004419 9.2e-32 140.2 104 69.2
BolC5t31089H Brassica oleracea HOM05D005453 ORTHO05D006520 9.2e-32 140.2 104 69.2
SGA_v2.0_scaffold163G38065 Striga asiatica HOM05D005453 ORTHO05D006520 1.2e-31 139.8 99 68.7
Lsat_1_v5_gn_8_53620 Lactuca sativa HOM05D005453 ORTHO05D006520 2.7e-31 138.7 105 64.8
Ca_07371_v3 Cicer arietinum L. HOM05D005453 ORTHO05D006520 4.6e-31 137.9 96 66.7
Nn3g17115 Nelumbo nucifera HOM05D005453 ORTHO05D006520 5.9e-31 137.5 103 64.1
Sp1g21710 Schrenkiella parvula HOM05D005453 ORTHO05D006520 1.3e-30 136.3 103 67.0
Atru.chr11.1865 Acer truncatum HOM05D005453 ORTHO05D006520 3.0e-30 135.2 83 80.7
Solyc05g006930.3 Solanum lycopersicum HOM05D005453 ORTHO05D006520 3.0e-30 135.2 102 65.7
Sopen05g002890 Solanum pennellii HOM05D005453 ORTHO05D006520 3.0e-30 135.2 102 65.7
PGSC0003DMG400017617 Solanum tuberosum HOM05D005453 ORTHO05D006520 3.0e-30 135.2 102 65.7
Hund05918 Selenicereus undatus HOM05D005453 ORTHO05D006520 1.1e-29 133.3 101 66.3
unitig_22.g6530 Utricularia gibba HOM05D005453 ORTHO05D006520 1.1e-29 133.3 98 65.3
SalBow2G2835 Salvia bowleyana HOM05D005453 ORTHO05D006520 7.3e-29 130.6 102 63.7
CDE06G1042 Ceratophyllum demersum HOM05D005453 ORTHO05D006520 1.6e-28 129.4 103 59.2
Lj2g0004726 Lotus japonicus HOM05D005453 ORTHO05D006520 2.1e-28 129.0 104 62.5
Os03g0686900 Oryza sativa ssp. japonica HOM05D005453 ORTHO05D006520 1.8e-27 125.9 93 63.4
Thhalv10007340m.g Eutrema salsugineum HOM05D005453 ORTHO05D006520 4.0e-27 124.8 83 74.7
Zm00001eb053230 Zea mays HOM05D005453 ORTHO05D006520 5.2e-27 124.4 93 60.2
CAN.G27.11 Capsicum annuum HOM05D005453 ORTHO05D006520 1.2e-26 123.2 102 61.8
FAN07G1475 Fragaria x ananassa HOM05D005453 ORTHO05D006520 1.2e-26 123.2 106 64.2
Hund25276 Selenicereus undatus HOM05D005453 ORTHO05D006520 1.2e-26 123.2 158 47.5
Zm00001eb217200 Zea mays HOM05D005453 ORTHO05D006520 9.8e-26 120.2 93 57.0
Solyc01g010470.2 Solanum lycopersicum HOM05D005453 ORTHO05D006520 2.2e-25 119.0 94 69.1
Aqoxy3G03253 Aquilegia oxysepala HOM05D005453 ORTHO05D006520 3.7e-25 118.2 133 48.9
Sc04g0008480 Simmondsia chinensis HOM05D005453 ORTHO05D006520 8.3e-25 117.1 105 59.0
AL1G38420 Arabidopsis lyrata HOM05D005453 ORTHO05D006520 6.0e-23 110.9 67 80.6
SEGI_23512 Sequoiadendron giganteum HOM05D005453 ORTHO05D006520 2.8e-20 102.1 102 53.9
HPP92_018829 Vanilla planifolia HOM05D005453 ORTHO05D006520 5.2e-19 97.8 107 49.5
CBR_g23347 Chara braunii HOM05D005453 ORTHO05D006520 2.7e-15 85.5 92 46.7
Mapoly0020s0141 Marchantia polymorpha HOM05D005453 ORTHO05D006520 7.8e-15 84.0 103 45.6
TPR.G23943 Trifolium pratense HOM05D005453 ORTHO05D006520 4.7e-12 74.7 49 63.3
Psat2g125480 Pisum sativum HOM05D005453 ORTHO05D006520 1.1e-11 73.6 54 68.5
Lalb_Chr04g0256401 Lupinus albus HOM05D005453 ORTHO05D006520 1.4e-11 73.2 54 68.5
SMO353G0350 Selaginella moellendorffii HOM05D005453 ORTHO05D006520 1.4e-11 73.2 65 52.3
AagrBONN_evm.TU.Sc2ySwM_362.2026 Anthoceros agrestis HOM05D007148 ORTHO05D009047 1.0e-06 57.0 93 30.1


User provided reference genes

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