Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c42029 Carica papaya HOM05D004252 ORTHO05D005101 3.9e-207 724.5 364 100.0
QL03p026982 Quercus lobata HOM05D004252 ORTHO05D005101 4.7e-176 621.3 360 85.8
Haze_04358 Corylus avellana HOM05D004252 ORTHO05D005101 1.5e-174 616.3 357 85.7
Cfa006427 Carpinus fangiana HOM05D004252 ORTHO05D005101 1.3e-173 613.2 360 85.0
Manes.09G152800 Manihot esculenta HOM05D004252 ORTHO05D005101 6.3e-173 610.9 354 84.5
Gohir.A08G215700 Gossypium hirsutum HOM05D004252 ORTHO05D005101 1.2e-171 606.7 360 83.9
CiPaw.08G123300 Carya illinoinensis HOM05D004252 ORTHO05D005101 1.3e-170 603.2 360 83.1
Duzib128G1785 Durio zibethinus HOM05D004252 ORTHO05D005101 2.2e-170 602.4 355 83.7
Ciclev10000014m.g Citrus clementina HOM05D004252 ORTHO05D005101 2.9e-170 602.1 360 84.2
Dinv20302 Davidia involucrata HOM05D004252 ORTHO05D005101 2.9e-170 602.1 360 83.3
Gohir.D08G232300 Gossypium hirsutum HOM05D004252 ORTHO05D005101 5.0e-170 601.3 360 83.3
Potri.013G041201 Populus trichocarpa HOM05D004252 ORTHO05D005101 1.5e-169 599.7 355 84.2
Thecc.05G283200 Theobroma cacao HOM05D004252 ORTHO05D005101 1.9e-169 599.4 360 83.3
Gorai.004G246800 Gossypium raimondii HOM05D004252 ORTHO05D005101 3.2e-169 598.6 360 83.1
Sabra13G0038000 Salix brachista HOM05D004252 ORTHO05D005101 1.2e-168 596.7 355 83.7
COL.COLO4_15351 Corchorus olitorius HOM05D004252 ORTHO05D005101 1.6e-168 596.3 360 82.5
MD12G1241600 Malus domestica HOM05D004252 ORTHO05D005101 2.1e-168 595.9 360 81.7
GSVIVG01021781001 Vitis vinifera HOM05D004252 ORTHO05D005101 3.6e-168 595.1 360 81.7
Potri.005G053700 Populus trichocarpa HOM05D004252 ORTHO05D005101 6.1e-168 594.3 354 82.8
CSS0026350 Camellia sinensis var. sinensis HOM05D004252 ORTHO05D005101 1.0e-167 593.6 360 82.2
Eucgr.B02119 Eucalyptus grandis HOM05D004252 ORTHO05D005101 4.0e-167 591.7 359 81.9
Sabra05G0047100 Salix brachista HOM05D004252 ORTHO05D005101 8.8e-167 590.5 354 82.2
MD04G1224900 Malus domestica HOM05D004252 ORTHO05D005101 1.2e-166 590.1 360 80.8
CANSAT54G1217 Cannabis sativa HOM05D004252 ORTHO05D005101 2.6e-166 589.0 353 82.7
Actinidia32806 Actinidia chinensis HOM05D004252 ORTHO05D005101 3.3e-166 588.6 360 81.7
Duzib177G1152 Durio zibethinus HOM05D004252 ORTHO05D005101 4.4e-166 588.2 360 81.9
ClCG02G016630 Citrullus lanatus HOM05D004252 ORTHO05D005101 5.7e-166 587.8 355 80.6
Prupe.6G343600 Prunus persica HOM05D004252 ORTHO05D005101 9.7e-166 587.0 360 81.1
TWI12G0933 Tripterygium wilfordii HOM05D004252 ORTHO05D005101 9.7e-166 587.0 359 81.3
TAR362G1238 Trochodendron aralioides HOM05D004252 ORTHO05D005101 9.7e-166 587.0 360 80.6
Rhsim04G0066800 Rhododendron simsii HOM05D004252 ORTHO05D005101 5.3e-164 581.3 366 78.4
Dinv08153 Davidia involucrata HOM05D004252 ORTHO05D005101 7.0e-164 580.9 360 81.9
Nitab4.5_0001592g0060 Nicotiana tabacum HOM05D004252 ORTHO05D005101 7.0e-164 580.9 360 80.0
Nitab4.5_0008996g0010 Nicotiana tabacum HOM05D004252 ORTHO05D005101 9.1e-164 580.5 360 79.4
vmacro20358 Vaccinium macrocarpon HOM05D004252 ORTHO05D005101 3.5e-163 578.6 360 79.4
Peaxi162Scf00282g00418 Petunia axillaris HOM05D004252 ORTHO05D005101 4.5e-163 578.2 360 79.4
CsaV3_2G004140 Cucumis sativus L. HOM05D004252 ORTHO05D005101 5.9e-163 577.8 355 78.9
TAR633G0655 Trochodendron aralioides HOM05D004252 ORTHO05D005101 1.3e-162 576.6 360 78.3
CAN.G134.97 Capsicum annuum HOM05D004252 ORTHO05D005101 2.2e-162 575.9 360 78.9
MELO3C004380.2 Cucumis melo HOM05D004252 ORTHO05D005101 2.2e-162 575.9 355 78.6
Sed0020402 Sechium edule HOM05D004252 ORTHO05D005101 2.9e-162 575.5 355 80.0
Nn3g19509 Nelumbo nucifera HOM05D004252 ORTHO05D005101 3.8e-162 575.1 360 78.1
arahy.Tifrunner.gnm1.ann1.9CBY7M Arachis hypogaea HOM05D004252 ORTHO05D005101 6.5e-162 574.3 359 78.3
Solyc01g097320.3 Solanum lycopersicum HOM05D004252 ORTHO05D005101 6.5e-162 574.3 360 78.6
VMungo0540G0159 Vigna mungo HOM05D004252 ORTHO05D005101 1.5e-161 573.2 356 77.2
RcHm_v2.0_Chr3g0451091 Rosa chinensis HOM05D004252 ORTHO05D005101 1.9e-161 572.8 360 77.8
Ca_09423_v3 Cicer arietinum L. HOM05D004252 ORTHO05D005101 4.2e-161 571.6 359 77.2
Ca_29790_v3 Cicer arietinum L. HOM05D004252 ORTHO05D005101 4.2e-161 571.6 359 77.2
Psat3g007080 Pisum sativum HOM05D004252 ORTHO05D005101 7.2e-161 570.9 359 78.0
Glyma.19G245100 Glycine max HOM05D004252 ORTHO05D005101 1.2e-160 570.1 362 76.5
arahy.Tifrunner.gnm1.ann1.39XKQR Arachis hypogaea HOM05D004252 ORTHO05D005101 2.7e-160 568.9 352 78.7
Lj1A1079G39 Lonicera japonica HOM05D004252 ORTHO05D005101 2.7e-160 568.9 360 78.1
Aqoxy5G01125 Aquilegia oxysepala HOM05D004252 ORTHO05D005101 6.1e-160 567.8 352 80.4
Medtr7g115190 Medicago truncatula HOM05D004252 ORTHO05D005101 6.1e-160 567.8 359 77.7
Phvul.006G101900 Phaseolus vulgaris HOM05D004252 ORTHO05D005101 8.0e-160 567.4 356 77.0
Glyma.03G247300 Glycine max HOM05D004252 ORTHO05D005101 3.0e-159 565.5 356 76.7
FAN02G2888 Fragaria x ananassa HOM05D004252 ORTHO05D005101 4.0e-159 565.1 362 76.8
Lj1g0020341 Lotus japonicus HOM05D004252 ORTHO05D005101 5.2e-159 564.7 359 76.6
Sed0025221 Sechium edule HOM05D004252 ORTHO05D005101 5.2e-159 564.7 355 77.5
Thhalv10019885m.g Eutrema salsugineum HOM05D004252 ORTHO05D005101 6.8e-159 564.3 349 78.2
FAN14G3887 Fragaria x ananassa HOM05D004252 ORTHO05D005101 8.8e-159 563.9 362 76.5
THA.LOC104818630 Tarenaya hassleriana HOM05D004252 ORTHO05D005101 1.5e-158 563.1 352 79.5
Cc02_g30700 Coffea canephora HOM05D004252 ORTHO05D005101 2.0e-158 562.8 360 77.8
FvH4_6g02880 Fragaria vesca HOM05D004252 ORTHO05D005101 2.0e-158 562.8 360 76.7
AUR62004951 Chenopodium quinoa HOM05D004252 ORTHO05D005101 2.6e-158 562.4 363 78.0
Aqoxy6G01279 Aquilegia oxysepala HOM05D004252 ORTHO05D005101 5.7e-158 561.2 360 76.9
FAN09G2874 Fragaria x ananassa HOM05D004252 ORTHO05D005101 1.3e-157 560.1 362 75.7
Aa31LG5G15140 Aethionema arabicum HOM05D004252 ORTHO05D005101 1.7e-157 559.7 349 78.8
PSO832G2970 Papaver somniferum HOM05D004252 ORTHO05D005101 2.2e-157 559.3 360 77.2
arahy.Tifrunner.gnm1.ann1.YD0KDM Arachis hypogaea HOM05D004252 ORTHO05D005101 2.8e-157 558.9 358 77.1
FAN05G2119 Fragaria x ananassa HOM05D004252 ORTHO05D005101 2.8e-157 558.9 362 76.0
PGR142G2894 Punica granatum HOM05D004252 ORTHO05D005101 4.8e-157 558.1 359 76.9
AT3G04740 Arabidopsis thaliana HOM05D004252 ORTHO05D005101 8.3e-157 557.4 349 77.9
Sc20g0000330 Simmondsia chinensis HOM05D004252 ORTHO05D005101 8.3e-157 557.4 355 76.6
HanXRQChr03g0080781 Helianthus annuus HOM05D004252 ORTHO05D005101 1.4e-156 556.6 362 76.0
Oeu027472.1 Olea europaea HOM05D004252 ORTHO05D005101 1.4e-156 556.6 361 76.7
PSO210G6431 Papaver somniferum HOM05D004252 ORTHO05D005101 1.8e-156 556.2 360 76.7
AL3G14870 Arabidopsis lyrata HOM05D004252 ORTHO05D005101 2.4e-156 555.8 349 77.7
arahy.Tifrunner.gnm1.ann1.QZ0BKE Arachis hypogaea HOM05D004252 ORTHO05D005101 4.1e-156 555.1 359 76.3
Sp3g03590 Schrenkiella parvula HOM05D004252 ORTHO05D005101 9.1e-156 553.9 348 77.3
THA.LOC104821672 Tarenaya hassleriana HOM05D004252 ORTHO05D005101 7.7e-155 550.8 352 77.3
EL10Ac4g09148 Beta vulgaris HOM05D004252 ORTHO05D005101 1.7e-154 549.7 363 75.2
DCAR_014751 Daucus carota HOM05D004252 ORTHO05D005101 2.3e-154 549.3 354 78.8
ECA240G2739 Erigeron canadensis HOM05D004252 ORTHO05D005101 6.6e-154 547.7 360 74.2
SalBow3G2512 Salvia bowleyana HOM05D004252 ORTHO05D005101 1.9e-153 546.2 361 75.1
HanXRQChr13g0411361 Helianthus annuus HOM05D004252 ORTHO05D005101 9.5e-153 543.9 362 74.6
Lalb_Chr04g0262241 Lupinus albus HOM05D004252 ORTHO05D005101 9.5e-153 543.9 359 73.8
arahy.Tifrunner.gnm1.ann1.795G7S Arachis hypogaea HOM05D004252 ORTHO05D005101 6.1e-152 541.2 359 75.2
Carub.0003s0391 Capsella rubella HOM05D004252 ORTHO05D005101 1.0e-151 540.4 346 76.9
DCAR_023243 Daucus carota HOM05D004252 ORTHO05D005101 1.4e-151 540.0 352 75.9
Lsat_1_v5_gn_5_53600 Lactuca sativa HOM05D004252 ORTHO05D005101 3.0e-151 538.9 356 75.3
Hund06974 Selenicereus undatus HOM05D004252 ORTHO05D005101 5.2e-151 538.1 364 72.8
A05p42820 Brassica napus HOM05D004252 ORTHO05D005101 2.6e-150 535.8 347 76.4
C05p62540 Brassica napus HOM05D004252 ORTHO05D005101 3.4e-150 535.4 347 76.7
BolC5t34909H Brassica oleracea HOM05D004252 ORTHO05D005101 3.4e-150 535.4 347 76.7
Medtr1g087060 Medicago truncatula HOM05D004252 ORTHO05D005101 4.4e-150 535.0 352 74.1
Migut.B01091 Erythranthe guttata HOM05D004252 ORTHO05D005101 5.7e-150 534.6 353 77.3
BraA05t22970Z Brassica rapa HOM05D004252 ORTHO05D005101 7.5e-150 534.3 347 76.4
Ah.06g192380 Amaranthus hybridus HOM05D004252 ORTHO05D005101 1.3e-149 533.5 363 73.6
unitig_699.g19676 Utricularia gibba HOM05D004252 ORTHO05D005101 4.5e-147 525.0 359 72.7
Sopen01g040990 Solanum pennellii HOM05D004252 ORTHO05D005101 9.5e-145 517.3 330 76.7
CDE06G0814 Ceratophyllum demersum HOM05D004252 ORTHO05D005101 1.8e-143 513.1 358 70.7
arahy.Tifrunner.gnm1.ann1.8T8W7S Arachis hypogaea HOM05D004252 ORTHO05D005101 1.2e-142 510.4 329 76.3
CDE02G2007 Ceratophyllum demersum HOM05D004252 ORTHO05D005101 9.8e-142 507.3 358 69.8
AUR62001006 Chenopodium quinoa HOM05D004252 ORTHO05D005101 4.6e-139 498.4 338 74.6
TPR.G6924 Trifolium pratense HOM05D004252 ORTHO05D005101 5.6e-137 491.5 359 68.5
Os08g0332800 Oryza sativa ssp. japonica HOM05D004252 ORTHO05D005101 1.6e-136 490.0 365 65.5
SHI18417 Sapria himalayana HOM05D004252 ORTHO05D005101 1.5e-134 483.4 359 66.9
ATR0665G632 Amborella trichopoda HOM05D004252 ORTHO05D005101 2.2e-133 479.6 347 68.9
BcaB04g19300 Brassica carinata HOM05D004252 ORTHO05D005101 1.7e-130 469.9 350 68.0
CiPaw.07G067400 Carya illinoinensis HOM05D004252 ORTHO05D005101 3.3e-129 465.7 360 66.9
HPP92_026425 Vanilla planifolia HOM05D004252 ORTHO05D005101 1.6e-128 463.4 360 63.6
Zm00001eb097360 Zea mays HOM05D004252 ORTHO05D005101 2.4e-124 449.5 347 63.4
Os09g0281900 Oryza sativa ssp. japonica HOM05D004252 ORTHO05D005101 4.6e-123 445.3 352 62.8
Mapoly0110s0011 Marchantia polymorpha HOM05D004252 ORTHO05D005101 1.6e-112 410.2 362 57.7
SMO118G0536 Selaginella moellendorffii HOM05D004252 ORTHO05D005101 4.9e-101 372.1 346 55.2
AagrBONN_evm.TU.Sc2ySwM_368.2529 Anthoceros agrestis HOM05D004252 ORTHO05D005101 2.7e-99 366.3 357 54.1
Pp3c9_4280 Physcomitrium patens HOM05D004252 ORTHO05D005101 1.3e-96 357.5 359 50.7
Pp3c9_5080 Physcomitrium patens HOM05D004252 ORTHO05D005101 1.8e-95 353.6 376 48.1
Oeu002657.3 Olea europaea HOM05D004252 ORTHO05D005101 6.1e-27 125.9 90 67.8
SEGI_18631 Sequoiadendron giganteum HOM05D000173 ORTHO05D006747 3.7e-24 116.7 118 54.2
Atru.chr2.826 Acer truncatum HOM05D004252 ORTHO05D005101 5.0e-21 106.3 53 96.2
arahy.Tifrunner.gnm1.ann1.82F4VT Arachis hypogaea HOM05D004252 ORTHO05D005101 1.5e-17 94.7 65 69.2
SEGI_17147 Sequoiadendron giganteum HOM05D004252 ORTHO05D005101 1.3e-16 91.7 66 71.2
MCO11G870 Micromonas commoda HOM05D004252 ORTHO05D005101 3.1e-10 70.5 131 30.5


User provided reference genes

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