Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c40554 Carica papaya HOM05D002762 ORTHO05D004643 3.0e-38 161.4 82 100.0
Atru.chr4.2693 Acer truncatum HOM05D002762 ORTHO05D004643 9.6e-21 103.2 82 64.6
Duzib151G0782 Durio zibethinus HOM05D002762 ORTHO05D004643 3.7e-20 101.3 82 58.5
CSS0041788 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D004643 6.2e-20 100.5 82 62.2
CSS0044156 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D004643 6.2e-20 100.5 82 62.2
Thecc.04G271300 Theobroma cacao HOM05D002762 ORTHO05D004643 8.1e-20 100.1 82 58.5
Actinidia40216 Actinidia chinensis HOM05D002762 ORTHO05D004643 1.1e-19 99.8 82 62.2
Ciclev10004705m.g Citrus clementina HOM05D002762 ORTHO05D004643 1.4e-19 99.4 84 60.7
CAN.G1247.4 Capsicum annuum HOM05D002762 ORTHO05D004643 6.9e-19 97.1 82 57.3
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 6.9e-19 97.1 82 59.8
Sopen06g019510 Solanum pennellii HOM05D002762 ORTHO05D004643 3.4e-18 94.7 82 54.9
PGSC0003DMG400030790 Solanum tuberosum HOM05D002762 ORTHO05D004643 3.4e-18 94.7 82 54.9
Peaxi162Scf00769g00116 Petunia axillaris HOM05D002762 ORTHO05D004643 4.5e-18 94.4 82 56.1
Solyc06g054440.2 Solanum lycopersicum HOM05D002762 ORTHO05D004643 4.5e-18 94.4 82 54.9
Duzib052G0700 Durio zibethinus HOM05D002762 ORTHO05D004643 5.8e-18 94.0 82 56.1
Rhsim04G0212100 Rhododendron simsii HOM05D002762 ORTHO05D004643 7.6e-18 93.6 82 59.8
vmacro08247 Vaccinium macrocarpon HOM05D002762 ORTHO05D004643 1.0e-17 93.2 82 58.5
VMungo0540G1770 Vigna mungo HOM05D002762 ORTHO05D004643 1.7e-17 92.4 79 62.0
Nitab4.5_0002295g0030 Nicotiana tabacum HOM05D002762 ORTHO05D004643 2.2e-17 92.0 82 54.9
Dinv44461 Davidia involucrata HOM05D002762 ORTHO05D004643 2.9e-17 91.7 82 58.5
Psat1g185320 Pisum sativum HOM05D002762 ORTHO05D004643 2.9e-17 91.7 78 60.3
arahy.Tifrunner.gnm1.ann1.6S26PP Arachis hypogaea HOM05D002762 ORTHO05D004643 3.8e-17 91.3 82 56.1
arahy.Tifrunner.gnm1.ann1.Q6K1JG Arachis hypogaea HOM05D002762 ORTHO05D004643 3.8e-17 91.3 82 56.1
Nitab4.5_0002594g0070 Nicotiana tabacum HOM05D002762 ORTHO05D004643 3.8e-17 91.3 82 56.1
Phvul.006G157700 Phaseolus vulgaris HOM05D002762 ORTHO05D004643 4.9e-17 90.9 79 59.5
Prupe.1G147900 Prunus persica HOM05D002762 ORTHO05D004643 6.5e-17 90.5 82 59.8
Thhalv10024700m.g Eutrema salsugineum HOM05D002762 ORTHO05D004643 8.4e-17 90.1 81 55.6
Hma1.2p1_2025F.1_g311500 Hydrangea macrophylla HOM05D002762 ORTHO05D004643 8.4e-17 90.1 81 54.3
COL.COLO4_13978 Corchorus olitorius HOM05D002762 ORTHO05D004643 1.1e-16 89.7 82 53.7
Ca_00594_v3 Cicer arietinum L. HOM05D002762 ORTHO05D004643 1.4e-16 89.4 78 60.3
Glyma.13G211600 Glycine max HOM05D002762 ORTHO05D004643 1.4e-16 89.4 79 60.8
Actinidia23462 Actinidia chinensis HOM05D002762 ORTHO05D004643 4.2e-16 87.8 82 56.1
HanXRQChr03g0079911 Helianthus annuus HOM05D002762 ORTHO05D004643 7.1e-16 87.0 82 53.7
TAR362G1268 Trochodendron aralioides HOM05D002762 ORTHO05D004643 9.3e-16 86.7 79 58.2
arahy.Tifrunner.gnm1.ann1.L75CTN Arachis hypogaea HOM05D002762 ORTHO05D004643 1.2e-15 86.3 74 55.4
Hma1.2p1_0511F.1_g169210 Hydrangea macrophylla HOM05D002762 ORTHO05D004643 1.2e-15 86.3 81 51.9
CANSAT78G1359 Cannabis sativa HOM05D002762 ORTHO05D004643 1.6e-15 85.9 82 57.3
ECA240G4644 Erigeron canadensis HOM05D002762 ORTHO05D004643 2.1e-15 85.5 82 51.2
Medtr2g021030 Medicago truncatula HOM05D002762 ORTHO05D004643 2.7e-15 85.1 84 56.0
Lsat_1_v5_gn_5_47620 Lactuca sativa HOM05D002762 ORTHO05D004643 3.5e-15 84.7 82 52.4
Lj3C805G9 Lonicera japonica HOM05D002762 ORTHO05D004643 3.5e-15 84.7 82 56.1
DCAR_030582 Daucus carota HOM05D002762 ORTHO05D004643 4.6e-15 84.3 78 48.7
Gohir.A09G231600 Gossypium hirsutum HOM05D002762 ORTHO05D004643 6.0e-15 84.0 82 50.0
Gohir.D09G232700 Gossypium hirsutum HOM05D002762 ORTHO05D004643 6.0e-15 84.0 82 50.0
Gorai.006G255600 Gossypium raimondii HOM05D002762 ORTHO05D004643 6.0e-15 84.0 82 50.0
Aa31LG9G1950 Aethionema arabicum HOM05D002762 ORTHO05D004643 7.9e-15 83.6 81 51.9
TWI73G1094 Tripterygium wilfordii HOM05D002762 ORTHO05D004643 7.9e-15 83.6 82 56.1
Carub.0007s2643 Capsella rubella HOM05D002762 ORTHO05D004643 1.0e-14 83.2 81 51.9
CiPaw.01G157300 Carya illinoinensis HOM05D002762 ORTHO05D004643 1.0e-14 83.2 80 57.5
arahy.Tifrunner.gnm1.ann1.EJ0XN1 Arachis hypogaea HOM05D002762 ORTHO05D004643 1.3e-14 82.8 74 54.1
Sp7g13700 Schrenkiella parvula HOM05D002762 ORTHO05D004643 1.3e-14 82.8 81 53.1
TPR.G18042 Trifolium pratense HOM05D002762 ORTHO05D004643 6.7e-14 80.5 84 54.8
Nn4g26135 Nelumbo nucifera HOM05D002762 ORTHO05D004643 8.7e-14 80.1 82 53.7
Cc03_g02820 Coffea canephora HOM05D002762 ORTHO05D004643 1.1e-13 79.7 82 51.2
Lj6g0020038 Lotus japonicus HOM05D002762 ORTHO05D004643 1.5e-13 79.3 83 50.6
Glyma.17G019800 Glycine max HOM05D002762 ORTHO05D004643 1.9e-13 79.0 61 62.3
Sed0001779 Sechium edule HOM05D002762 ORTHO05D004643 1.9e-13 79.0 78 56.4
CARHR222240 Cardamine hirsuta HOM05D002762 ORTHO05D004643 2.5e-13 78.6 81 50.6
THA.LOC104802549 Tarenaya hassleriana HOM05D002762 ORTHO05D004643 2.5e-13 78.6 74 56.8
Manes.03G187500 Manihot esculenta HOM05D002762 ORTHO05D004643 3.3e-13 78.2 82 56.1
GSVIVG01017859001 Vitis vinifera HOM05D002762 ORTHO05D004643 3.3e-13 78.2 82 50.0
RcHm_v2.0_Chr4g0419291 Rosa chinensis HOM05D002762 ORTHO05D004643 4.3e-13 77.8 72 56.9
Haze_01003 Corylus avellana HOM05D002762 ORTHO05D004643 5.7e-13 77.4 80 57.5
FvH4_4g14060 Fragaria vesca HOM05D002762 ORTHO05D004643 5.7e-13 77.4 73 58.9
FAN22G0648 Fragaria x ananassa HOM05D002762 ORTHO05D004643 5.7e-13 77.4 73 58.9
AL7G40070 Arabidopsis lyrata HOM05D002762 ORTHO05D004643 7.4e-13 77.0 60 66.7
FAN12G3553 Fragaria x ananassa HOM05D002762 ORTHO05D004643 7.4e-13 77.0 73 57.5
PGR031G1661 Punica granatum HOM05D002762 ORTHO05D004643 7.4e-13 77.0 81 53.1
AT4G15475 Arabidopsis thaliana HOM05D002762 ORTHO05D004643 1.3e-12 76.3 68 52.9
MD13G1179300 Malus domestica HOM05D002762 ORTHO05D004643 1.3e-12 76.3 82 53.7
MELO3C021388.2 Cucumis melo HOM05D002762 ORTHO05D004643 1.6e-12 75.9 51 68.6
CsaV3_6G005490 Cucumis sativus L. HOM05D002762 ORTHO05D004643 1.6e-12 75.9 51 68.6
Eucgr.B01185 Eucalyptus grandis HOM05D002762 ORTHO05D004643 1.6e-12 75.9 84 50.0
FAN17G2967 Fragaria x ananassa HOM05D002762 ORTHO05D004643 1.6e-12 75.9 73 57.5
Lalb_Chr20g0118281 Lupinus albus HOM05D002762 ORTHO05D004643 1.6e-12 75.9 82 53.7
QL06p006068 Quercus lobata HOM05D002762 ORTHO05D004643 1.6e-12 75.9 82 53.7
Cfa015545 Carpinus fangiana HOM05D002762 ORTHO05D004643 2.1e-12 75.5 80 56.2
Phvul.003G097600 Phaseolus vulgaris HOM05D002762 ORTHO05D004643 2.8e-12 75.1 73 50.7
MD16G1180300 Malus domestica HOM05D002762 ORTHO05D004643 4.8e-12 74.3 82 50.0
BcaC06g32936 Brassica carinata HOM05D002762 ORTHO05D004643 8.2e-12 73.6 68 51.5
ClCG06G005660 Citrullus lanatus HOM05D002762 ORTHO05D004643 1.8e-11 72.4 77 48.1
VMungo1215G0792 Vigna mungo HOM05D002762 ORTHO05D004643 1.8e-11 72.4 73 47.9
BcaC06g33410 Brassica carinata HOM05D002762 ORTHO05D004643 5.3e-11 70.9 68 55.9
C07p47170 Brassica napus HOM05D002762 ORTHO05D004643 5.3e-11 70.9 68 55.9
BolC7t45238H Brassica oleracea HOM05D002762 ORTHO05D004643 5.3e-11 70.9 68 55.9
A03p49130 Brassica napus HOM05D002762 ORTHO05D004643 1.5e-10 69.3 68 55.9
BraA03t14008Z Brassica rapa HOM05D002762 ORTHO05D004643 1.5e-10 69.3 68 55.9
HanXRQChr08g0226481 Helianthus annuus HOM05D002762 ORTHO05D004643 2.6e-10 68.6 80 48.8
MSTRG.3976 Avicennia marina HOM05D002762 ORTHO05D004643 5.8e-10 67.4 56 53.6
ATR0626G340 Amborella trichopoda HOM05D002762 ORTHO05D004643 1.0e-09 66.6 67 52.2
HanXRQChr11g0325871 Helianthus annuus HOM05D002762 ORTHO05D004643 1.3e-09 66.2 80 48.8
SalBow2G0360 Salvia bowleyana HOM05D002762 ORTHO05D004643 3.8e-09 64.7 63 47.6
SalBow2G3267 Salvia bowleyana HOM05D002762 ORTHO05D004643 3.8e-09 64.7 63 47.6
Sc19g0004700 Simmondsia chinensis HOM05D002762 ORTHO05D004643 6.5e-09 63.9 80 45.0
MBI19_g20287_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D004643 8.4e-09 63.5 71 49.3
CSS0016618 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D004643 1.4e-08 62.8 81 48.1
Migut.G00246 Erythranthe guttata HOM05D002762 ORTHO05D004643 1.4e-08 62.8 71 46.5
SGA_v2.0_scaffold237G43847 Striga asiatica HOM05D002762 ORTHO05D004643 2.5e-08 62.0 63 47.6
SMO228G0132 Selaginella moellendorffii HOM05D002762 ORTHO05D004643 1.2e-07 59.7 76 44.7
Glyma.07G254400 Glycine max HOM05D002762 ORTHO05D004643 1.6e-07 59.3 48 60.4
SEGI_13295 Sequoiadendron giganteum HOM05D002762 ORTHO05D004643 2.7e-07 58.5 74 47.3
Oeu056435.1 Olea europaea HOM05D002762 ORTHO05D004643 1.3e-06 56.2 49 57.1


User provided reference genes

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