Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c37318 Carica papaya HOM05D004692 ORTHO05D006291 1.2e-67 259.6 124 100.0
MD14G1218000 Malus domestica HOM05D004692 ORTHO05D006291 1.8e-47 192.6 94 89.4
RcHm_v2.0_Chr7g0184081 Rosa chinensis HOM05D004692 ORTHO05D006291 2.4e-47 192.2 94 90.4
MD06G1207500 Malus domestica HOM05D004692 ORTHO05D006291 6.9e-47 190.7 94 87.2
Atru.chr9.678 Acer truncatum HOM05D004692 ORTHO05D006291 3.4e-46 188.3 97 84.5
Thecc.03G112800 Theobroma cacao HOM05D004692 ORTHO05D006291 5.9e-46 187.6 94 87.2
C09p68780 Brassica napus HOM05D004692 ORTHO05D006291 1.0e-45 186.8 95 86.3
Ca_25716_v3 Cicer arietinum L. HOM05D004692 ORTHO05D006291 1.0e-45 186.8 94 88.3
FAN08G1512 Fragaria x ananassa HOM05D004692 ORTHO05D006291 1.0e-45 186.8 94 87.2
FAN13G2141 Fragaria x ananassa HOM05D004692 ORTHO05D006291 1.3e-45 186.4 94 86.2
GSVIVG01008185001 Vitis vinifera HOM05D004692 ORTHO05D006291 1.3e-45 186.4 94 87.2
Ca_21742_v3 Cicer arietinum L. HOM05D004692 ORTHO05D006291 1.7e-45 186.0 95 87.4
Dinv36841 Davidia involucrata HOM05D004692 ORTHO05D006291 2.2e-45 185.7 94 85.1
BcaB08g37277 Brassica carinata HOM05D004692 ORTHO05D006291 2.9e-45 185.3 95 86.3
Ciclev10020592m.g Citrus clementina HOM05D004692 ORTHO05D006291 2.9e-45 185.3 94 85.1
FvH4_5g13050 Fragaria vesca HOM05D004692 ORTHO05D006291 2.9e-45 185.3 94 86.2
FAN18G3467 Fragaria x ananassa HOM05D004692 ORTHO05D006291 2.9e-45 185.3 94 86.2
Prupe.5G211900 Prunus persica HOM05D004692 ORTHO05D006291 3.8e-45 184.9 94 86.2
Sed0023319 Sechium edule HOM05D004692 ORTHO05D006291 3.8e-45 184.9 94 85.1
SGA_v2.0_scaffold56G20037 Striga asiatica HOM05D004692 ORTHO05D006291 3.8e-45 184.9 94 85.1
Hund09942 Selenicereus undatus HOM05D004692 ORTHO05D006291 5.0e-45 184.5 93 86.0
ClCG06G015290 Citrullus lanatus HOM05D004692 ORTHO05D006291 6.5e-45 184.1 94 85.1
Peaxi162Scf00119g00017 Petunia axillaris HOM05D004692 ORTHO05D006291 6.5e-45 184.1 94 85.1
CiPaw.15G118000 Carya illinoinensis HOM05D004692 ORTHO05D006291 8.5e-45 183.7 94 86.2
Duzib205G0043 Durio zibethinus HOM05D004692 ORTHO05D006291 8.5e-45 183.7 94 85.1
Cc04_g07930 Coffea canephora HOM05D004692 ORTHO05D006291 1.1e-44 183.3 94 85.1
A10p28500 Brassica napus HOM05D004692 ORTHO05D006291 1.4e-44 183.0 93 84.9
Hund09975 Selenicereus undatus HOM05D004692 ORTHO05D006291 1.4e-44 183.0 93 84.9
TAR374G0590 Trochodendron aralioides HOM05D004692 ORTHO05D006291 2.5e-44 182.2 93 82.8
Migut.J01255 Erythranthe guttata HOM05D004692 ORTHO05D006291 3.2e-44 181.8 94 84.0
TPR.G2028 Trifolium pratense HOM05D004692 ORTHO05D006291 3.2e-44 181.8 94 85.1
Lj5A139T82 Lonicera japonica HOM05D004692 ORTHO05D006291 4.2e-44 181.4 94 81.9
C03p04140 Brassica napus HOM05D004692 ORTHO05D006291 5.5e-44 181.0 93 86.0
BolC3t12946H Brassica oleracea HOM05D004692 ORTHO05D006291 5.5e-44 181.0 93 84.9
Haze_18550 Corylus avellana HOM05D004692 ORTHO05D006291 5.5e-44 181.0 94 86.2
arahy.Tifrunner.gnm1.ann1.51KNRK Arachis hypogaea HOM05D004692 ORTHO05D006291 7.2e-44 180.6 93 82.8
EL10Ac5g11213 Beta vulgaris HOM05D004692 ORTHO05D006291 7.2e-44 180.6 93 82.8
A03p03660 Brassica napus HOM05D004692 ORTHO05D006291 7.2e-44 180.6 93 86.0
Thhalv10013807m.g Eutrema salsugineum HOM05D004692 ORTHO05D006291 7.2e-44 180.6 93 84.9
Hma1.2p1_0744F.1_g211680 Hydrangea macrophylla HOM05D004692 ORTHO05D006291 7.2e-44 180.6 94 85.1
MELO3C017264.2 Cucumis melo HOM05D004692 ORTHO05D006291 9.4e-44 180.3 94 83.0
Lalb_Chr13g0302611 Lupinus albus HOM05D004692 ORTHO05D006291 9.4e-44 180.3 97 79.4
THA.LOC104819389 Tarenaya hassleriana HOM05D004692 ORTHO05D006291 9.4e-44 180.3 93 82.8
TWI81G0688 Tripterygium wilfordii HOM05D004692 ORTHO05D006291 1.2e-43 179.9 94 81.9
Actinidia01418 Actinidia chinensis HOM05D004692 ORTHO05D006291 1.6e-43 179.5 97 81.4
Actinidia10430 Actinidia chinensis HOM05D004692 ORTHO05D006291 1.6e-43 179.5 94 84.0
Ah.11g047310 Amaranthus hybridus HOM05D004692 ORTHO05D006291 1.6e-43 179.5 93 81.7
QL10p021836 Quercus lobata HOM05D004692 ORTHO05D006291 1.6e-43 179.5 94 86.2
BcaNung05091 Brassica carinata HOM05D004692 ORTHO05D006291 2.1e-43 179.1 92 83.7
AUR62036914 Chenopodium quinoa HOM05D004692 ORTHO05D006291 2.1e-43 179.1 93 81.7
Manes.01G023900 Manihot esculenta HOM05D004692 ORTHO05D006291 2.1e-43 179.1 93 83.9
Medtr4g112810 Medicago truncatula HOM05D004692 ORTHO05D006291 2.1e-43 179.1 94 81.9
BraA03t09714Z Brassica rapa HOM05D004692 ORTHO05D006291 2.7e-43 178.7 93 84.9
CARHR205010 Cardamine hirsuta HOM05D004692 ORTHO05D006291 2.7e-43 178.7 93 86.0
CsaV3_1G003170 Cucumis sativus L. HOM05D004692 ORTHO05D006291 2.7e-43 178.7 94 81.9
vmacro17655 Vaccinium macrocarpon HOM05D004692 ORTHO05D006291 2.7e-43 178.7 93 82.8
Ah.02g120970 Amaranthus hybridus HOM05D004692 ORTHO05D006291 3.6e-43 178.3 93 80.6
CSS0001909 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 3.6e-43 178.3 94 80.9
CSS0041638 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 3.6e-43 178.3 94 80.9
QL10p021731 Quercus lobata HOM05D004692 ORTHO05D006291 3.6e-43 178.3 94 85.1
Rhsim08G0150000 Rhododendron simsii HOM05D004692 ORTHO05D006291 3.6e-43 178.3 94 81.9
Eucgr.B00659 Eucalyptus grandis HOM05D004692 ORTHO05D006291 4.6e-43 177.9 94 83.0
Psat4g044040 Pisum sativum HOM05D004692 ORTHO05D006291 4.6e-43 177.9 94 83.0
Phvul.003G180900 Phaseolus vulgaris HOM05D004692 ORTHO05D006291 6.1e-43 177.6 94 81.9
arahy.Tifrunner.gnm1.ann1.6286TX Arachis hypogaea HOM05D004692 ORTHO05D006291 7.9e-43 177.2 93 82.8
CANSAT80G0730 Cannabis sativa HOM05D004692 ORTHO05D006291 1.0e-42 176.8 92 80.4
Nn4g23609 Nelumbo nucifera HOM05D004692 ORTHO05D006291 1.0e-42 176.8 91 83.5
Sp6g34780 Schrenkiella parvula HOM05D004692 ORTHO05D006291 1.0e-42 176.8 93 82.8
arahy.Tifrunner.gnm1.ann1.F96WR3 Arachis hypogaea HOM05D004692 ORTHO05D006291 1.4e-42 176.4 93 81.7
Nitab4.5_0007617g0010 Nicotiana tabacum HOM05D004692 ORTHO05D006291 1.4e-42 176.4 94 80.9
ECA232G0381 Erigeron canadensis HOM05D004692 ORTHO05D006291 2.3e-42 175.6 94 79.8
Gohir.D07G062400 Gossypium hirsutum HOM05D004692 ORTHO05D006291 2.3e-42 175.6 94 79.8
Gorai.001G065900 Gossypium raimondii HOM05D004692 ORTHO05D006291 2.3e-42 175.6 94 79.8
Oeu058039.1 Olea europaea HOM05D004692 ORTHO05D006291 2.3e-42 175.6 94 81.9
HanXRQChr16g0501991 Helianthus annuus HOM05D004692 ORTHO05D006291 3.0e-42 175.3 93 79.6
Lsat_1_v5_gn_4_112840 Lactuca sativa HOM05D004692 ORTHO05D006291 3.0e-42 175.3 94 77.7
unitig_26.g9673 Utricularia gibba HOM05D004692 ORTHO05D006291 3.0e-42 175.3 92 80.4
Aa31LG3G18370 Aethionema arabicum HOM05D004692 ORTHO05D006291 3.9e-42 174.9 94 80.9
AT5G08170 Arabidopsis thaliana HOM05D004692 ORTHO05D006291 6.7e-42 174.1 93 81.7
Carub.0006s0707 Capsella rubella HOM05D004692 ORTHO05D006291 6.7e-42 174.1 93 81.7
Gohir.A07G057600 Gossypium hirsutum HOM05D004692 ORTHO05D006291 6.7e-42 174.1 94 78.7
Lj4g0008523 Lotus japonicus HOM05D004692 ORTHO05D006291 6.7e-42 174.1 94 79.8
PSO017G3616 Papaver somniferum HOM05D004692 ORTHO05D006291 6.7e-42 174.1 94 78.7
AL6G18560 Arabidopsis lyrata HOM05D004692 ORTHO05D006291 8.8e-42 173.7 93 81.7
MBI14_g16236_MAGBIO Magnolia biondii HOM05D004692 ORTHO05D006291 8.8e-42 173.7 91 81.3
CAN.G471.4 Capsicum annuum HOM05D004692 ORTHO05D006291 1.1e-41 173.3 94 79.8
Glyma.17G083400 Glycine max HOM05D004692 ORTHO05D006291 1.1e-41 173.3 91 81.3
Potri.015G055300 Populus trichocarpa HOM05D004692 ORTHO05D006291 1.1e-41 173.3 94 77.7
Aqoxy3G00609 Aquilegia oxysepala HOM05D004692 ORTHO05D006291 2.0e-41 172.6 93 76.3
Nitab4.5_0000208g0050 Nicotiana tabacum HOM05D004692 ORTHO05D006291 2.0e-41 172.6 94 79.8
CDE06G1750 Ceratophyllum demersum HOM05D004692 ORTHO05D006291 2.5e-41 172.2 91 80.2
AUR62032158 Chenopodium quinoa HOM05D004692 ORTHO05D006291 2.5e-41 172.2 93 78.5
DCAR_015115 Daucus carota HOM05D004692 ORTHO05D006291 2.5e-41 172.2 94 75.5
DCAR_015116 Daucus carota HOM05D004692 ORTHO05D006291 2.5e-41 172.2 94 75.5
Zm00001eb424480 Zea mays HOM05D004692 ORTHO05D006291 2.5e-41 172.2 91 81.3
CSS0021853 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 3.3e-41 171.8 96 76.0
CSS0018290 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 4.3e-41 171.4 94 76.6
PGSC0003DMG400000653 Solanum tuberosum HOM05D004692 ORTHO05D006291 4.3e-41 171.4 94 79.8
MSTRG.22946 Avicennia marina HOM05D004692 ORTHO05D006291 5.7e-41 171.0 94 74.5
HanXRQChr16g0501981 Helianthus annuus HOM05D004692 ORTHO05D006291 5.7e-41 171.0 91 81.3
Sc12g0006990 Simmondsia chinensis HOM05D004692 ORTHO05D006291 5.7e-41 171.0 94 80.9
Solyc12g038970.3 Solanum lycopersicum HOM05D004692 ORTHO05D006291 7.4e-41 170.6 94 78.7
Sopen12g019180 Solanum pennellii HOM05D004692 ORTHO05D006291 7.4e-41 170.6 94 78.7
PSO478G1466 Papaver somniferum HOM05D004692 ORTHO05D006291 9.7e-41 170.2 94 76.6
Sabra15G0080100 Salix brachista HOM05D004692 ORTHO05D006291 3.7e-40 168.3 94 77.7
Sc12g0006960 Simmondsia chinensis HOM05D004692 ORTHO05D006291 3.7e-40 168.3 102 71.6
CSS0048768 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 6.3e-40 167.5 92 77.2
PGR083G2684 Punica granatum HOM05D004692 ORTHO05D006291 6.3e-40 167.5 94 73.4
CDE07G1308 Ceratophyllum demersum HOM05D004692 ORTHO05D006291 8.2e-40 167.2 91 78.0
Os04g0466600 Oryza sativa ssp. japonica HOM05D004692 ORTHO05D006291 1.4e-39 166.4 91 74.7
VMungo1215G1525 Vigna mungo HOM05D004692 ORTHO05D006291 3.1e-39 165.2 93 78.5
Pp3c14_21790 Physcomitrium patens HOM05D004692 ORTHO05D006291 5.3e-39 164.5 98 73.5
HPP92_019130 Vanilla planifolia HOM05D004692 ORTHO05D006291 6.9e-39 164.1 94 73.4
HPP92_019140 Vanilla planifolia HOM05D004692 ORTHO05D006291 6.9e-39 164.1 94 73.4
ATR0691G179 Amborella trichopoda HOM05D004692 ORTHO05D006291 2.0e-38 162.5 92 75.0
SalBow5G2075 Salvia bowleyana HOM05D004692 ORTHO05D006291 4.5e-38 161.4 104 70.2
SMO115G0272 Selaginella moellendorffii HOM05D004692 ORTHO05D006291 1.7e-37 159.5 95 69.5
BcaB01g05624 Brassica carinata HOM05D004692 ORTHO05D006291 3.2e-36 155.2 80 85.0
Mapoly0016s0188 Marchantia polymorpha HOM05D004692 ORTHO05D006291 3.2e-36 155.2 91 71.4
AagrBONN_evm.TU.Sc2ySwM_117.2364 Anthoceros agrestis HOM05D004692 ORTHO05D006291 4.2e-36 154.8 91 71.4
BolC9t59625H Brassica oleracea HOM05D004692 ORTHO05D006291 5.5e-36 154.5 76 88.2
SHI18993 Sapria himalayana HOM05D004692 ORTHO05D006291 9.4e-36 153.7 103 67.0
BraA10t44898Z Brassica rapa HOM05D004692 ORTHO05D006291 2.7e-35 152.1 76 85.5
arahy.Tifrunner.gnm1.ann1.RJWR3V Arachis hypogaea HOM05D004692 ORTHO05D006291 6.1e-35 151.0 93 71.0
CBR_g22406 Chara braunii HOM05D004692 ORTHO05D006291 6.1e-35 151.0 92 71.7
Lsat_1_v5_gn_5_119361 Lactuca sativa HOM05D004692 ORTHO05D006291 7.9e-35 150.6 94 69.1
CSS0026593 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 2.3e-34 149.1 79 79.7
CSS0041488 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 4.4e-33 144.8 77 79.2
Ca_29974_v3 Cicer arietinum L. HOM05D000837 ORTHO05D008386 3.2e-28 128.6 67 85.1
Pp3c13_22750 Physcomitrium patens HOM05D004692 ORTHO05D006291 7.2e-28 127.5 97 57.7
Cre01.g009350 Chlamydomonas reinhardtii HOM05D004692 ORTHO05D006291 2.9e-21 105.5 93 50.5
PRCOL_00005028 Prasinoderma coloniale HOM05D004692 ORTHO05D006291 8.5e-21 104.0 95 49.5
FAN04G1239 Fragaria x ananassa HOM05D004692 ORTHO05D006291 4.2e-20 101.7 64 75.0
Cre01.g053300 Chlamydomonas reinhardtii HOM05D004692 ORTHO05D006291 1.5e-17 93.2 92 45.7
Medtr4g110140 Medicago truncatula HOM05D004692 ORTHO05D006291 4.4e-17 91.7 54 70.4
arahy.Tifrunner.gnm1.ann1.U185V9 Arachis hypogaea HOM05D004692 ORTHO05D006291 1.2e-11 73.6 30 93.3
Hund10163 Selenicereus undatus HOM05D004692 ORTHO05D006291 1.0e-10 70.5 40 80.0


User provided reference genes

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