Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c35493 Carica papaya HOM05D000951 ORTHO05D001597 2.8e-51 204.9 97 100.0
Hma1.2p1_0665F.1_g199140 Hydrangea macrophylla HOM05D000951 ORTHO05D001597 1.2e-33 146.4 97 70.1
Ciclev10008900m.g Citrus clementina HOM05D000951 ORTHO05D001597 2.0e-33 145.6 97 69.1
TWI34G0260 Tripterygium wilfordii HOM05D000951 ORTHO05D001597 7.6e-33 143.7 97 68.0
Atru.chr7.1199 Acer truncatum HOM05D000951 ORTHO05D001597 4.9e-32 141.0 97 67.0
Actinidia22002 Actinidia chinensis HOM05D000951 ORTHO05D001597 7.1e-31 137.1 95 67.4
Nn8g39389 Nelumbo nucifera HOM05D000951 ORTHO05D001597 9.3e-31 136.7 95 67.4
Dinv36545 Davidia involucrata HOM05D000951 ORTHO05D001597 1.6e-30 136.0 95 66.3
GSVIVG01015504001 Vitis vinifera HOM05D000951 ORTHO05D001597 1.0e-29 133.3 95 69.5
CSS0016952 Camellia sinensis var. sinensis HOM05D000951 ORTHO05D001597 1.3e-29 132.9 95 65.3
CSS0049606 Camellia sinensis var. sinensis HOM05D000951 ORTHO05D001597 1.3e-29 132.9 95 65.3
QL02p087833 Quercus lobata HOM05D000951 ORTHO05D001597 3.9e-29 131.3 100 63.0
TAR625G0129 Trochodendron aralioides HOM05D000951 ORTHO05D001597 6.7e-29 130.6 95 62.1
PGR102G2134 Punica granatum HOM05D000951 ORTHO05D001597 1.1e-28 129.8 97 63.9
COL.COLO4_05763 Corchorus olitorius HOM05D000951 ORTHO05D001597 1.5e-28 129.4 97 66.0
TWI63G0382 Tripterygium wilfordii HOM05D000951 ORTHO05D001597 1.5e-28 129.4 97 61.9
Manes.14G130700 Manihot esculenta HOM05D000951 ORTHO05D001597 2.5e-28 128.6 97 66.0
PSO455G0024 Papaver somniferum HOM05D000951 ORTHO05D001597 4.3e-28 127.9 93 59.1
PSO170G4324 Papaver somniferum HOM05D000951 ORTHO05D001597 7.4e-28 127.1 93 59.1
HanXRQChr12g0356351 Helianthus annuus HOM05D000951 ORTHO05D001597 9.6e-28 126.7 93 62.4
Prupe.7G239800 Prunus persica HOM05D000951 ORTHO05D001597 1.3e-27 126.3 93 64.5
Duzib150G0417 Durio zibethinus HOM05D000951 ORTHO05D001597 2.8e-27 125.2 97 66.0
Thecc.09G123300 Theobroma cacao HOM05D000951 ORTHO05D001597 2.8e-27 125.2 97 66.0
MD02G1035100 Malus domestica HOM05D000951 ORTHO05D001597 3.7e-27 124.8 95 63.2
Lsat_1_v5_gn_5_97060 Lactuca sativa HOM05D000951 ORTHO05D001597 6.2e-27 124.0 93 60.2
Carub.0006s1846 Capsella rubella HOM05D000951 ORTHO05D001597 1.4e-26 122.9 97 64.9
AL6G31630 Arabidopsis lyrata HOM05D000951 ORTHO05D001597 1.8e-26 122.5 97 63.9
AT5G20080 Arabidopsis thaliana HOM05D000951 ORTHO05D001597 1.8e-26 122.5 97 63.9
MD00G1107200 Malus domestica HOM05D000951 ORTHO05D001597 2.4e-26 122.1 95 61.1
CARHR192750 Cardamine hirsuta HOM05D000951 ORTHO05D001597 5.3e-26 120.9 97 66.0
Manes.06G049900 Manihot esculenta HOM05D000951 ORTHO05D001597 5.3e-26 120.9 97 60.8
Aa31LG6G8050 Aethionema arabicum HOM05D000951 ORTHO05D001597 6.9e-26 120.6 97 62.9
Duzib168G1010 Durio zibethinus HOM05D000951 ORTHO05D001597 6.9e-26 120.6 97 63.9
Eucgr.C01134 Eucalyptus grandis HOM05D000951 ORTHO05D001597 6.9e-26 120.6 97 57.7
Sp6g24330 Schrenkiella parvula HOM05D000951 ORTHO05D001597 1.5e-25 119.4 97 61.9
Gohir.D06G055600 Gossypium hirsutum HOM05D000951 ORTHO05D001597 2.0e-25 119.0 97 63.9
Gohir.A06G057300 Gossypium hirsutum HOM05D000951 ORTHO05D001597 2.6e-25 118.6 97 63.9
Thhalv10014199m.g Eutrema salsugineum HOM05D000951 ORTHO05D001597 7.6e-25 117.1 97 60.8
Potri.006G218600 Populus trichocarpa HOM05D000951 ORTHO05D001597 1.3e-24 116.3 97 61.9
Hund09143 Selenicereus undatus HOM05D000951 ORTHO05D001597 1.3e-24 116.3 93 57.0
THA.LOC104799648 Tarenaya hassleriana HOM05D000951 ORTHO05D001597 2.2e-24 115.5 99 61.6
Gorai.010G064900 Gossypium raimondii HOM05D000951 ORTHO05D001597 3.8e-24 114.8 97 61.9
Rhsim01G0076500 Rhododendron simsii HOM05D000951 ORTHO05D001597 4.9e-24 114.4 138 45.7
BcaB01g04810 Brassica carinata HOM05D000951 ORTHO05D001597 6.4e-24 114.0 97 59.8
CiPaw.03G242000 Carya illinoinensis HOM05D000951 ORTHO05D001597 6.4e-24 114.0 90 62.2
ClCG11G002910 Citrullus lanatus HOM05D000951 ORTHO05D001597 8.4e-24 113.6 95 61.1
RcHm_v2.0_Chr2g0089111 Rosa chinensis HOM05D000951 ORTHO05D001597 3.2e-23 111.7 99 57.6
AUR62033478 Chenopodium quinoa HOM05D000951 ORTHO05D001597 4.2e-23 111.3 94 58.5
CANSAT11G2446 Cannabis sativa HOM05D000951 ORTHO05D001597 5.5e-23 110.9 95 57.9
FAN28G2833 Fragaria x ananassa HOM05D000951 ORTHO05D001597 5.5e-23 110.9 96 59.4
AUR62011089 Chenopodium quinoa HOM05D000951 ORTHO05D001597 7.1e-23 110.5 94 58.5
Sabra06G0168500 Salix brachista HOM05D000951 ORTHO05D001597 9.3e-23 110.2 97 56.7
BraA03t10295Z Brassica rapa HOM05D004174 ORTHO05D004624 1.2e-22 109.8 97 58.8
Lalb_Chr12g0197821 Lupinus albus HOM05D000951 ORTHO05D001597 4.6e-22 107.8 96 53.1
arahy.Tifrunner.gnm1.ann1.34G2NL Arachis hypogaea HOM05D000951 ORTHO05D001597 1.8e-21 105.9 98 49.0
arahy.Tifrunner.gnm1.ann1.YZT8QC Arachis hypogaea HOM05D000951 ORTHO05D001597 1.8e-21 105.9 98 49.0
A03p09800 Brassica napus HOM05D004174 ORTHO05D004624 1.8e-21 105.9 97 56.7
MSTRG.19606 Avicennia marina HOM05D000951 ORTHO05D001597 2.3e-21 105.5 95 53.7
FvH4_1g03580 Fragaria vesca HOM05D000951 ORTHO05D001597 2.3e-21 105.5 97 58.8
FAN19G0775 Fragaria x ananassa HOM05D000951 ORTHO05D001597 2.3e-21 105.5 97 58.8
Nitab4.5_0004801g0060 Nicotiana tabacum HOM05D000951 ORTHO05D001597 3.0e-21 105.1 97 55.7
CsaV3_2G002740 Cucumis sativus L. HOM05D000951 ORTHO05D001597 5.1e-21 104.4 95 55.8
Nitab4.5_0001438g0140 Nicotiana tabacum HOM05D000951 ORTHO05D001597 5.1e-21 104.4 97 55.7
Oeu058063.1 Olea europaea HOM05D000951 ORTHO05D001597 5.1e-21 104.4 95 56.8
Sc18g0000690 Simmondsia chinensis HOM05D000951 ORTHO05D001597 5.1e-21 104.4 93 52.7
VMungo1215G2224 Vigna mungo HOM05D000951 ORTHO05D001597 8.7e-21 103.6 95 52.6
Migut.J01171 Erythranthe guttata HOM05D000951 ORTHO05D001597 1.1e-20 103.2 97 56.7
Lj4g0001261 Lotus japonicus HOM05D000951 ORTHO05D001597 2.5e-20 102.1 97 54.6
Solyc05g018520.3 Solanum lycopersicum HOM05D000951 ORTHO05D001597 2.5e-20 102.1 95 54.7
Sopen05g015640 Solanum pennellii HOM05D000951 ORTHO05D001597 2.5e-20 102.1 95 54.7
CAN.G44.5 Capsicum annuum HOM05D000951 ORTHO05D001597 3.3e-20 101.7 90 54.4
Aqoxy7G02098 Aquilegia oxysepala HOM05D000951 ORTHO05D001597 5.6e-20 100.9 95 51.6
Peaxi162Scf01400g00021 Petunia axillaris HOM05D000951 ORTHO05D001597 5.6e-20 100.9 95 52.6
Ca_21695_v3 Cicer arietinum L. HOM05D000951 ORTHO05D001597 9.6e-20 100.1 97 52.6
MELO3C004519.2 Cucumis melo HOM05D000951 ORTHO05D001597 9.6e-20 100.1 96 53.1
Phvul.003G162900 Phaseolus vulgaris HOM05D000951 ORTHO05D001597 2.1e-19 99.0 95 50.5
Medtr4g114030 Medicago truncatula HOM05D000951 ORTHO05D001597 3.7e-19 98.2 97 51.5
vmacro20598 Vaccinium macrocarpon HOM05D000951 ORTHO05D001597 4.8e-19 97.8 129 45.0
AUR62011110 Chenopodium quinoa HOM05D000951 ORTHO05D001597 6.2e-19 97.4 94 54.3
Cc06_g08770 Coffea canephora HOM05D000951 ORTHO05D001597 6.2e-19 97.4 97 49.5
Lalb_Chr07g0178811 Lupinus albus HOM05D000951 ORTHO05D001597 1.1e-18 96.7 99 46.5
AUR62011088 Chenopodium quinoa HOM05D000951 ORTHO05D001597 1.4e-18 96.3 94 53.2
Glyma.05G008100 Glycine max HOM05D000951 ORTHO05D001597 1.4e-18 96.3 95 48.4
TPR.G10690 Trifolium pratense HOM05D002931 ORTHO05D001597 1.4e-18 96.3 92 53.3
Psat4g040440 Pisum sativum HOM05D000951 ORTHO05D001597 2.4e-18 95.5 97 51.5
EL10Ac8g18618 Beta vulgaris HOM05D000951 ORTHO05D001597 1.5e-17 92.8 95 48.4
Glyma.17G116400 Glycine max HOM05D000951 ORTHO05D001597 4.9e-16 87.8 95 44.2
FAN23G0118 Fragaria x ananassa HOM05D000951 ORTHO05D001597 8.4e-16 87.0 96 53.1
Sed0014084 Sechium edule HOM05D000951 ORTHO05D001597 8.4e-16 87.0 96 51.0
HPP92_005148 Vanilla planifolia HOM05D000951 ORTHO05D001597 4.6e-14 81.3 96 43.8
Sed0017233 Sechium edule HOM05D000951 ORTHO05D001597 5.1e-13 77.8 95 43.2
Lj7A632G44 Lonicera japonica HOM05D000951 ORTHO05D045063 8.7e-13 77.0 70 55.7
Oeu058057.2 Olea europaea HOM05D000951 ORTHO05D001597 1.6e-11 72.8 70 50.0
ATR1156G037 Amborella trichopoda HOM05D000951 ORTHO05D001597 2.2e-11 72.4 107 39.3
Zm00001eb122720 Zea mays HOM05D000951 ORTHO05D001597 6.3e-11 70.9 68 51.5
MD02G1035400 Malus domestica HOM05D004174 ORTHO05D004624 8.2e-11 70.5 69 50.7
unitig_744.g23958 Utricularia gibba HOM05D000951 ORTHO05D001597 2.4e-10 68.9 73 49.3
Gorai.004G277800 Gossypium raimondii HOM05D000951 ORTHO05D001597 5.3e-10 67.8 127 37.0
SGA_v2.0_scaffold229G43326 Striga asiatica HOM05D000951 ORTHO05D001597 1.2e-09 66.6 136 33.8
Gohir.D08G259950 Gossypium hirsutum HOM05D000951 ORTHO05D001597 1.5e-09 66.2 121 37.2
Haze_25612 Corylus avellana HOM05D002931 ORTHO05D001597 5.9e-09 64.3 57 54.4
Os01g0174300 Oryza sativa ssp. japonica HOM05D000951 ORTHO05D001597 1.9e-07 59.3 67 43.3
Aqoxy7G02149 Aquilegia oxysepala HOM05D000951 ORTHO05D077320 2.5e-07 58.9 39 69.2


User provided reference genes

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