Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c34848 Carica papaya HOM05D002827 ORTHO05D003148 8.3e-60 233.4 110 100.0
C06p52810 Brassica napus HOM05D002827 ORTHO05D003148 4.3e-32 141.4 112 62.5
Aa31LG4G2090 Aethionema arabicum HOM05D002827 ORTHO05D003148 2.1e-31 139.0 110 63.6
Sp5g33930 Schrenkiella parvula HOM05D002827 ORTHO05D003148 8.1e-31 137.1 115 61.7
BraA07t31916Z Brassica rapa HOM05D002827 ORTHO05D003148 1.4e-30 136.3 112 60.7
THA.LOC104813628 Tarenaya hassleriana HOM05D002827 ORTHO05D003148 1.8e-30 136.0 112 61.6
AT1G78910 Arabidopsis thaliana HOM05D002827 ORTHO05D003148 3.1e-30 135.2 111 59.5
Carub.0002s2574 Capsella rubella HOM05D002827 ORTHO05D003148 6.8e-30 134.0 111 59.5
Thhalv10018480m.g Eutrema salsugineum HOM05D002827 ORTHO05D003148 2.0e-29 132.5 112 61.6
CARHR072500 Cardamine hirsuta HOM05D002827 ORTHO05D003148 2.6e-29 132.1 116 62.1
BcaC08g47442 Brassica carinata HOM05D002827 ORTHO05D003148 3.4e-29 131.7 113 61.1
BcaC08g47443 Brassica carinata HOM05D002827 ORTHO05D003148 3.4e-29 131.7 113 61.1
BolC6t40298H Brassica oleracea HOM05D002827 ORTHO05D003148 3.4e-29 131.7 113 61.1
AL2G39330 Arabidopsis lyrata HOM05D002827 ORTHO05D003148 4.4e-29 131.3 111 60.4
A07p44080 Brassica napus HOM05D002827 ORTHO05D003148 2.2e-28 129.0 112 60.7
BcaB03g16051 Brassica carinata HOM05D002827 ORTHO05D003148 6.4e-28 127.5 110 60.0
ClCG08G010750 Citrullus lanatus HOM05D002827 ORTHO05D003148 2.4e-27 125.6 104 62.5
Atru.chr1.2642 Acer truncatum HOM05D002827 ORTHO05D003148 3.2e-27 125.2 110 59.1
Dinv14559 Davidia involucrata HOM05D002827 ORTHO05D003148 3.2e-27 125.2 109 65.1
CSS0037439 Camellia sinensis var. sinensis HOM05D002827 ORTHO05D003148 5.4e-27 124.4 99 63.6
MD06G1108500 Malus domestica HOM05D002827 ORTHO05D003148 5.4e-27 124.4 114 57.9
QL02p030245 Quercus lobata HOM05D002827 ORTHO05D003148 5.4e-27 124.4 114 60.5
CsaV3_2G033400 Cucumis sativus L. HOM05D002827 ORTHO05D003148 4.6e-26 121.3 104 62.5
Actinidia06294 Actinidia chinensis HOM05D002827 ORTHO05D003148 1.0e-25 120.2 114 58.8
COL.COLO4_31142 Corchorus olitorius HOM05D002827 ORTHO05D003148 1.0e-25 120.2 103 62.1
MELO3C008111.2 Cucumis melo HOM05D002827 ORTHO05D003148 1.0e-25 120.2 104 62.5
AUR62025674 Chenopodium quinoa HOM05D002827 ORTHO05D003148 2.3e-25 119.0 101 61.4
Gohir.D05G115600 Gossypium hirsutum HOM05D002827 ORTHO05D003148 3.9e-25 118.2 101 63.4
Gorai.009G119600 Gossypium raimondii HOM05D002827 ORTHO05D003148 3.9e-25 118.2 101 63.4
TAR625G1524 Trochodendron aralioides HOM05D002827 ORTHO05D003148 3.9e-25 118.2 102 60.8
Duzib235G1501 Durio zibethinus HOM05D002827 ORTHO05D003148 5.1e-25 117.9 101 60.4
Sed0018704 Sechium edule HOM05D002827 ORTHO05D003148 5.1e-25 117.9 104 60.6
TWI18G1132 Tripterygium wilfordii HOM05D002827 ORTHO05D003148 6.6e-25 117.5 116 56.0
GSVIVG01029556001 Vitis vinifera HOM05D002827 ORTHO05D003148 6.6e-25 117.5 114 57.0
Ciclev10031422m.g Citrus clementina HOM05D002827 ORTHO05D003148 1.5e-24 116.3 111 57.7
FAN18G2235 Fragaria x ananassa HOM05D002827 ORTHO05D003148 1.5e-24 116.3 102 58.8
TAR383G0889 Trochodendron aralioides HOM05D002827 ORTHO05D003148 4.3e-24 114.8 102 59.8
ECA234G3082 Erigeron canadensis HOM05D002827 ORTHO05D003148 5.6e-24 114.4 94 61.7
CANSAT21G0155 Cannabis sativa HOM05D002827 ORTHO05D003148 7.3e-24 114.0 94 62.8
Rhsim01G0185500 Rhododendron simsii HOM05D001240 ORTHO05D002450 7.3e-24 114.0 103 60.2
ECA248G2378 Erigeron canadensis HOM05D002827 ORTHO05D003148 2.1e-23 112.5 94 60.6
Manes.06G035900 Manihot esculenta HOM05D002827 ORTHO05D003148 2.8e-23 112.1 98 63.3
Manes.06G179501 Manihot esculenta HOM05D002827 ORTHO05D003148 2.8e-23 112.1 94 63.8
AUR62001330 Chenopodium quinoa HOM05D002827 ORTHO05D003148 1.1e-22 110.2 94 61.7
Hund05671 Selenicereus undatus HOM05D002827 ORTHO05D003148 1.1e-22 110.2 97 62.9
Lsat_1_v5_gn_9_71340 Lactuca sativa HOM05D002827 ORTHO05D004512 1.8e-22 109.4 91 60.4
Manes.08G085300 Manihot esculenta HOM05D002827 ORTHO05D003148 1.8e-22 109.4 94 62.8
vmacro06459 Vaccinium macrocarpon HOM05D002827 ORTHO05D003148 2.4e-22 109.0 103 56.3
FAN13G0389 Fragaria x ananassa HOM05D002827 ORTHO05D003148 1.5e-21 106.3 102 54.9
FAN13G0807 Fragaria x ananassa HOM05D002827 ORTHO05D003148 1.5e-21 106.3 102 54.9
Dinv37035 Davidia involucrata HOM05D002827 ORTHO05D003148 2.6e-21 105.5 98 60.2
MBI13_g31554_MAGBIO Magnolia biondii HOM05D002827 ORTHO05D003148 2.6e-21 105.5 98 60.2
VMungo0647G1213 Vigna mungo HOM05D002827 ORTHO05D003148 2.6e-21 105.5 99 58.6
MSTRG.22147 Avicennia marina HOM05D002827 ORTHO05D003148 7.6e-21 104.0 97 55.7
RcHm_v2.0_Chr7g0194671 Rosa chinensis HOM05D002827 ORTHO05D003148 7.6e-21 104.0 97 55.7
EL10Ac7g18134 Beta vulgaris HOM05D002827 ORTHO05D003148 9.9e-21 103.6 97 61.9
FAN18G1948 Fragaria x ananassa HOM05D002827 ORTHO05D003148 1.3e-20 103.2 91 57.1
Sabra01G0173100 Salix brachista HOM05D002827 ORTHO05D003148 1.3e-20 103.2 91 60.4
Migut.G01111 Erythranthe guttata HOM05D002827 ORTHO05D003148 1.7e-20 102.8 91 57.1
Migut.G01147 Erythranthe guttata HOM05D002827 ORTHO05D003148 1.7e-20 102.8 91 57.1
Oeu020149.1 Olea europaea HOM05D002827 ORTHO05D003148 2.2e-20 102.4 100 56.0
Nitab4.5_0000807g0120 Nicotiana tabacum HOM05D002827 ORTHO05D003148 2.9e-20 102.1 110 56.4
arahy.Tifrunner.gnm1.ann1.4E6LTA Arachis hypogaea HOM05D002827 ORTHO05D003148 3.8e-20 101.7 97 53.6
arahy.Tifrunner.gnm1.ann1.FXBY81 Arachis hypogaea HOM05D002827 ORTHO05D003148 3.8e-20 101.7 97 53.6
Phvul.001G032500 Phaseolus vulgaris HOM05D002827 ORTHO05D003148 3.8e-20 101.7 98 54.1
Migut.D01666 Erythranthe guttata HOM05D002827 ORTHO05D003148 6.4e-20 100.9 91 56.0
RcHm_v2.0_Chr1g0363621 Rosa chinensis HOM05D002827 ORTHO05D003148 6.4e-20 100.9 97 54.6
Aqoxy6G00529 Aquilegia oxysepala HOM05D002827 ORTHO05D003148 8.4e-20 100.5 97 58.8
Ca_14281_v3 Cicer arietinum L. HOM05D002827 ORTHO05D003148 8.4e-20 100.5 96 54.2
SalBow5G4265 Salvia bowleyana HOM05D002827 ORTHO05D003148 1.1e-19 100.1 115 48.7
HPP92_015359 Vanilla planifolia HOM05D002827 ORTHO05D003148 1.1e-19 100.1 105 53.3
Ah.15g094290 Amaranthus hybridus HOM05D002827 ORTHO05D003148 1.9e-19 99.4 107 51.4
Medtr7g029385 Medicago truncatula HOM05D002827 ORTHO05D003148 1.9e-19 99.4 96 54.2
Potri.004G228200 Populus trichocarpa HOM05D002827 ORTHO05D003148 1.9e-19 99.4 91 60.4
PGR102G2960 Punica granatum HOM05D002827 ORTHO05D003148 2.4e-19 99.0 92 59.8
SGA_v2.0_scaffold28G11930 Striga asiatica HOM05D002827 ORTHO05D003148 3.2e-19 98.6 89 55.1
Cc04_g08770 Coffea canephora HOM05D002827 ORTHO05D003148 4.1e-19 98.2 111 48.6
Eucgr.F04033 Eucalyptus grandis HOM05D002827 ORTHO05D003148 4.1e-19 98.2 93 57.0
Lj1C522G9 Lonicera japonica HOM05D002827 ORTHO05D003148 4.1e-19 98.2 93 59.1
Glyma.17G232000 Glycine max HOM05D002827 ORTHO05D003148 7.1e-19 97.4 99 55.6
Lj5g0007063 Lotus japonicus HOM05D002827 ORTHO05D003148 9.2e-19 97.1 94 55.3
Nitab4.5_0000170g0190 Nicotiana tabacum HOM05D002827 ORTHO05D003148 1.6e-18 96.3 110 54.5
Peaxi162Scf00474g00212 Petunia axillaris HOM05D002827 ORTHO05D003148 1.6e-18 96.3 112 54.5
PGSC0003DMG400013566 Solanum tuberosum HOM05D002827 ORTHO05D003148 1.6e-18 96.3 112 57.1
Sc15g0001140 Simmondsia chinensis HOM05D002827 ORTHO05D003148 2.1e-18 95.9 97 51.5
TPR.G22316 Trifolium pratense HOM05D002827 ORTHO05D003148 3.5e-18 95.1 112 48.2
RcHm_v2.0_Chr6g0299231 Rosa chinensis HOM05D002827 ORTHO05D003148 1.0e-17 93.6 107 50.5
Solyc07g042750.4 Solanum lycopersicum HOM05D002827 ORTHO05D003148 1.7e-17 92.8 112 57.1
Sopen07g022400 Solanum pennellii HOM05D002827 ORTHO05D003148 1.7e-17 92.8 112 57.1
SGA_v2.0_scaffold36G14391 Striga asiatica HOM05D002827 ORTHO05D003148 2.3e-17 92.4 89 52.8
CAN.G1209.37 Capsicum annuum HOM05D002827 ORTHO05D003148 3.0e-17 92.0 114 55.3
Lalb_Chr03g0040511 Lupinus albus HOM05D002827 ORTHO05D003148 3.0e-17 92.0 98 51.0
FvH4_5g04730 Fragaria vesca HOM05D002827 ORTHO05D003148 3.9e-17 91.7 79 58.2
QL01p051174 Quercus lobata HOM05D002827 ORTHO05D003148 1.2e-15 86.7 83 59.0
FAN04G1822 Fragaria x ananassa HOM05D002827 ORTHO05D003148 1.4e-14 83.2 85 54.1
Psat1g094560 Pisum sativum HOM05D002827 ORTHO05D003148 6.9e-14 80.9 97 45.4
ATR0051G021 Amborella trichopoda HOM05D002827 ORTHO05D003148 7.6e-13 77.4 90 55.6
Os08g0520100 Oryza sativa ssp. japonica HOM05D002827 ORTHO05D003148 1.3e-12 76.6 100 45.0
ECA234G3070 Erigeron canadensis HOM05D002391 ORTHO05D004870 7.1e-11 70.9 59 61.0
Medtr5g459340 Medicago truncatula HOM05D002827 ORTHO05D003148 1.2e-10 70.1 79 48.1
FAN08G2430 Fragaria x ananassa HOM05D002827 ORTHO05D003148 5.1e-09 64.7 59 55.9
unitig_8.g5008 Utricularia gibba HOM05D002827 ORTHO05D003148 1.1e-08 63.5 75 46.7


User provided reference genes

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