Gene: PGSC0003DMG400013566

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400013566
  • Transcript Identifier PGSC0003DMT400035309
  • Gene Type Coding gene
  • Location ST4.03ch07 : 40874619-40878257 : positive

Gene Family Information

  • ID HOM05D002827
  • #Genes/#Species 245/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37434676
  • id PGSC0003DMG400013566.v4.03
  • uniprot M1B239

Descriptions

  • Description Ribosomal pseudouridine synthase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001522
IEA
GOA Databasepseudouridine synthesis
GO:0001522
IEA
InterPropseudouridine synthesis
GO:0009451
IEA
GOA DatabaseRNA modification
GO:0009451
IEA
InterProRNA modification
GO:0000455
IBA
GOA Databaseenzyme-directed rRNA pseudouridine synthesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0009982
IBA
IEA
GOA Databasepseudouridine synthase activity
GO:0009982
IEA
InterPropseudouridine synthase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020103 Pseudouridine synthase, catalytic domain superfamily
IPR006145 Pseudouridine synthase, RsuA/RluA-like
Mapman id Description
16.5.3.4 RNA processing.RNA modification.pseudouridylation.dual-specificity tRNA/rRNA pseudouridine synthase (RluA)