Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG11G013760 Citrullus lanatus HOM05D004390 ORTHO05D004950 5.9e-46 187.2 95 100.0
CsaV3_5G030350 Cucumis sativus L. HOM05D004390 ORTHO05D004950 1.6e-43 179.1 95 96.8
MELO3C011874.2 Cucumis melo HOM05D004390 ORTHO05D004950 7.9e-43 176.8 95 95.8
Sed0024223 Sechium edule HOM05D004390 ORTHO05D004950 4.8e-40 167.5 95 91.6
ClCG09G006830 Citrullus lanatus HOM05D004390 ORTHO05D004950 1.1e-36 156.4 95 85.3
QL12p006243 Quercus lobata HOM05D004390 ORTHO05D004950 5.5e-36 154.1 94 79.8
Eucgr.B03484 Eucalyptus grandis HOM05D004390 ORTHO05D004950 3.6e-35 151.4 95 80.0
QL03p053718 Quercus lobata HOM05D004390 ORTHO05D004950 1.4e-34 149.4 94 78.7
Cfa009329 Carpinus fangiana HOM05D004390 ORTHO05D004950 3.0e-34 148.3 94 76.6
DCAR_007008 Daucus carota HOM05D004390 ORTHO05D004950 3.0e-34 148.3 89 80.9
FvH4_4g23930 Fragaria vesca HOM05D004390 ORTHO05D004950 3.9e-34 147.9 93 80.6
FAN12G2113 Fragaria x ananassa HOM05D006059 ORTHO05D004950 3.9e-34 147.9 93 80.6
ECA233G0624 Erigeron canadensis HOM05D004390 ORTHO05D004950 5.2e-34 147.5 95 78.9
ECA240G0924 Erigeron canadensis HOM05D004390 ORTHO05D004950 5.2e-34 147.5 95 78.9
FAN07G0791 Fragaria x ananassa HOM05D004390 ORTHO05D004950 5.2e-34 147.5 93 79.6
FAN17G1207 Fragaria x ananassa HOM05D004390 ORTHO05D004950 5.2e-34 147.5 93 79.6
FAN22G0688 Fragaria x ananassa HOM05D004390 ORTHO05D004950 5.2e-34 147.5 93 79.6
Prupe.1G228300 Prunus persica HOM05D004390 ORTHO05D004950 8.8e-34 146.7 95 76.8
Haze_10374 Corylus avellana HOM05D004390 ORTHO05D004950 1.1e-33 146.4 95 76.8
Lsat_1_v5_gn_8_149361 Lactuca sativa HOM05D004390 ORTHO05D004950 2.0e-33 145.6 95 78.9
CiPaw.06G101400 Carya illinoinensis HOM05D004390 ORTHO05D004950 3.3e-33 144.8 93 77.4
CANSAT80G1060 Cannabis sativa HOM05D004390 ORTHO05D004950 7.4e-33 143.7 95 75.8
Duzib248G1577 Durio zibethinus HOM05D004390 ORTHO05D004950 7.4e-33 143.7 95 75.8
Glyma.11G249600 Glycine max HOM05D004390 ORTHO05D004950 9.7e-33 143.3 95 73.7
Dinv14827 Davidia involucrata HOM05D001171 ORTHO05D001872 1.3e-32 142.9 95 76.8
Psat5g095200 Pisum sativum HOM05D004390 ORTHO05D004950 1.3e-32 142.9 95 76.8
Lj7E465T0 Lonicera japonica HOM05D004390 ORTHO05D004950 1.7e-32 142.5 95 76.8
TAR371G0820 Trochodendron aralioides HOM05D004390 ORTHO05D004950 1.7e-32 142.5 93 76.3
Glyma.08G103600 Glycine max HOM05D004390 ORTHO05D004950 2.8e-32 141.7 95 74.7
Medtr3g085510 Medicago truncatula HOM05D004390 ORTHO05D004950 2.8e-32 141.7 95 76.8
PGR102G2095 Punica granatum HOM05D004390 ORTHO05D004950 2.8e-32 141.7 97 75.3
Glyma.05G146700 Glycine max HOM05D004390 ORTHO05D004950 6.3e-32 140.6 95 74.7
Hma1.2p1_0065F.1_g035640 Hydrangea macrophylla HOM05D004390 ORTHO05D004950 6.3e-32 140.6 95 77.9
Nn4g22350 Nelumbo nucifera HOM05D004390 ORTHO05D004950 6.3e-32 140.6 94 73.4
Phvul.002G174400 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 6.3e-32 140.6 95 76.8
arahy.Tifrunner.gnm1.ann1.FA6GLZ Arachis hypogaea HOM05D004390 ORTHO05D004950 8.2e-32 140.2 95 74.7
Nitab4.5_0000379g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 8.2e-32 140.2 95 73.7
Potri.008G175775 Populus trichocarpa HOM05D004390 ORTHO05D004950 8.2e-32 140.2 95 72.6
HanXRQChr08g0207731 Helianthus annuus HOM05D004390 ORTHO05D004950 1.1e-31 139.8 95 74.7
Manes.12G012800 Manihot esculenta HOM05D004390 ORTHO05D004950 1.1e-31 139.8 95 76.8
Phvul.001G260900 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 1.1e-31 139.8 95 72.6
Gorai.008G164900 Gossypium raimondii HOM05D004390 ORTHO05D004950 1.4e-31 139.4 94 73.4
Nitab4.5_0000367g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 1.8e-31 139.0 95 72.6
Thecc.02G210700 Theobroma cacao HOM05D004390 ORTHO05D004950 1.8e-31 139.0 95 74.7
TWI18G1082 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 1.8e-31 139.0 95 75.8
TAR622G0138 Trochodendron aralioides HOM05D004390 ORTHO05D004950 1.8e-31 139.0 93 76.3
Aqoxy5G03398 Aquilegia oxysepala HOM05D004390 ORTHO05D004950 2.4e-31 138.7 89 74.2
Ca_16468_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 2.4e-31 138.7 94 73.4
Ca_18042_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 2.4e-31 138.7 95 74.7
Cc11_g00910 Coffea canephora HOM05D004390 ORTHO05D004950 2.4e-31 138.7 95 74.7
Medtr8g080380 Medicago truncatula HOM05D004390 ORTHO05D004950 2.4e-31 138.7 95 71.6
Psat4g014960 Pisum sativum HOM05D004390 ORTHO05D004950 2.4e-31 138.7 95 74.7
Atru.chr11.2308 Acer truncatum HOM05D004390 ORTHO05D004950 3.1e-31 138.3 95 74.7
arahy.Tifrunner.gnm1.ann1.L53BL2 Arachis hypogaea HOM05D004390 ORTHO05D004950 3.1e-31 138.3 93 75.3
Duzib251G0716 Durio zibethinus HOM05D004390 ORTHO05D004950 3.1e-31 138.3 95 74.7
Gohir.D01G154700 Gossypium hirsutum HOM05D004390 ORTHO05D004950 3.1e-31 138.3 95 73.7
Gorai.002G191500 Gossypium raimondii HOM05D004390 ORTHO05D004950 3.1e-31 138.3 95 73.7
Lj4g0026719 Lotus japonicus HOM05D004390 ORTHO05D004950 3.1e-31 138.3 95 74.7
Nn3g16498 Nelumbo nucifera HOM05D004390 ORTHO05D004950 4.1e-31 137.9 94 73.4
Sc11g0000500 Simmondsia chinensis HOM05D004390 ORTHO05D004950 4.1e-31 137.9 94 72.3
Gohir.D12G152500 Gossypium hirsutum HOM05D004390 ORTHO05D004950 5.3e-31 137.5 95 72.6
GSVIVG01010448001 Vitis vinifera HOM05D004390 ORTHO05D004950 5.3e-31 137.5 94 72.3
CSS0004094 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 9.1e-31 136.7 95 74.7
CSS0048605 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 9.1e-31 136.7 95 74.7
Cpa.g.sc34.218 Carica papaya HOM05D004390 ORTHO05D004950 9.1e-31 136.7 95 71.6
Glyma.18G007600 Glycine max HOM05D004390 ORTHO05D004950 9.1e-31 136.7 95 72.6
Gohir.A01G155400 Gossypium hirsutum HOM05D004390 ORTHO05D004950 1.6e-30 136.0 95 73.7
Sabra08G0134000 Salix brachista HOM05D004390 ORTHO05D004950 2.0e-30 135.6 95 70.5
Gohir.A12G148600 Gossypium hirsutum HOM05D004390 ORTHO05D004950 2.6e-30 135.2 94 72.3
arahy.Tifrunner.gnm1.ann1.CM82MG Arachis hypogaea HOM05D004390 ORTHO05D004950 3.5e-30 134.8 95 72.6
Peaxi162Scf00128g01124 Petunia axillaris HOM05D004390 ORTHO05D004950 3.5e-30 134.8 94 70.2
THA.LOC109116235 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 3.5e-30 134.8 79 78.5
Cc09_g06290 Coffea canephora HOM05D015856 ORTHO05D004950 4.5e-30 134.4 94 73.4
COL.COLO4_20382 Corchorus olitorius HOM05D001171 ORTHO05D001872 5.9e-30 134.0 95 73.7
THA.LOC104824892 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 5.9e-30 134.0 95 72.6
THA.LOC104824896 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 5.9e-30 134.0 95 72.6
TPR.G28271 Trifolium pratense HOM05D004390 ORTHO05D004950 5.9e-30 134.0 95 72.6
BcaNung00935 Brassica carinata HOM05D004390 ORTHO05D004950 7.7e-30 133.7 95 73.7
THA.LOC104824895 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 7.7e-30 133.7 95 71.6
TWI75G0215 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 7.7e-30 133.7 95 73.7
Lsat_1_v5_gn_3_29821 Lactuca sativa HOM05D004390 ORTHO05D004950 1.3e-29 132.9 95 70.5
Migut.K00715 Erythranthe guttata HOM05D004390 ORTHO05D004950 1.7e-29 132.5 95 71.6
TAR629G1658 Trochodendron aralioides HOM05D004390 ORTHO05D004950 1.7e-29 132.5 93 69.9
Actinidia20702 Actinidia chinensis HOM05D004390 ORTHO05D004950 2.9e-29 131.7 95 71.6
BolC1t00106H Brassica oleracea HOM05D004390 ORTHO05D004950 2.9e-29 131.7 95 72.6
CAN.G638.34 Capsicum annuum HOM05D004390 ORTHO05D004950 2.9e-29 131.7 95 70.5
Migut.E00025 Erythranthe guttata HOM05D004390 ORTHO05D004950 2.9e-29 131.7 94 70.2
Oeu058917.1 Olea europaea HOM05D004390 ORTHO05D004950 2.9e-29 131.7 95 69.5
THA.LOC104824898 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 2.9e-29 131.7 95 70.5
Carub.0007s0202 Capsella rubella HOM05D004390 ORTHO05D004950 3.8e-29 131.3 95 72.6
Sp7g35820 Schrenkiella parvula HOM05D004390 ORTHO05D004950 3.8e-29 131.3 95 72.6
TWI36G1003 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 3.8e-29 131.3 95 72.6
Actinidia09657 Actinidia chinensis HOM05D004390 ORTHO05D004950 5.0e-29 131.0 95 71.6
EL10Ac6g13484 Beta vulgaris HOM05D004390 ORTHO05D004950 5.0e-29 131.0 95 69.5
A01p00960 Brassica napus HOM05D004390 ORTHO05D004950 5.0e-29 131.0 95 72.6
BraA01t00094Z Brassica rapa HOM05D004390 ORTHO05D004950 5.0e-29 131.0 95 72.6
Thhalv10027263m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 8.5e-29 130.2 95 72.6
Potri.010G059300 Populus trichocarpa HOM05D004390 ORTHO05D004950 1.1e-28 129.8 95 70.5
Sopen03g001750 Solanum pennellii HOM05D004390 ORTHO05D004950 1.1e-28 129.8 95 68.4
Actinidia08077 Actinidia chinensis HOM05D001171 ORTHO05D001872 1.5e-28 129.4 95 71.6
Rhsim10G0039200 Rhododendron simsii HOM05D004390 ORTHO05D004950 1.5e-28 129.4 84 73.8
AL7G12360 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 1.9e-28 129.0 95 71.6
AUR62024125 Chenopodium quinoa HOM05D004390 ORTHO05D004950 1.9e-28 129.0 88 68.2
MBI11_g07456_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 1.9e-28 129.0 94 69.1
THA.LOC104824890 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 1.9e-28 129.0 95 68.4
CARHR246620 Cardamine hirsuta HOM05D004390 ORTHO05D004950 4.2e-28 127.9 94 70.2
Aa31LG7G14400 Aethionema arabicum HOM05D004390 ORTHO05D004950 5.5e-28 127.5 95 69.5
Os12g0438900 Oryza sativa ssp. japonica HOM05D004390 ORTHO05D004950 5.5e-28 127.5 94 68.1
Aa31LG7G15420 Aethionema arabicum HOM05D004390 ORTHO05D004950 7.2e-28 127.1 95 68.4
PSO478G0183 Papaver somniferum HOM05D004390 ORTHO05D004950 7.2e-28 127.1 94 69.1
AT4G40042 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 9.4e-28 126.7 79 75.9
Nitab4.5_0002210g0100 Nicotiana tabacum HOM05D004390 ORTHO05D004950 9.4e-28 126.7 95 67.4
Hund25458 Selenicereus undatus HOM05D004390 ORTHO05D004950 9.4e-28 126.7 94 66.0
PSO017G1102 Papaver somniferum HOM05D004390 ORTHO05D004950 1.2e-27 126.3 94 68.1
Duzib268G0993 Durio zibethinus HOM05D004390 ORTHO05D004950 1.6e-27 125.9 95 68.4
AL4G11930 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 2.1e-27 125.6 95 69.5
Aa31LG6G15170 Aethionema arabicum HOM05D004390 ORTHO05D004950 3.6e-27 124.8 95 68.4
AT2G22425 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 3.6e-27 124.8 95 69.5
Thhalv10021836m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 3.6e-27 124.8 90 67.8
Rhsim12G0027700 Rhododendron simsii HOM05D004390 ORTHO05D004950 3.6e-27 124.8 79 73.4
BraA09t41150Z Brassica rapa HOM05D004390 ORTHO05D004950 4.7e-27 124.4 95 67.4
CARHR113610 Cardamine hirsuta HOM05D004390 ORTHO05D004950 4.7e-27 124.4 95 68.4
A09p57580 Brassica napus HOM05D004390 ORTHO05D004950 6.1e-27 124.0 95 67.4
C08p40770 Brassica napus HOM05D004390 ORTHO05D004950 6.1e-27 124.0 95 67.4
SpUn0131_0010 Schrenkiella parvula HOM05D004390 ORTHO05D004950 8.0e-27 123.6 95 69.5
Nitab4.5_0000592g0450 Nicotiana tabacum HOM05D004390 ORTHO05D004950 1.4e-26 122.9 95 66.3
Carub.0004s0159 Capsella rubella HOM05D004390 ORTHO05D004950 3.0e-26 121.7 95 68.4
Ah.02g130970 Amaranthus hybridus HOM05D004390 ORTHO05D004950 4.0e-26 121.3 95 63.2
BcaC07g41074 Brassica carinata HOM05D004390 ORTHO05D004950 5.2e-26 120.9 95 66.3
BolC8t51641H Brassica oleracea HOM05D004390 ORTHO05D004950 5.2e-26 120.9 95 66.3
DCAR_031195 Daucus carota HOM05D001171 ORTHO05D006126 5.2e-26 120.9 95 62.1
CSS0024228 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 8.8e-26 120.2 95 67.4
RcHm_v2.0_Chr4g0430591 Rosa chinensis HOM05D004390 ORTHO05D004950 8.8e-26 120.2 81 72.8
CARHR089330 Cardamine hirsuta HOM05D004390 ORTHO05D004950 1.2e-25 119.8 79 68.4
Thhalv10000378m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 1.5e-25 119.4 95 69.5
Carub.0003s1416 Capsella rubella HOM05D004390 ORTHO05D004950 2.6e-25 118.6 79 67.1
Lalb_Chr07g0187411 Lupinus albus HOM05D004390 ORTHO05D004950 4.4e-25 117.9 83 68.7
Zm00001eb052740 Zea mays HOM05D004390 ORTHO05D004950 7.5e-25 117.1 94 63.8
ATR0561G166 Amborella trichopoda HOM05D004390 ORTHO05D004950 9.7e-25 116.7 93 65.6
Lalb_Chr12g0206281 Lupinus albus HOM05D004390 ORTHO05D004950 9.7e-25 116.7 83 73.5
HPP92_024163 Vanilla planifolia HOM05D000064 ORTHO05D000281 9.7e-25 116.7 95 61.1
HPP92_024177 Vanilla planifolia HOM05D004390 ORTHO05D004950 9.7e-25 116.7 95 61.1
Zm00001eb218300 Zea mays HOM05D004390 ORTHO05D004950 9.7e-25 116.7 94 62.8
BcaB08g35066 Brassica carinata HOM05D004390 ORTHO05D004950 1.7e-24 115.9 95 65.3
MBI13_g26147_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 1.7e-24 115.9 95 62.1
SMO364G0480 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 3.7e-24 114.8 72 73.6
PSO063G2970 Papaver somniferum HOM05D004390 ORTHO05D004950 8.2e-24 113.6 93 60.2
Ah.03g136230 Amaranthus hybridus HOM05D001171 ORTHO05D006126 2.4e-23 112.1 95 61.1
SEGI_16803 Sequoiadendron giganteum HOM05D004390 ORTHO05D004950 2.4e-23 112.1 100 62.0
PSO782G4737 Papaver somniferum HOM05D004390 ORTHO05D004950 5.3e-23 110.9 93 58.1
MBI05_g44034_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 9.1e-23 110.2 94 60.6
CiPaw.05G111600 Carya illinoinensis HOM05D004390 ORTHO05D004950 5.9e-22 107.5 81 65.4
MD13G1117200 Malus domestica HOM05D004390 ORTHO05D004950 1.7e-21 105.9 84 66.7
Solyc03g005740.3 Solanum lycopersicum HOM05D004390 ORTHO05D004950 1.7e-21 105.9 83 65.1
Pp3c4_12150 Physcomitrium patens HOM05D004390 ORTHO05D004950 2.2e-21 105.5 74 63.5
ATR1098G064 Amborella trichopoda HOM05D004390 ORTHO05D004950 1.5e-20 102.8 96 59.4
MBI07_g16243_MAGBIO Magnolia biondii HOM05D002351 ORTHO05D004950 5.5e-20 100.9 83 62.7
TPR.G10940 Trifolium pratense HOM05D004390 ORTHO05D004950 3.6e-19 98.2 65 72.3
Mapoly0041s0086 Marchantia polymorpha HOM05D004390 ORTHO05D004950 1.8e-18 95.9 97 51.5
Pp3c10_14440 Physcomitrium patens HOM05D004390 ORTHO05D004950 1.2e-17 93.2 74 58.1
Sp3g12740 Schrenkiella parvula HOM05D004390 ORTHO05D004950 6.3e-16 87.4 61 63.9
Manes.13G018500 Manihot esculenta HOM05D004390 ORTHO05D004950 4.1e-15 84.7 72 59.7
CBR_g48133 Chara braunii HOM05D004390 ORTHO05D004950 2.0e-14 82.4 94 46.8
Nn4g24822 Nelumbo nucifera HOM05D002155 ORTHO05D004950 3.5e-14 81.6 72 61.1
Nn1g04852 Nelumbo nucifera HOM05D004390 ORTHO05D004950 4.5e-14 81.3 52 75.0
MBI07_g34630_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 2.3e-13 79.0 60 60.0
MCO16G111 Micromonas commoda HOM05D004390 ORTHO05D004950 1.9e-12 75.9 84 45.2
SMO145G0172 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 2.5e-12 75.5 84 42.9
PRCOL_00005433 Prasinoderma coloniale HOM05D004390 ORTHO05D004950 3.2e-12 75.1 74 52.7
Lalb_Chr22g0358881 Lupinus albus HOM05D004390 ORTHO05D004950 1.8e-10 69.3 40 75.0
SMO197G0059 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 2.8e-08 62.0 77 42.9
Pp3c3_460 Physcomitrium patens HOM05D004390 ORTHO05D004950 4.1e-07 58.2 69 34.8
SEGI_01546 Sequoiadendron giganteum HOM05D007557 ORTHO05D009573 7.0e-07 57.4 69 40.6


User provided reference genes

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