Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG11G010960 Citrullus lanatus HOM05D004953 ORTHO05D006193 0.0e+00 1763.0 934 100.0
CsaV3_2G009520 Cucumis sativus L. HOM05D004953 ORTHO05D006193 0.0e+00 1592.8 951 87.3
MELO3C008751.2 Cucumis melo HOM05D004953 ORTHO05D006193 0.0e+00 1588.5 945 87.7
Sed0024263 Sechium edule HOM05D004953 ORTHO05D006193 0.0e+00 1503.8 941 82.4
Sed0015090 Sechium edule HOM05D004953 ORTHO05D006193 0.0e+00 1313.1 941 75.5
RcHm_v2.0_Chr6g0282191 Rosa chinensis HOM05D004953 ORTHO05D006193 0.0e+00 1105.9 941 61.2
MD05G1153500 Malus domestica HOM05D004953 ORTHO05D006193 0.0e+00 1096.3 942 60.8
FAN27G2958 Fragaria x ananassa HOM05D004953 ORTHO05D006193 0.0e+00 1093.6 941 60.9
Duzib133G0915 Durio zibethinus HOM05D004953 ORTHO05D006193 0.0e+00 1092.4 952 59.5
FAN24G2388 Fragaria x ananassa HOM05D004953 ORTHO05D006193 0.0e+00 1091.6 941 61.0
Manes.13G056300 Manihot esculenta HOM05D004953 ORTHO05D006193 0.0e+00 1091.6 952 60.6
FvH4_2g17460 Fragaria vesca HOM05D004953 ORTHO05D006193 0.0e+00 1088.2 941 60.8
Dinv28790 Davidia involucrata HOM05D004953 ORTHO05D006193 0.0e+00 1087.0 946 60.4
Thecc.01G207300 Theobroma cacao HOM05D004953 ORTHO05D006193 0.0e+00 1084.3 953 59.4
Prupe.8G186900 Prunus persica HOM05D004953 ORTHO05D006193 0.0e+00 1080.9 942 60.5
CSS0012001 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 0.0e+00 1078.5 944 60.7
CSS0005222 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 0.0e+00 1077.0 944 60.6
CANSAT01G2219 Cannabis sativa HOM05D004953 ORTHO05D006193 0.0e+00 1075.1 920 59.9
FAN15G1962 Fragaria x ananassa HOM05D004953 ORTHO05D006193 5.8e-311 1070.8 942 60.2
Sabra14G0134100 Salix brachista HOM05D004953 ORTHO05D006193 1.3e-310 1069.7 925 60.4
COL.COLO4_34276 Corchorus olitorius HOM05D004953 ORTHO05D006193 6.3e-310 1067.4 950 58.7
Potri.014G175350 Populus trichocarpa HOM05D004953 ORTHO05D006193 2.7e-308 1062.0 929 60.3
THA.LOC104819011 Tarenaya hassleriana HOM05D004953 ORTHO05D006193 1.7e-307 1059.3 952 57.8
Cfa010574 Carpinus fangiana HOM05D004953 ORTHO05D006193 2.2e-307 1058.9 944 59.5
Ca_08034_v3 Cicer arietinum L. HOM05D004953 ORTHO05D006193 3.8e-307 1058.1 916 59.3
Haze_03508 Corylus avellana HOM05D004953 ORTHO05D006193 3.8e-307 1058.1 946 59.3
Eucgr.K00106 Eucalyptus grandis HOM05D004953 ORTHO05D006193 1.5e-306 1056.2 956 58.8
CiPaw.13G055800 Carya illinoinensis HOM05D004953 ORTHO05D006193 4.2e-306 1054.7 927 60.8
Rhsim13G0055000 Rhododendron simsii HOM05D004953 ORTHO05D006193 1.6e-305 1052.7 948 58.5
Cpa.g.sc8.38 Carica papaya HOM05D004953 ORTHO05D006193 2.1e-305 1052.4 949 58.7
CARHR183800 Cardamine hirsuta HOM05D004953 ORTHO05D006193 1.4e-304 1049.7 949 57.6
Gorai.007G161300 Gossypium raimondii HOM05D004953 ORTHO05D006193 2.3e-304 1048.9 951 57.8
AL8G21200 Arabidopsis lyrata HOM05D004953 ORTHO05D006193 6.8e-304 1047.3 950 58.0
vmacro02841 Vaccinium macrocarpon HOM05D004953 ORTHO05D006193 4.4e-303 1044.6 967 57.1
AT5G48390 Arabidopsis thaliana HOM05D004953 ORTHO05D006193 1.8e-301 1039.3 950 57.8
Lj1g0025378 Lotus japonicus HOM05D004953 ORTHO05D006193 1.8e-301 1039.3 948 58.1
Medtr7g080880 Medicago truncatula HOM05D004953 ORTHO05D006193 2.0e-300 1035.8 943 57.7
VMungo1383G3652 Vigna mungo HOM05D004953 ORTHO05D006193 5.9e-300 1034.2 940 57.3
Cc01_g15850 Coffea canephora HOM05D004953 ORTHO05D006193 2.9e-299 1031.9 945 57.7
Lj2C1111T4 Lonicera japonica HOM05D004953 ORTHO05D006193 3.8e-299 1031.6 947 58.0
Thhalv10005371m.g Eutrema salsugineum HOM05D004953 ORTHO05D006193 8.5e-299 1030.4 953 56.9
Glyma.18G246600 Glycine max HOM05D004953 ORTHO05D006193 2.5e-298 1028.9 942 57.5
Sp2g18750 Schrenkiella parvula HOM05D004953 ORTHO05D006193 2.8e-297 1025.4 953 57.0
QL09p045412 Quercus lobata HOM05D004953 ORTHO05D006193 8.0e-297 1023.8 998 57.1
C07p39140 Brassica napus HOM05D004953 ORTHO05D006193 9.8e-295 1016.9 948 56.2
BolC7t44434H Brassica oleracea HOM05D004953 ORTHO05D006193 9.8e-295 1016.9 948 56.2
A06p39200 Brassica napus HOM05D004953 ORTHO05D006193 1.7e-294 1016.1 948 56.3
Ciclev10018269m.g Citrus clementina HOM05D004953 ORTHO05D006193 2.8e-294 1015.4 947 58.1
Carub.0008s0798 Capsella rubella HOM05D004953 ORTHO05D006193 3.7e-294 1015.0 930 57.8
TWI36G1252 Tripterygium wilfordii HOM05D004953 ORTHO05D006193 3.7e-294 1015.0 959 56.8
Oeu013420.1 Olea europaea HOM05D004953 ORTHO05D006193 3.1e-293 1011.9 947 56.1
TPR.G35843 Trifolium pratense HOM05D004953 ORTHO05D006193 3.5e-292 1008.4 953 56.3
Migut.D00772 Erythranthe guttata HOM05D004953 ORTHO05D006193 1.1e-290 1003.4 941 56.3
Aa31LG11G3580 Aethionema arabicum HOM05D004953 ORTHO05D006193 5.6e-290 1001.1 966 55.2
Atru.BG.40.p Acer truncatum HOM05D004953 ORTHO05D006193 4.4e-287 991.5 938 59.1
CAN.G1468.3 Capsicum annuum HOM05D004953 ORTHO05D006193 5.7e-287 991.1 916 57.0
Solyc09g042760.2 Solanum lycopersicum HOM05D004953 ORTHO05D006193 1.8e-285 986.1 917 56.5
SHI10219 Sapria himalayana HOM05D004953 ORTHO05D006193 7.0e-285 984.2 962 54.7
PGSC0003DMG400021911 Solanum tuberosum HOM05D004953 ORTHO05D006193 3.5e-284 981.9 915 56.5
Nitab4.5_0008926g0010 Nicotiana tabacum HOM05D004953 ORTHO05D006193 4.6e-284 981.5 918 56.4
Nn1g09452 Nelumbo nucifera HOM05D004953 ORTHO05D006193 1.3e-283 979.9 912 55.2
Peaxi162Scf02239g00020 Petunia axillaris HOM05D004953 ORTHO05D006193 1.1e-282 976.9 911 54.9
Sopen09g015810 Solanum pennellii HOM05D004953 ORTHO05D006193 4.3e-282 974.9 917 56.4
SalBow3G1227 Salvia bowleyana HOM05D004953 ORTHO05D006193 1.6e-281 973.0 913 56.2
arahy.Tifrunner.gnm1.ann1.57Z9Z9 Arachis hypogaea HOM05D004953 ORTHO05D006193 3.6e-281 971.8 1000 52.3
Nitab4.5_0000038g0380 Nicotiana tabacum HOM05D004953 ORTHO05D006193 1.8e-280 969.5 917 56.1
EL10Ac5g10584 Beta vulgaris HOM05D004953 ORTHO05D006193 3.4e-279 965.3 953 53.4
HanXRQChr12g0363951 Helianthus annuus HOM05D004953 ORTHO05D006193 2.2e-278 962.6 955 52.9
AUR62028642 Chenopodium quinoa HOM05D004953 ORTHO05D006193 1.4e-277 959.9 948 53.7
Hund02809 Selenicereus undatus HOM05D004953 ORTHO05D006193 9.2e-277 957.2 946 53.9
Psat3g100880 Pisum sativum HOM05D004953 ORTHO05D006193 6.0e-276 954.5 945 53.9
Gohir.A11G144000 Gossypium hirsutum HOM05D004953 ORTHO05D006193 3.0e-275 952.2 822 59.9
Lsat_1_v5_gn_8_98501 Lactuca sativa HOM05D004953 ORTHO05D006193 1.1e-274 950.3 946 52.5
AUR62008065 Chenopodium quinoa HOM05D004953 ORTHO05D006193 5.2e-272 941.4 944 53.1
SGA_v2.0_scaffold8G04488 Striga asiatica HOM05D004953 ORTHO05D006193 9.9e-271 937.2 941 53.5
Sc17g0001570 Simmondsia chinensis HOM05D004953 ORTHO05D006193 1.3e-270 936.8 953 52.5
GSVIVG01001528001 Vitis vinifera HOM05D004953 ORTHO05D006193 1.3e-270 936.8 861 58.9
Aa31LG11G8930 Aethionema arabicum HOM05D004953 ORTHO05D006193 3.5e-268 928.7 926 54.2
ECA236G0268 Erigeron canadensis HOM05D004953 ORTHO05D006193 1.7e-267 926.4 949 51.2
Aqoxy2G04177 Aquilegia oxysepala HOM05D004953 ORTHO05D006193 1.7e-262 909.8 901 53.1
PSO478G1281 Papaver somniferum HOM05D004953 ORTHO05D006193 3.0e-259 899.0 915 51.7
PSO017G6601 Papaver somniferum HOM05D004953 ORTHO05D006193 1.5e-258 896.7 917 51.4
MBI10_g23576_MAGBIO Magnolia biondii HOM05D004953 ORTHO05D006193 8.1e-257 891.0 922 52.4
TAR365G0304 Trochodendron aralioides HOM05D004953 ORTHO05D006193 1.3e-254 883.6 758 60.0
Phvul.008G050500 Phaseolus vulgaris HOM05D004953 ORTHO05D006193 2.2e-246 856.3 813 56.0
BcaC06g30800 Brassica carinata HOM05D004953 ORTHO05D006193 3.5e-236 822.4 821 53.2
unitig_52.g16794 Utricularia gibba HOM05D004953 ORTHO05D006193 2.5e-234 816.2 922 47.6
Gohir.D11G150400 Gossypium hirsutum HOM05D004953 ORTHO05D006193 4.9e-230 802.0 743 57.5
Actinidia04690 Actinidia chinensis HOM05D004953 ORTHO05D006193 1.7e-217 760.4 699 57.1
HPP92_001916 Vanilla planifolia HOM05D004953 ORTHO05D006193 6.3e-217 758.4 917 45.6
DCAR_004775 Daucus carota HOM05D004953 ORTHO05D006193 2.6e-215 753.1 685 58.2
CDE07G1537 Ceratophyllum demersum HOM05D004953 ORTHO05D006193 2.8e-185 653.3 918 40.6
Ah.11g050790 Amaranthus hybridus HOM05D004953 ORTHO05D006193 3.7e-185 652.9 657 52.7
ATR0743G003 Amborella trichopoda HOM05D004953 ORTHO05D006193 2.1e-172 610.5 944 41.1
Os01g0890900 Oryza sativa ssp. japonica HOM05D004953 ORTHO05D006193 1.2e-164 584.7 864 39.7
Lalb_Chr03g0040541 Lupinus albus HOM05D004953 ORTHO05D006193 6.4e-161 572.4 487 59.8
SEGI_29467 Sequoiadendron giganteum HOM05D004953 ORTHO05D006193 1.1e-155 555.1 912 36.7
Lalb_Chr03g0040531 Lupinus albus HOM05D004953 ORTHO05D006193 1.7e-129 468.0 467 56.3
SMO201G0221 Selaginella moellendorffii HOM05D004953 ORTHO05D006193 1.3e-124 451.8 869 32.8
Zm00001eb145140 Zea mays HOM05D004953 ORTHO05D006193 2.5e-120 437.6 717 39.3
Mapoly0032s0035 Marchantia polymorpha HOM05D004953 ORTHO05D006193 1.6e-119 434.9 872 31.5
Glyma.09G246350 Glycine max HOM05D004953 ORTHO05D006193 7.9e-119 432.6 421 53.0
CANSAT01G2868 Cannabis sativa HOM05D004953 ORTHO05D006193 1.8e-118 431.4 422 56.9
Actinidia33396 Actinidia chinensis HOM05D004953 ORTHO05D006193 1.0e-113 415.6 422 52.6
Pp3c2_410 Physcomitrium patens HOM05D004953 ORTHO05D006193 1.3e-113 415.2 888 32.2
Actinidia33395 Actinidia chinensis HOM05D004953 ORTHO05D006193 2.7e-111 407.5 397 53.9
Actinidia23342 Actinidia chinensis HOM05D004953 ORTHO05D006193 3.0e-78 297.7 417 43.6
FAN15G1853 Fragaria x ananassa HOM05D004953 ORTHO05D006193 5.7e-69 266.9 183 67.8
Actinidia12854 Actinidia chinensis HOM05D004953 ORTHO05D006193 5.9e-66 256.9 259 53.3
FvH4_2g09600 Fragaria vesca HOM05D004953 ORTHO05D006193 1.9e-43 182.2 326 37.7
FAN24G3373 Fragaria x ananassa HOM05D004953 ORTHO05D006193 9.2e-43 179.9 348 36.8
FvH4_4g15200 Fragaria vesca HOM05D004953 ORTHO05D006193 1.7e-33 149.1 134 56.0
Actinidia23343 Actinidia chinensis HOM05D004953 ORTHO05D006193 6.2e-31 140.6 150 48.7
FAN14G2335 Fragaria x ananassa HOM05D004953 ORTHO05D006193 2.4e-27 128.6 289 34.9
FAN11G3683 Fragaria x ananassa HOM05D004953 ORTHO05D006193 3.2e-27 128.3 344 30.2
TPR.G1778 Trifolium pratense HOM05D004953 ORTHO05D019267 5.4e-27 127.5 467 27.8
FvH4_3g38850 Fragaria vesca HOM05D004953 ORTHO05D006193 9.0e-22 110.2 117 57.3
FvH4_7g13151 Fragaria vesca HOM05D004953 ORTHO05D006193 6.4e-20 104.0 68 72.1
FvH4_6g36680 Fragaria vesca HOM05D004953 ORTHO05D006193 8.4e-20 103.6 98 51.0
FAN14G2572 Fragaria x ananassa HOM05D004953 ORTHO05D006193 2.4e-19 102.1 72 63.9
FvH4_6g27414 Fragaria vesca HOM05D004953 ORTHO05D006193 4.2e-19 101.3 72 63.9
FvH4_4g10312 Fragaria vesca HOM05D004953 ORTHO05D006193 1.6e-18 99.4 72 62.5
FvH4_6g36881 Fragaria vesca HOM05D004953 ORTHO05D006193 2.1e-18 99.0 72 62.5
Actinidia29995 Actinidia chinensis HOM05D004953 ORTHO05D006193 7.8e-18 97.1 229 32.8
FvH4_2g12761 Fragaria vesca HOM05D004953 ORTHO05D006193 1.0e-17 96.7 72 59.7
TAR365G0721 Trochodendron aralioides HOM05D004953 ORTHO05D006193 2.3e-17 95.5 123 43.9
Actinidia12853 Actinidia chinensis HOM05D001772 ORTHO05D000476 8.7e-17 93.6 140 44.3
CSS0023073 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 6.9e-14 84.0 61 62.3
CSS0012475 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 1.2e-13 83.2 61 62.3
FvH4_4g15182 Fragaria vesca HOM05D004953 ORTHO05D006193 5.8e-13 80.9 46 76.1
SMO203G0202 Selaginella moellendorffii HOM05D003498 ORTHO05D006193 3.2e-11 75.1 59 57.6
FvH4_7g08382 Fragaria vesca HOM05D004953 ORTHO05D006193 5.4e-11 74.3 55 58.2
CSS0040358 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 9.3e-11 73.6 57 63.2
FAN14G1126 Fragaria x ananassa HOM05D004953 ORTHO05D006193 7.9e-10 70.5 55 56.4
FAN09G3899 Fragaria x ananassa HOM05D004953 ORTHO05D006193 1.3e-09 69.7 55 56.4
SMO203G0177 Selaginella moellendorffii HOM05D004953 ORTHO05D006193 1.3e-09 69.7 310 23.9
CSS0036997 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 3.9e-09 68.2 57 59.6
FAN24G1763 Fragaria x ananassa HOM05D004953 ORTHO05D006193 3.7e-07 61.6 38 73.7
Peaxi162Scf00132g00233 Petunia axillaris HOM05D001229 ORTHO05D005418 4.8e-07 61.2 93 39.8
FAN14G1607 Fragaria x ananassa HOM05D004953 ORTHO05D006193 8.1e-07 60.5 59 61.0
TPR.G3742 Trifolium pratense HOM05D004953 ORTHO05D006193 8.1e-07 60.5 38 73.7


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