Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 1.5e-241 839.3 488 100.0
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 1.1e-167 594.0 495 74.3
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 2.4e-159 566.2 495 76.2
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 8.2e-144 514.6 519 67.8
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 2.1e-115 420.2 357 68.9
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 2.4e-111 406.8 336 65.2
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 5.4e-111 405.6 337 65.3
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 3.5e-110 402.9 342 65.8
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 7.8e-110 401.7 322 68.0
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 5.0e-109 399.1 331 64.7
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 1.9e-108 397.1 339 64.3
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 1.9e-108 397.1 339 63.4
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 9.5e-108 394.8 337 65.0
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 2.1e-107 393.7 340 63.2
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 6.2e-107 392.1 338 63.0
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 1.8e-106 390.6 338 62.7
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 2.3e-106 390.2 359 66.0
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 3.1e-106 389.8 337 61.7
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 5.8e-105 385.6 332 65.1
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 2.4e-103 380.2 335 63.3
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 4.1e-103 379.4 333 63.1
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 2.1e-102 377.1 345 60.6
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 7.8e-102 375.2 330 62.1
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 8.6e-101 371.7 343 62.4
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 2.5e-100 370.2 344 60.5
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 4.7e-99 365.9 337 59.6
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 8.1e-99 365.2 339 59.0
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 1.1e-98 364.8 327 59.3
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 8.9e-98 361.7 342 59.9
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 3.4e-97 359.8 344 58.7
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 4.4e-97 359.4 338 59.2
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 7.6e-97 358.6 341 59.5
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 2.9e-96 356.7 326 60.1
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 2.9e-96 356.7 359 62.7
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 2.9e-96 356.7 374 56.7
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 3.8e-96 356.3 341 60.4
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 4.9e-96 355.9 316 61.4
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 8.4e-96 355.1 340 57.9
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 1.1e-95 354.8 344 57.3
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 1.4e-95 354.4 328 58.2
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 1.9e-95 354.0 337 59.1
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 3.2e-95 353.2 324 60.2
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 3.2e-95 353.2 324 60.2
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 4.1e-95 352.8 338 59.5
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 4.1e-95 352.8 324 60.2
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 4.1e-95 352.8 331 59.8
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 5.4e-95 352.4 324 59.9
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 5.4e-95 352.4 337 55.5
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 9.2e-95 351.7 280 67.9
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 9.2e-95 351.7 338 58.0
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 1.2e-94 351.3 280 67.1
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 2.1e-94 350.5 328 59.1
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 2.7e-94 350.1 337 58.5
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 6.0e-94 349.0 337 58.2
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 1.7e-93 347.4 336 56.5
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 5.1e-93 345.9 326 59.8
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 1.5e-92 344.4 280 66.4
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 1.9e-92 344.0 344 59.0
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 2.5e-92 343.6 339 59.3
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 7.3e-92 342.0 328 57.3
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 1.2e-91 341.3 335 57.0
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 3.6e-91 339.7 291 66.0
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 3.6e-91 339.7 281 66.2
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 6.2e-91 339.0 344 57.0
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 2.0e-89 334.0 277 67.5
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 5.4e-87 325.9 261 69.7
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 2.1e-86 323.9 326 57.4
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 2.7e-86 323.6 275 64.0
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 3.5e-86 323.2 265 65.3
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 4.6e-86 322.8 310 54.5
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 1.0e-85 321.6 263 68.8
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 5.1e-85 319.3 262 65.3
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 6.4e-80 302.4 280 60.0
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 2.7e-78 297.0 274 62.0
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 3.0e-77 293.5 327 52.0
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 3.6e-75 286.6 282 55.0
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 4.0e-74 283.1 270 58.9
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 8.4e-72 275.4 206 71.4
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 1.6e-67 261.2 264 56.1
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 7.6e-65 252.3 197 69.0
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 5.5e-63 246.1 161 78.3
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 3.3e-60 236.9 186 67.7
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 2.1e-59 234.2 333 44.4
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 1.2e-57 228.4 206 62.1
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 7.6e-57 225.7 184 66.8
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 4.2e-55 219.9 281 47.7
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 7.2e-55 219.2 281 47.7
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 7.4e-44 182.6 174 57.5
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 8.2e-43 179.1 234 48.3
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 1.8e-42 177.9 183 53.0
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 1.2e-38 165.2 271 35.4
CSS0049134 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 4.5e-25 120.2 93 74.2
CSS0017739 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.7e-24 118.2 121 52.9
SMO275G0007 Selaginella moellendorffii HOM05D007647 ORTHO05D009644 2.2e-24 117.9 197 37.6


User provided reference genes

Program Settings