Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG09G004310 Citrullus lanatus HOM05D006280 ORTHO05D007876 0.0e+00 1203.7 740 100.0
MELO3C023535.2 Cucumis melo HOM05D006280 ORTHO05D007876 9.9e-266 920.2 713 73.8
Sed0005202 Sechium edule HOM05D006280 ORTHO05D007876 9.1e-219 764.2 713 70.5
CsaV3_7G031230 Cucumis sativus L. HOM05D006280 ORTHO05D007876 6.3e-212 741.5 592 81.8
Sed0013445 Sechium edule HOM05D006280 ORTHO05D007876 2.9e-201 706.1 712 61.8
QL04p005292 Quercus lobata HOM05D006280 ORTHO05D007876 6.6e-137 492.3 708 50.0
Haze_03235 Corylus avellana HOM05D006280 ORTHO05D007876 2.3e-129 467.2 713 43.6
CSS0048133 Camellia sinensis var. sinensis HOM05D006280 ORTHO05D007876 9.6e-128 461.8 731 42.8
Thecc.01G413600 Theobroma cacao HOM05D006280 ORTHO05D007876 2.9e-124 450.3 715 42.1
CiPaw.13G003200 Carya illinoinensis HOM05D006280 ORTHO05D007876 4.6e-122 443.0 706 44.5
Gohir.A11G160200 Gossypium hirsutum HOM05D006280 ORTHO05D007876 5.3e-118 429.5 716 40.8
Gohir.D11G166400 Gossypium hirsutum HOM05D006280 ORTHO05D007876 1.2e-117 428.3 716 40.5
Gorai.007G177400 Gossypium raimondii HOM05D006280 ORTHO05D007876 1.2e-117 428.3 716 40.5
Potri.001G269700 Populus trichocarpa HOM05D006280 ORTHO05D007876 1.2e-117 428.3 716 45.0
Actinidia20679 Actinidia chinensis HOM05D006280 ORTHO05D007876 1.3e-116 424.9 753 41.6
Peaxi162Scf00428g00816 Petunia axillaris HOM05D006280 ORTHO05D007876 2.2e-116 424.1 748 39.8
TWI09G0861 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 2.2e-116 424.1 700 40.4
CAN.G170.124 Capsicum annuum HOM05D006280 ORTHO05D007876 1.9e-115 421.0 748 38.1
Prupe.2G009900 Prunus persica HOM05D006280 ORTHO05D007876 2.5e-115 420.6 699 50.8
Lj9A629T105 Lonicera japonica HOM05D006280 ORTHO05D007876 4.2e-115 419.9 720 41.0
Nitab4.5_0003361g0010 Nicotiana tabacum HOM05D006280 ORTHO05D007876 4.2e-115 419.9 747 38.8
TWI73G0538 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 9.3e-115 418.7 694 45.2
Duzib268G1473 Durio zibethinus HOM05D006280 ORTHO05D007876 2.7e-114 417.2 715 40.3
PGSC0003DMG400006815 Solanum tuberosum HOM05D006280 ORTHO05D007876 2.8e-111 407.1 773 37.3
MD02G1315100 Malus domestica HOM05D006280 ORTHO05D007876 1.1e-110 405.2 747 39.6
Nitab4.5_0001542g0030 Nicotiana tabacum HOM05D006280 ORTHO05D007876 5.9e-109 399.4 748 38.4
Sopen01g033930 Solanum pennellii HOM05D006280 ORTHO05D007876 1.1e-107 395.2 746 37.5
Hma1.2p1_0280F.1_g112910 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 1.9e-107 394.4 733 43.5
Ciclev10030953m.g Citrus clementina HOM05D006280 ORTHO05D007876 9.4e-107 392.1 683 42.9
Eucgr.J01260 Eucalyptus grandis HOM05D006280 ORTHO05D007876 1.5e-104 384.8 708 38.0
Cpa.g.sc234.10 Carica papaya HOM05D006280 ORTHO05D007876 4.3e-104 383.3 702 42.6
GSVIVG01032060001 Vitis vinifera HOM05D006280 ORTHO05D007876 4.8e-103 379.8 703 41.3
SGA_v2.0_scaffold167G38459 Striga asiatica HOM05D006280 ORTHO05D007876 1.5e-101 374.8 751 37.2
CANSAT01G2414 Cannabis sativa HOM05D006280 ORTHO05D007876 1.3e-100 371.7 704 38.8
MSTRG.20601 Avicennia marina HOM05D006280 ORTHO05D007876 4.7e-98 363.2 763 37.1
Migut.B01331 Erythranthe guttata HOM05D006280 ORTHO05D007876 4.7e-98 363.2 771 36.6
Hund03633 Selenicereus undatus HOM05D006280 ORTHO05D007876 1.0e-97 362.1 701 37.1
Sc14g0005130 Simmondsia chinensis HOM05D006280 ORTHO05D007876 2.6e-96 357.5 713 36.2
Aa31LG10G7200 Aethionema arabicum HOM05D006280 ORTHO05D007876 1.3e-95 355.1 698 37.5
SalBow7G2237 Salvia bowleyana HOM05D006280 ORTHO05D007876 1.3e-95 355.1 761 39.4
Oeu039119.3 Olea europaea HOM05D006280 ORTHO05D007876 1.7e-95 354.8 762 47.5
Cc02_g27560 Coffea canephora HOM05D006280 ORTHO05D007876 4.8e-95 353.2 756 36.4
THA.LOC104802360 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 1.1e-94 352.1 700 36.9
THA.LOC104817627 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 2.4e-94 350.9 699 37.9
FAN03G0134 Fragaria x ananassa HOM05D006280 ORTHO05D007876 2.0e-93 347.8 794 34.4
Lsat_1_v5_gn_4_46080 Lactuca sativa HOM05D006280 ORTHO05D007876 2.9e-92 344.0 707 36.5
HanXRQChr16g0519571 Helianthus annuus HOM05D006280 ORTHO05D007876 9.4e-91 339.0 702 43.0
Potri.009G064200 Populus trichocarpa HOM05D006280 ORTHO05D007876 1.2e-90 338.6 649 43.1
QL04p005267 Quercus lobata HOM05D006280 ORTHO05D007876 8.0e-90 335.9 625 46.2
PGR044G1516 Punica granatum HOM05D006280 ORTHO05D007876 1.0e-89 335.5 705 36.3
Sabra09G0047500 Salix brachista HOM05D006280 ORTHO05D007876 5.2e-89 333.2 697 37.7
Solyc01g086930.4 Solanum lycopersicum HOM05D006280 ORTHO05D007876 6.7e-89 332.8 699 35.1
SGA_v2.0_scaffold119G32715 Striga asiatica HOM05D006280 ORTHO05D007876 7.4e-88 329.3 755 40.9
Manes.10G146200 Manihot esculenta HOM05D006280 ORTHO05D007876 8.2e-87 325.9 737 38.7
RcHm_v2.0_Chr1g0314941 Rosa chinensis HOM05D006280 ORTHO05D007876 1.4e-86 325.1 695 42.2
EL10Ac6g13519 Beta vulgaris HOM05D006280 ORTHO05D007876 1.6e-85 321.6 743 33.9
AUR62028915 Chenopodium quinoa HOM05D006280 ORTHO05D007876 1.5e-83 315.1 718 34.1
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 1.6e-82 311.6 688 36.6
FvH4_7g00721 Fragaria vesca HOM05D006280 ORTHO05D007876 5.2e-81 306.6 731 37.6
Dinv09375 Davidia involucrata HOM05D006280 ORTHO05D007876 1.7e-79 301.6 373 49.1
FAN10G1835 Fragaria x ananassa HOM05D006280 ORTHO05D007876 4.1e-78 297.0 728 37.2
Carub.0005s1845 Capsella rubella HOM05D006280 ORTHO05D007876 9.1e-78 295.8 731 35.3
Nn2g15492 Nelumbo nucifera HOM05D006280 ORTHO05D007876 9.1e-78 295.8 760 36.6
AL5G32680 Arabidopsis lyrata HOM05D006280 ORTHO05D007876 1.2e-77 295.4 715 35.0
PSO447G0216 Papaver somniferum HOM05D006280 ORTHO05D007876 4.5e-77 293.5 712 34.0
CARHR161840 Cardamine hirsuta HOM05D006280 ORTHO05D007876 1.3e-76 292.0 713 42.4
Thhalv10010216m.g Eutrema salsugineum HOM05D006280 ORTHO05D007876 2.5e-75 287.7 702 37.2
MBI01_g40597_MAGBIO Magnolia biondii HOM05D006280 ORTHO05D007876 1.2e-74 285.4 712 34.6
Aqoxy2G00116 Aquilegia oxysepala HOM05D006280 ORTHO05D007876 1.6e-74 285.0 702 33.5
Lalb_Chr03g0033951 Lupinus albus HOM05D006280 ORTHO05D007876 6.1e-74 283.1 697 34.6
ECA234G4003 Erigeron canadensis HOM05D006280 ORTHO05D007876 8.0e-74 282.7 713 40.4
AT3G52115 Arabidopsis thaliana HOM05D006280 ORTHO05D007876 4.0e-73 280.4 726 34.2
MD07G1006900 Malus domestica HOM05D006280 ORTHO05D007876 5.2e-73 280.0 573 38.7
Sp5g10170 Schrenkiella parvula HOM05D006280 ORTHO05D007876 1.5e-72 278.5 710 36.8
FAN01G3121 Fragaria x ananassa HOM05D006280 ORTHO05D007876 7.5e-72 276.2 764 38.2
AUR62005634 Chenopodium quinoa HOM05D006280 ORTHO05D007876 1.6e-69 268.5 673 32.4
Hma1.2p1_0845F.1_g227480 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 2.7e-69 267.7 601 39.9
FAN06G1370 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.3e-68 265.4 675 36.7
C04p40810 Brassica napus HOM05D006280 ORTHO05D007876 1.7e-68 265.0 716 38.7
BolC4t25665H Brassica oleracea HOM05D006280 ORTHO05D007876 1.7e-68 265.0 716 38.7
A04p07250 Brassica napus HOM05D006280 ORTHO05D007876 6.6e-68 263.1 713 38.0
BraA04t16420Z Brassica rapa HOM05D006280 ORTHO05D007876 6.6e-68 263.1 713 38.0
BcaB02g08586 Brassica carinata HOM05D006280 ORTHO05D007876 1.5e-67 261.9 714 32.8
BcaC02g09279 Brassica carinata HOM05D006280 ORTHO05D007876 1.5e-67 261.9 713 38.6
Psat4g148560 Pisum sativum HOM05D006280 ORTHO05D007876 6.1e-66 256.5 727 30.8
PSO210G6454 Papaver somniferum HOM05D006280 ORTHO05D007876 1.5e-64 251.9 376 42.0
FAN01G1556 Fragaria x ananassa HOM05D006280 ORTHO05D007876 2.0e-64 251.5 470 42.6
Ca_23874_v3 Cicer arietinum L. HOM05D006280 ORTHO05D007876 7.5e-64 249.6 695 31.1
Dinv14267 Davidia involucrata HOM05D006280 ORTHO05D007876 2.8e-63 247.7 455 39.6
Rhsim01G0130600 Rhododendron simsii HOM05D006280 ORTHO05D007876 1.1e-62 245.7 469 38.8
TPR.G21742 Trifolium pratense HOM05D006280 ORTHO05D007876 7.0e-62 243.0 701 31.1
Glyma.12G238500 Glycine max HOM05D006280 ORTHO05D007876 4.5e-61 240.4 417 40.5
TAR636G0096 Trochodendron aralioides HOM05D006280 ORTHO05D007876 5.0e-60 236.9 252 52.8
arahy.Tifrunner.gnm1.ann1.JHR7K6 Arachis hypogaea HOM05D006280 ORTHO05D007876 4.0e-57 227.3 747 29.9
Lj3g0014839 Lotus japonicus HOM05D006280 ORTHO05D007876 4.0e-57 227.3 761 29.4
Os06g0613400 Oryza sativa ssp. japonica HOM05D006280 ORTHO05D007876 1.1e-54 219.2 730 31.0
Rhsim01G0130700 Rhododendron simsii HOM05D006280 ORTHO05D007876 4.1e-54 217.2 252 50.4
Zm00001eb388310 Zea mays HOM05D006280 ORTHO05D007876 5.4e-54 216.9 721 29.4
arahy.Tifrunner.gnm1.ann1.0Y513H Arachis hypogaea HOM05D006280 ORTHO05D007876 3.3e-51 207.6 367 38.1
VMungo1127G1733 Vigna mungo HOM05D006280 ORTHO05D007876 1.2e-50 205.7 708 28.5
Dinv09374 Davidia involucrata HOM05D006280 ORTHO05D007876 5.2e-49 200.3 349 41.8
Glyma.13G204200 Glycine max HOM05D006280 ORTHO05D007876 2.0e-48 198.4 213 53.5
Medtr8g036940 Medicago truncatula HOM05D006280 ORTHO05D007876 8.3e-47 193.0 700 28.7
Phvul.011G212200 Phaseolus vulgaris HOM05D006280 ORTHO05D007876 1.3e-44 185.7 368 39.4
ATR0824G264 Amborella trichopoda HOM05D006280 ORTHO05D007876 3.0e-44 184.5 764 28.9
CDE04G2764 Ceratophyllum demersum HOM05D006280 ORTHO05D007876 8.6e-44 183.0 251 43.8
vmacro21179 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 2.1e-42 178.3 148 62.2
Dinv14268 Davidia involucrata HOM05D006280 ORTHO05D007876 2.0e-40 171.8 130 66.2
Hma1.2p1_0312F.1_g121350 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 2.9e-39 167.9 206 47.6
vmacro21180 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 7.8e-37 159.8 464 33.0
unitig_8.g3859 Utricularia gibba HOM05D006280 ORTHO05D007876 5.4e-30 137.1 382 30.1
Manes.07G004300 Manihot esculenta HOM05D006280 ORTHO05D007876 2.7e-29 134.8 304 32.6
TAR636G3118 Trochodendron aralioides HOM05D006280 ORTHO05D007876 3.6e-26 124.4 374 31.0
SMO196G0201 Selaginella moellendorffii HOM05D006280 ORTHO05D007876 4.8e-26 124.0 190 42.6
SEGI_32119 Sequoiadendron giganteum HOM05D006280 ORTHO05D007876 9.0e-25 119.8 767 23.7
MSTRG.5009 Avicennia marina HOM05D006280 ORTHO05D007876 1.9e-22 112.1 373 29.8
Mapoly0001s0083 Marchantia polymorpha HOM05D006280 ORTHO05D007876 1.6e-21 109.0 89 56.2
AagrBONN_evm.TU.Sc2ySwM_117.1753 Anthoceros agrestis HOM05D006280 ORTHO05D007876 2.1e-21 108.6 82 58.5
DCAR_006240 Daucus carota HOM05D006280 ORTHO05D007876 1.3e-20 105.9 169 40.8
Pp3c16_2140 Physcomitrium patens HOM05D006280 ORTHO05D007876 3.0e-20 104.8 81 63.0
unitig_8.g3860 Utricularia gibba HOM05D006280 ORTHO05D007876 3.0e-20 104.8 166 45.2
QL04p005302 Quercus lobata HOM05D006280 ORTHO05D007876 3.9e-20 104.4 180 39.4
QL04p005379 Quercus lobata HOM05D000011 ORTHO05D007876 4.5e-16 90.9 265 31.3
PSO210G6643 Papaver somniferum HOM05D006280 ORTHO05D007876 5.8e-16 90.5 173 39.9
MCO05G132 Micromonas commoda HOM05D006280 ORTHO05D007876 5.3e-09 67.4 80 40.0
THA.LOC109117177 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 5.8e-08 63.9 154 31.2
HPP92_006144 Vanilla planifolia HOM05D002569 ORTHO05D006728 1.1e-06 59.7 166 30.1


User provided reference genes

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