Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG06G006720 Citrullus lanatus HOM05D007216 ORTHO05D009261 6.2e-144 514.2 280 100.0
CsaV3_2G013060 Cucumis sativus L. HOM05D007216 ORTHO05D009261 6.9e-95 351.3 280 71.4
MELO3C026778.2 Cucumis melo HOM05D007216 ORTHO05D009261 1.3e-93 347.1 273 76.6
Sed0000846 Sechium edule HOM05D007216 ORTHO05D009261 4.1e-71 272.3 266 58.3
Sed0021571 Sechium edule HOM05D007216 ORTHO05D009261 5.3e-71 271.9 258 61.2
Sed0019243 Sechium edule HOM05D007216 ORTHO05D009261 8.0e-67 258.1 266 56.0
Duzib052G0756 Durio zibethinus HOM05D007216 ORTHO05D009261 1.9e-39 167.2 237 45.1
Thecc.04G245800 Theobroma cacao HOM05D007216 ORTHO05D009261 7.8e-38 161.8 242 44.6
Haze_11299 Corylus avellana HOM05D007216 ORTHO05D009261 1.6e-35 154.1 244 42.2
Cfa008380 Carpinus fangiana HOM05D007216 ORTHO05D009261 2.1e-35 153.7 244 41.0
Haze_11297 Corylus avellana HOM05D007216 ORTHO05D009261 2.8e-35 153.3 244 41.8
COL.COLO4_15786 Corchorus olitorius HOM05D007216 ORTHO05D009261 8.1e-35 151.8 247 40.1
Duzib151G0028 Durio zibethinus HOM05D007216 ORTHO05D009261 8.1e-35 151.8 236 42.4
QL06p015626 Quercus lobata HOM05D007216 ORTHO05D009261 1.1e-34 151.4 242 41.3
Duzib151G0820 Durio zibethinus HOM05D007216 ORTHO05D009261 4.0e-34 149.4 236 41.9
Atru.chr4.2233 Acer truncatum HOM05D007216 ORTHO05D009261 5.2e-34 149.1 245 40.4
Prupe.1G030500 Prunus persica HOM05D007216 ORTHO05D009261 4.4e-33 146.0 220 43.2
MD13G1206900 Malus domestica HOM05D007216 ORTHO05D009261 7.5e-33 145.2 214 44.4
Cc03_g04820 Coffea canephora HOM05D007216 ORTHO05D009261 1.3e-32 144.4 239 43.1
CiPaw.01G190600 Carya illinoinensis HOM05D007216 ORTHO05D009261 2.9e-32 143.3 257 40.1
Sopen09g032280 Solanum pennellii HOM05D007216 ORTHO05D009261 2.9e-32 143.3 187 43.3
MD16G1208400 Malus domestica HOM05D007216 ORTHO05D009261 8.3e-32 141.7 218 43.6
CiPaw.02G116600 Carya illinoinensis HOM05D007216 ORTHO05D009261 2.4e-31 140.2 259 40.2
RcHm_v2.0_Chr4g0390311 Rosa chinensis HOM05D007216 ORTHO05D009261 7.1e-31 138.7 243 40.3
Solyc09g083360.3 Solanum lycopersicum HOM05D007216 ORTHO05D009261 7.1e-31 138.7 187 42.2
Gorai.006G246400 Gossypium raimondii HOM05D007216 ORTHO05D009261 1.3e-29 134.4 215 43.7
Actinidia05467 Actinidia chinensis HOM05D007216 ORTHO05D009261 1.7e-29 134.0 242 40.5
Cpa.g.sc58.45 Carica papaya HOM05D007216 ORTHO05D009261 1.7e-29 134.0 207 42.0
Gohir.A09G222900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 1.7e-29 134.0 217 43.3
Ciclev10005777m.g Citrus clementina HOM05D007216 ORTHO05D009261 6.6e-29 132.1 248 39.9
FvH4_4g02610 Fragaria vesca HOM05D007216 ORTHO05D009261 8.6e-29 131.7 215 42.3
Eucgr.H00196 Eucalyptus grandis HOM05D007216 ORTHO05D009261 3.3e-28 129.8 253 38.3
QL06p015621 Quercus lobata HOM05D007216 ORTHO05D009261 3.3e-28 129.8 215 39.5
Actinidia08446 Actinidia chinensis HOM05D007216 ORTHO05D009261 4.3e-28 129.4 241 40.7
Gohir.D09G224900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 9.5e-28 128.3 181 45.9
Potri.008G161800 Populus trichocarpa HOM05D007216 ORTHO05D009261 6.2e-27 125.6 244 36.5
Rhsim02G0032900 Rhododendron simsii HOM05D007216 ORTHO05D009261 6.2e-27 125.6 189 42.9
Potri.010G077000 Populus trichocarpa HOM05D007216 ORTHO05D009261 1.8e-26 124.0 239 36.8
Migut.G00433 Erythranthe guttata HOM05D007216 ORTHO05D009261 6.8e-26 122.1 198 39.4
AL390U10010 Arabidopsis lyrata HOM05D007216 ORTHO05D009261 1.2e-25 121.3 187 43.3
CANSAT78G2280 Cannabis sativa HOM05D007216 ORTHO05D009261 1.2e-25 121.3 254 42.1
PGR031G3332 Punica granatum HOM05D007216 ORTHO05D009261 1.5e-25 120.9 246 38.2
DCAR_027275 Daucus carota HOM05D007216 ORTHO05D009261 2.6e-25 120.2 255 35.7
ATR0665G548 Amborella trichopoda HOM05D007216 ORTHO05D009261 3.4e-25 119.8 184 41.3
Manes.03G169100 Manihot esculenta HOM05D007216 ORTHO05D009261 3.4e-25 119.8 245 35.9
CSS0019068 Camellia sinensis var. sinensis HOM05D007216 ORTHO05D009261 4.4e-25 119.4 211 37.9
Duzib212G0514 Durio zibethinus HOM05D007216 ORTHO05D009261 4.4e-25 119.4 212 41.0
Sabra10G0031800 Salix brachista HOM05D007216 ORTHO05D009261 5.8e-25 119.0 240 35.4
TAR365G0907 Trochodendron aralioides HOM05D007216 ORTHO05D009261 5.8e-25 119.0 256 36.7
Aa31LG5G3580 Aethionema arabicum HOM05D007216 ORTHO05D009261 7.6e-25 118.6 187 40.1
Peaxi162Scf00813g00118 Petunia axillaris HOM05D007216 ORTHO05D009261 9.9e-25 118.2 166 44.6
MSTRG.4097 Avicennia marina HOM05D007216 ORTHO05D009261 1.3e-24 117.9 222 36.0
GSVIVG01018111001 Vitis vinifera HOM05D007216 ORTHO05D009261 2.2e-24 117.1 182 42.9
THA.LOC104827376 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 3.7e-24 116.3 218 37.2
BcaC06g31685 Brassica carinata HOM05D007216 ORTHO05D009261 4.9e-24 115.9 189 40.2
Eucgr.J01563 Eucalyptus grandis HOM05D007216 ORTHO05D009261 4.9e-24 115.9 188 42.0
BraA09t37658Z Brassica rapa HOM05D007216 ORTHO05D009261 1.4e-23 114.4 193 40.9
Thhalv10003353m.g Eutrema salsugineum HOM05D007216 ORTHO05D009261 1.4e-23 114.4 198 41.9
Nn1g02593 Nelumbo nucifera HOM05D007216 ORTHO05D009261 1.4e-23 114.4 207 39.6
BcaC04g21907 Brassica carinata HOM05D007216 ORTHO05D009261 3.2e-23 113.2 193 40.4
FAN12G1817 Fragaria x ananassa HOM05D007216 ORTHO05D009261 3.2e-23 113.2 198 39.9
Nn3g19525 Nelumbo nucifera HOM05D007216 ORTHO05D009261 3.2e-23 113.2 221 38.5
Sc13g0004990 Simmondsia chinensis HOM05D007216 ORTHO05D009261 3.2e-23 113.2 217 37.3
AT5G43650 Arabidopsis thaliana HOM05D007216 ORTHO05D009261 5.4e-23 112.5 162 45.7
Psat6g102240 Pisum sativum HOM05D007216 ORTHO05D009261 1.6e-22 110.9 261 34.5
Gorai.005G046700 Gossypium raimondii HOM05D007216 ORTHO05D009261 2.1e-22 110.5 230 39.1
THA.LOC104801097 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 2.1e-22 110.5 279 33.0
Gohir.D02G042400 Gossypium hirsutum HOM05D007216 ORTHO05D009261 4.6e-22 109.4 230 39.1
A09p20520 Brassica napus HOM05D007216 ORTHO05D009261 6.0e-22 109.0 200 40.5
CARHR006300 Cardamine hirsuta HOM05D007216 ORTHO05D009261 7.8e-22 108.6 186 38.7
A06p47770 Brassica napus HOM05D007216 ORTHO05D009261 1.7e-21 107.5 186 39.2
Dinv29914 Davidia involucrata HOM05D007216 ORTHO05D009261 1.7e-21 107.5 149 45.6
BcaB07g31004 Brassica carinata HOM05D007216 ORTHO05D009261 2.3e-21 107.1 193 40.4
BolC9t55498H Brassica oleracea HOM05D007216 ORTHO05D009261 3.9e-21 106.3 191 40.3
Glyma.02G000800 Glycine max HOM05D007216 ORTHO05D009261 5.1e-21 105.9 233 33.9
Gohir.A02G035500 Gossypium hirsutum HOM05D007216 ORTHO05D009261 5.1e-21 105.9 230 38.7
C09p25930 Brassica napus HOM05D007216 ORTHO05D009261 8.6e-21 105.1 174 40.8
SpUn0744_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 8.6e-21 105.1 173 37.6
BcaC06g34638 Brassica carinata HOM05D007216 ORTHO05D009261 2.5e-20 103.6 188 38.8
C07p26230 Brassica napus HOM05D007216 ORTHO05D009261 2.5e-20 103.6 188 38.8
BolC7t43151H Brassica oleracea HOM05D007216 ORTHO05D009261 2.5e-20 103.6 188 38.8
Medtr1g040435 Medicago truncatula HOM05D007216 ORTHO05D009261 3.3e-20 103.2 234 33.8
DCAR_027276 Daucus carota HOM05D007216 ORTHO05D009261 4.3e-20 102.8 227 34.4
Oeu008788.2 Olea europaea HOM05D007216 ORTHO05D009261 5.6e-20 102.4 158 41.1
Carub.0008s0499 Capsella rubella HOM05D007216 ORTHO05D009261 7.3e-20 102.1 193 38.3
BraA06t27645Z Brassica rapa HOM05D007216 ORTHO05D009261 2.1e-19 100.5 176 38.6
Sabra08G0123600 Salix brachista HOM05D007216 ORTHO05D009261 2.8e-19 100.1 231 32.5
Lalb_Chr03g0037861 Lupinus albus HOM05D007216 ORTHO05D009261 3.6e-19 99.8 241 33.6
CAN.G1007.15 Capsicum annuum HOM05D007216 ORTHO05D009261 1.1e-18 98.2 125 48.0
TWI73G0753 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 4.0e-18 96.3 216 33.3
Hma1.2p1_0893F.1_g233480 Hydrangea macrophylla HOM05D007216 ORTHO05D009261 3.4e-17 93.2 96 53.1
TAR636G2640 Trochodendron aralioides HOM05D007216 ORTHO05D009261 5.8e-17 92.4 203 35.5
Phvul.007G280700 Phaseolus vulgaris HOM05D007216 ORTHO05D009261 1.7e-16 90.9 141 37.6
TWI09G1088 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 4.9e-16 89.4 218 32.1
TPR.G22479 Trifolium pratense HOM05D007216 ORTHO05D009261 8.4e-16 88.6 196 35.7
Nitab4.5_0004798g0070 Nicotiana tabacum HOM05D007216 ORTHO05D009261 1.1e-15 88.2 187 36.4
Os03g0741100 Oryza sativa ssp. japonica HOM05D007216 ORTHO05D009261 1.1e-15 88.2 155 36.8
Zm00001eb056760 Zea mays HOM05D007216 ORTHO05D009261 1.3e-13 81.3 165 34.5
Lj6C656T7 Lonicera japonica HOM05D007216 ORTHO05D009261 5.1e-13 79.3 95 48.4
SpUn0429_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 1.9e-12 77.4 171 33.3
HPP92_023468 Vanilla planifolia HOM05D007216 ORTHO05D009261 2.1e-11 73.9 168 35.1
HPP92_027840 Vanilla planifolia HOM05D007216 ORTHO05D009261 4.0e-10 69.7 194 28.4
HPP92_023463 Vanilla planifolia HOM05D007216 ORTHO05D009261 7.6e-09 65.5 136 36.0
Aqoxy5G00327 Aquilegia oxysepala HOM05D007216 ORTHO05D009261 2.9e-08 63.5 131 32.8
Nitab4.5_0000525g0160 Nicotiana tabacum HOM05D007216 ORTHO05D009261 4.9e-08 62.8 189 30.7
Dinv44631 Davidia involucrata HOM05D007216 ORTHO05D009261 7.1e-07 58.9 72 44.4


User provided reference genes

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