Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G013040 Citrullus lanatus HOM05D006844 ORTHO05D008504 2.3e-283 978.8 720 100.0
MELO3C014826.2 Cucumis melo HOM05D006844 ORTHO05D008504 5.2e-203 711.8 446 91.0
Sed0025706 Sechium edule HOM05D006844 ORTHO05D008504 6.6e-198 694.9 516 78.5
CsaV3_3G027490 Cucumis sativus L. HOM05D006844 ORTHO05D008504 3.8e-161 572.8 338 97.3
Cfa007302 Carpinus fangiana HOM05D006844 ORTHO05D008504 2.8e-140 503.4 506 61.5
Haze_14791 Corylus avellana HOM05D006844 ORTHO05D008504 2.5e-136 490.3 487 62.4
QL02p073443 Quercus lobata HOM05D006844 ORTHO05D008504 3.2e-136 490.0 496 63.3
MD17G1020100 Malus domestica HOM05D006844 ORTHO05D008504 6.7e-134 482.3 453 65.3
TAR622G0321 Trochodendron aralioides HOM05D006844 ORTHO05D008504 1.9e-133 480.7 498 61.2
Dinv33400 Davidia involucrata HOM05D006844 ORTHO05D008504 4.3e-133 479.6 459 55.6
Prupe.2G095300 Prunus persica HOM05D006844 ORTHO05D008504 2.2e-132 477.2 490 51.2
CiPaw.03G048400 Carya illinoinensis HOM05D006844 ORTHO05D008504 3.7e-132 476.5 524 59.0
MD09G1019500 Malus domestica HOM05D006844 ORTHO05D008504 1.0e-129 468.4 518 58.7
TWI12G0359 Tripterygium wilfordii HOM05D006844 ORTHO05D008504 1.7e-129 467.6 533 57.0
TAR374G0379 Trochodendron aralioides HOM05D006844 ORTHO05D008504 1.6e-127 461.1 455 64.4
Thecc.04G024500 Theobroma cacao HOM05D006844 ORTHO05D008504 1.5e-125 454.5 487 59.3
RcHm_v2.0_Chr1g0336521 Rosa chinensis HOM05D006844 ORTHO05D008504 3.3e-125 453.4 455 63.7
Cc07_g00220 Coffea canephora HOM05D006844 ORTHO05D008504 5.7e-125 452.6 507 59.4
FAN03G0177 Fragaria x ananassa HOM05D006844 ORTHO05D008504 9.7e-125 451.8 423 65.5
Eucgr.J02268 Eucalyptus grandis HOM05D006844 ORTHO05D008504 1.3e-124 451.4 478 60.3
FAN01G2612 Fragaria x ananassa HOM05D006844 ORTHO05D008504 2.2e-124 450.7 423 63.6
FvH4_7g06820 Fragaria vesca HOM05D006844 ORTHO05D008504 3.7e-124 449.9 423 60.0
FAN10G3353 Fragaria x ananassa HOM05D006844 ORTHO05D008504 5.3e-123 446.0 423 65.2
Nn4g22496 Nelumbo nucifera HOM05D006844 ORTHO05D008504 2.0e-122 444.1 544 55.7
PGSC0003DMG400012620 Solanum tuberosum HOM05D006844 ORTHO05D008504 2.2e-121 440.7 396 66.2
PGR083G0468 Punica granatum HOM05D006844 ORTHO05D008504 1.1e-120 438.3 433 64.2
Migut.H00039 Erythranthe guttata HOM05D006844 ORTHO05D008504 1.4e-120 438.0 452 61.1
Ciclev10014357m.g Citrus clementina HOM05D006844 ORTHO05D008504 2.5e-120 437.2 510 57.5
Rhsim10G0012800 Rhododendron simsii HOM05D006844 ORTHO05D008504 3.2e-120 436.8 525 56.2
Potri.017G070800 Populus trichocarpa HOM05D006844 ORTHO05D008504 4.2e-120 436.4 525 57.5
MSTRG.24057 Avicennia marina HOM05D006844 ORTHO05D008504 7.2e-120 435.6 552 54.5
Hma1.2p1_0818F.1_g223470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 1.6e-119 434.5 357 71.4
Sopen02g038250 Solanum pennellii HOM05D006844 ORTHO05D008504 1.6e-119 434.5 460 61.1
Atru.chr6.2466 Acer truncatum HOM05D006844 ORTHO05D008504 2.1e-119 434.1 508 55.7
Gohir.D04G080600 Gossypium hirsutum HOM05D006844 ORTHO05D008504 4.7e-119 433.0 455 60.7
MBI13_g29568_MAGBIO Magnolia biondii HOM05D006844 ORTHO05D008504 6.1e-119 432.6 475 60.0
CANSAT64G2991 Cannabis sativa HOM05D006844 ORTHO05D008504 1.8e-118 431.0 466 61.2
AUR62035998 Chenopodium quinoa HOM05D006844 ORTHO05D008504 3.0e-118 430.3 458 59.0
SalBow1G4663 Salvia bowleyana HOM05D006844 ORTHO05D008504 3.9e-118 429.9 454 60.6
Gorai.012G091600 Gossypium raimondii HOM05D006844 ORTHO05D008504 5.1e-118 429.5 455 60.4
Sabra06G0144800 Salix brachista HOM05D006844 ORTHO05D008504 5.1e-118 429.5 484 59.5
vmacro05902 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 6.7e-118 429.1 529 52.9
Lj1g0000789 Lotus japonicus HOM05D006844 ORTHO05D008504 8.8e-118 428.7 500 53.2
Sabra17G0063000 Salix brachista HOM05D006844 ORTHO05D008504 1.5e-117 427.9 477 59.5
Manes.17G108800 Manihot esculenta HOM05D006844 ORTHO05D008504 2.6e-117 427.2 449 61.5
arahy.Tifrunner.gnm1.ann1.QHJM8I Arachis hypogaea HOM05D006844 ORTHO05D008504 3.3e-117 426.8 363 67.8
Nitab4.5_0001031g0200 Nicotiana tabacum HOM05D006844 ORTHO05D008504 4.4e-117 426.4 539 55.8
CAN.G473.42 Capsicum annuum HOM05D006844 ORTHO05D008504 5.7e-117 426.0 456 50.9
SGA_v2.0_scaffold135G34928 Striga asiatica HOM05D006844 ORTHO05D008504 7.4e-117 425.6 494 48.2
CSS0048025 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 1.3e-116 424.9 459 59.5
Duzib147G1239 Durio zibethinus HOM05D006844 ORTHO05D008504 1.3e-116 424.9 534 55.1
CSS0042583 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 2.8e-116 423.7 492 56.3
PSO017G3485 Papaver somniferum HOM05D006844 ORTHO05D008504 1.4e-115 421.4 457 59.3
Peaxi162Scf00420g00214 Petunia axillaris HOM05D006844 ORTHO05D008504 3.1e-115 420.2 390 65.1
PSO478G2097 Papaver somniferum HOM05D006844 ORTHO05D008504 1.5e-114 417.9 455 59.1
Sp6g29690 Schrenkiella parvula HOM05D006844 ORTHO05D008504 2.0e-114 417.5 434 61.3
CARHR198970 Cardamine hirsuta HOM05D006844 ORTHO05D008504 2.6e-114 417.2 492 56.7
Glyma.16G066300 Glycine max HOM05D006844 ORTHO05D008504 3.5e-114 416.8 513 52.8
COL.COLO4_29236 Corchorus olitorius HOM05D006844 ORTHO05D008504 7.7e-114 415.6 477 58.1
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 2.9e-113 413.7 468 58.3
VMungo1080G0705 Vigna mungo HOM05D006844 ORTHO05D008504 3.8e-113 413.3 482 56.0
DCAR_011279 Daucus carota HOM05D006844 ORTHO05D008504 1.9e-112 411.0 448 60.0
Aa31LG11G15140 Aethionema arabicum HOM05D006844 ORTHO05D008504 2.5e-112 410.6 487 56.9
Phvul.008G145600 Phaseolus vulgaris HOM05D006844 ORTHO05D008504 2.5e-112 410.6 476 55.9
THA.LOC104821106 Tarenaya hassleriana HOM05D006844 ORTHO05D008504 3.2e-112 410.2 443 62.5
Thhalv10015672m.g Eutrema salsugineum HOM05D006844 ORTHO05D008504 5.5e-112 409.5 433 61.2
Actinidia36147 Actinidia chinensis HOM05D006844 ORTHO05D008504 6.1e-111 406.0 437 61.6
Ca_03833_v3 Cicer arietinum L. HOM05D006844 ORTHO05D008504 6.1e-111 406.0 489 55.4
Hund11892 Selenicereus undatus HOM05D006844 ORTHO05D008504 6.1e-111 406.0 362 68.0
vmacro05904 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 8.0e-111 405.6 508 54.3
HanXRQChr07g0199131 Helianthus annuus HOM05D006844 ORTHO05D008504 2.3e-110 404.1 403 63.8
Ah.10g033120 Amaranthus hybridus HOM05D001127 ORTHO05D002230 1.5e-109 401.4 520 52.9
Aqoxy3G01340 Aquilegia oxysepala HOM05D006844 ORTHO05D008504 2.0e-109 401.0 500 55.6
AUR62041622 Chenopodium quinoa HOM05D006844 ORTHO05D008504 2.0e-109 401.0 464 56.9
AT3G46610 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 1.7e-108 397.9 436 54.1
Glyma.19G080500 Glycine max HOM05D006844 ORTHO05D008504 2.2e-108 397.5 373 64.1
Hma1.2p1_1484F.1_g286480 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.8e-108 397.1 554 51.4
Nitab4.5_0000935g0090 Nicotiana tabacum HOM05D006844 ORTHO05D008504 2.8e-108 397.1 462 48.3
Solyc02g093620.2 Solanum lycopersicum HOM05D006844 ORTHO05D008504 1.1e-107 395.2 329 71.7
AL6G25060 Arabidopsis lyrata HOM05D006844 ORTHO05D008504 1.4e-107 394.8 433 53.3
Carub.0005s1288 Capsella rubella HOM05D006844 ORTHO05D008504 1.4e-107 394.8 389 64.8
Lalb_Chr14g0362981 Lupinus albus HOM05D006844 ORTHO05D008504 2.4e-107 394.0 432 57.2
Sc07g0004300 Simmondsia chinensis HOM05D006844 ORTHO05D008504 2.4e-107 394.0 434 59.4
BcaB01g06378 Brassica carinata HOM05D006844 ORTHO05D008504 5.3e-107 392.9 358 69.0
Hma1.2p1_1484F.1_g286470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 1.2e-106 391.7 548 52.0
Hma1.2p1_1484F.1_g286476 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 1.2e-106 391.7 548 52.0
Psat3g169440 Pisum sativum HOM05D006844 ORTHO05D008504 1.5e-104 384.8 475 53.1
Gohir.A05G342700 Gossypium hirsutum HOM05D006844 ORTHO05D008504 1.0e-102 378.6 340 69.4
HPP92_010824 Vanilla planifolia HOM05D006844 ORTHO05D008504 1.4e-102 378.3 366 63.4
TPR.G1077 Trifolium pratense HOM05D006844 ORTHO05D008504 4.0e-102 376.7 357 62.7
Lsat_1_v5_gn_2_93460 Lactuca sativa HOM05D006844 ORTHO05D008504 8.8e-102 375.6 330 68.8
Lj7P604T32 Lonicera japonica HOM05D006844 ORTHO05D008504 8.3e-100 369.0 308 73.1
ATR0824G256 Amborella trichopoda HOM05D006844 ORTHO05D008504 3.1e-99 367.1 452 56.2
BcaB01g05117 Brassica carinata HOM05D006844 ORTHO05D008504 4.1e-99 366.7 375 63.5
C03p07580 Brassica napus HOM05D006844 ORTHO05D008504 4.1e-99 366.7 375 63.5
BraA03t09988Z Brassica rapa HOM05D006844 ORTHO05D008504 1.3e-97 361.7 379 62.8
Os12g0283900 Oryza sativa ssp. japonica HOM05D006844 ORTHO05D008504 5.0e-97 359.8 384 61.5
BolC3t13259H Brassica oleracea HOM05D006844 ORTHO05D008504 2.5e-96 357.5 375 62.7
A03p06560 Brassica napus HOM05D006844 ORTHO05D008504 3.2e-96 357.1 379 62.3
CDE09G1288 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 9.4e-96 355.5 440 55.2
CDE02G4692 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 7.5e-93 345.9 435 54.9
BcaB01g06331 Brassica carinata HOM05D006844 ORTHO05D008504 2.0e-74 284.6 371 45.6
Zm00001eb273000 Zea mays HOM05D006844 ORTHO05D008504 2.6e-69 267.7 198 65.2
Oeu023834.1 Olea europaea HOM05D006844 ORTHO05D008504 3.2e-59 234.2 284 45.4
Hma1.2p1_0818F.1_g223460 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.1e-58 231.5 214 55.6
AagrBONN_evm.TU.Sc2ySwM_117.3382 Anthoceros agrestis HOM05D006844 ORTHO05D008504 1.5e-48 198.7 378 44.4
GSVIVG01003980001 Vitis vinifera HOM05D006844 ORTHO05D008504 5.6e-48 196.8 299 40.5
Pp3c26_10760 Physcomitrium patens HOM05D006844 ORTHO05D008504 1.3e-41 175.6 365 36.7
Mapoly0038s0061 Marchantia polymorpha HOM05D006844 ORTHO05D008504 4.6e-34 150.6 384 39.8
EL10Ac2g03526 Beta vulgaris HOM05D006844 ORTHO05D008504 4.5e-29 134.0 215 57.7
SMO367G0130 Selaginella moellendorffii HOM05D006844 ORTHO05D008504 2.8e-23 114.8 144 37.5
AUR62025550 Chenopodium quinoa HOM05D006844 ORTHO05D008504 6.5e-20 103.6 61 75.4
BcaB01g05118 Brassica carinata HOM05D006844 ORTHO05D008504 8.4e-20 103.2 142 41.5


User provided reference genes

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