Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G006850 Citrullus lanatus HOM05D003727 ORTHO05D004731 4.7e-216 754.2 371 100.0
CsaV3_3G015500 Cucumis sativus L. HOM05D003727 ORTHO05D004731 1.0e-207 726.5 371 96.0
ClCG04G007480 Citrullus lanatus HOM05D003727 ORTHO05D004731 1.5e-206 722.6 371 95.7
CsaV3_4G025780 Cucumis sativus L. HOM05D003727 ORTHO05D004731 1.9e-204 715.7 371 94.6
Sed0005057 Sechium edule HOM05D003727 ORTHO05D004731 1.6e-200 702.6 371 92.5
Sed0027316 Sechium edule HOM05D003727 ORTHO05D004731 3.6e-192 674.9 371 87.6
Duzib151G0200 Durio zibethinus HOM05D003727 ORTHO05D004731 3.4e-190 668.3 371 89.2
Thecc.04G312500 Theobroma cacao HOM05D003727 ORTHO05D004731 6.4e-189 664.1 371 88.4
Gohir.A01G036300 Gossypium hirsutum HOM05D003727 ORTHO05D004731 6.0e-187 657.5 371 86.8
arahy.Tifrunner.gnm1.ann1.EP383Y Arachis hypogaea HOM05D003727 ORTHO05D004731 1.7e-186 656.0 371 86.3
Cpa.g.sc146.27 Carica papaya HOM05D003727 ORTHO05D004731 1.7e-186 656.0 372 87.1
GSVIVG01017684001 Vitis vinifera HOM05D003727 ORTHO05D004731 3.0e-186 655.2 371 86.0
Haze_00772 Corylus avellana HOM05D003727 ORTHO05D004731 5.1e-186 654.4 378 85.7
Gohir.D01G023600 Gossypium hirsutum HOM05D003727 ORTHO05D004731 8.6e-186 653.7 371 86.5
Cfa015726 Carpinus fangiana HOM05D003727 ORTHO05D004731 1.5e-185 652.9 371 86.3
CiPaw.01G129700 Carya illinoinensis HOM05D003727 ORTHO05D004731 1.9e-185 652.5 371 86.0
PSO170G4280 Papaver somniferum HOM05D003727 ORTHO05D004731 3.3e-185 651.7 371 86.0
PSO357G0471 Papaver somniferum HOM05D003727 ORTHO05D004731 5.6e-185 651.0 371 85.7
Gorai.002G032100 Gossypium raimondii HOM05D003727 ORTHO05D004731 1.6e-184 649.4 371 85.7
QL06p014168 Quercus lobata HOM05D003727 ORTHO05D004731 8.1e-184 647.1 372 85.8
FvH4_4g21480 Fragaria vesca HOM05D003727 ORTHO05D004731 1.4e-183 646.4 371 85.2
FAN12G0484 Fragaria x ananassa HOM05D003727 ORTHO05D004731 1.4e-183 646.4 371 85.2
RcHm_v2.0_Chr4g0427421 Rosa chinensis HOM05D003727 ORTHO05D004731 1.8e-183 646.0 371 85.4
VMungo1309G1883 Vigna mungo HOM05D003727 ORTHO05D004731 1.8e-183 646.0 371 85.4
CSS0027704 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 3.1e-183 645.2 373 85.0
CANSAT78G0237 Cannabis sativa HOM05D003727 ORTHO05D004731 5.2e-183 644.4 366 85.5
Phvul.009G219900 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 6.8e-183 644.0 371 85.7
Sabra10G0001600 Salix brachista HOM05D003727 ORTHO05D004731 6.8e-183 644.0 371 86.0
Glyma.09G079000 Glycine max HOM05D003727 ORTHO05D004731 1.2e-182 643.3 371 84.9
Glyma.15G188500 Glycine max HOM05D003727 ORTHO05D004731 1.2e-182 643.3 371 85.7
Ciclev10005215m.g Citrus clementina HOM05D003727 ORTHO05D004731 1.5e-182 642.9 371 84.9
MD13G1140800 Malus domestica HOM05D003727 ORTHO05D004731 2.6e-182 642.1 371 84.9
Rhsim04G0248100 Rhododendron simsii HOM05D003727 ORTHO05D004731 2.6e-182 642.1 373 84.7
Lj6g0008986 Lotus japonicus HOM05D003727 ORTHO05D004731 3.4e-182 641.7 371 83.8
Manes.03G211600 Manihot esculenta HOM05D003727 ORTHO05D004731 4.4e-182 641.3 371 84.6
Potri.010G002000 Populus trichocarpa HOM05D003727 ORTHO05D004731 4.4e-182 641.3 371 85.2
Prupe.1G105800 Prunus persica HOM05D003727 ORTHO05D004731 5.8e-182 641.0 371 84.9
TWI73G0221 Tripterygium wilfordii HOM05D003727 ORTHO05D004731 5.8e-182 641.0 371 84.1
DCAR_023405 Daucus carota HOM05D003727 ORTHO05D004731 7.6e-182 640.6 371 84.1
FAN17G0291 Fragaria x ananassa HOM05D003727 ORTHO05D004731 7.6e-182 640.6 371 84.4
Lalb_Chr23g0276061 Lupinus albus HOM05D003727 ORTHO05D004731 1.3e-181 639.8 371 83.8
THA.LOC104798546 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 2.9e-181 638.6 372 84.4
THA.LOC104802717 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 2.9e-181 638.6 372 84.4
PGR004G0380 Punica granatum HOM05D003727 ORTHO05D004731 3.8e-181 638.3 387 82.2
Gohir.A10G176400 Gossypium hirsutum HOM05D003727 ORTHO05D004731 4.9e-181 637.9 371 85.2
THA.LOC104818862 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.1e-180 636.7 372 83.6
Gorai.011G205200 Gossypium raimondii HOM05D003727 ORTHO05D004731 1.4e-180 636.3 371 84.9
Gohir.D10G183100 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.9e-180 636.0 371 84.9
arahy.Tifrunner.gnm1.ann1.BN91E6 Arachis hypogaea HOM05D003727 ORTHO05D004731 5.4e-180 634.4 410 77.6
Carub.0003s0594 Capsella rubella HOM05D003727 ORTHO05D004731 1.2e-179 633.3 372 83.3
Ca_07250_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 1.6e-179 632.9 365 85.2
Solyc01g057210.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 2.1e-179 632.5 374 81.8
C03p42180 Brassica napus HOM05D003727 ORTHO05D004731 2.7e-179 632.1 372 83.6
Ca_02357_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 2.7e-179 632.1 371 83.6
Hma1.2p1_2234F.1_g317700 Hydrangea macrophylla HOM05D003727 ORTHO05D004731 3.5e-179 631.7 371 83.6
PGSC0003DMG400013068 Solanum tuberosum HOM05D003727 ORTHO05D004731 4.6e-179 631.3 374 81.8
BraA03t12649Z Brassica rapa HOM05D003727 ORTHO05D004731 6.0e-179 630.9 372 83.3
Lalb_Chr11g0073551 Lupinus albus HOM05D003727 ORTHO05D004731 6.0e-179 630.9 371 82.5
Sp3g05430 Schrenkiella parvula HOM05D003727 ORTHO05D004731 7.8e-179 630.6 372 83.1
BolC3t16499H Brassica oleracea HOM05D003727 ORTHO05D004731 1.0e-178 630.2 372 83.3
Thhalv10020969m.g Eutrema salsugineum HOM05D003727 ORTHO05D004731 1.0e-178 630.2 372 82.8
Sopen01g021750 Solanum pennellii HOM05D003727 ORTHO05D004731 1.0e-178 630.2 374 81.6
Migut.N00003 Erythranthe guttata HOM05D003727 ORTHO05D004731 1.7e-178 629.4 371 82.7
Peaxi162Scf00126g01030 Petunia axillaris HOM05D003727 ORTHO05D004731 1.7e-178 629.4 374 82.9
MSTRG.21742 Avicennia marina HOM05D003727 ORTHO05D004731 2.3e-178 629.0 371 82.5
AT3G06483 Arabidopsis thaliana HOM05D003727 ORTHO05D004731 3.0e-178 628.6 372 83.1
Aa31LG5G17020 Aethionema arabicum HOM05D003727 ORTHO05D004731 6.6e-178 627.5 372 82.0
Oeu022704.1 Olea europaea HOM05D003727 ORTHO05D004731 8.7e-178 627.1 373 83.4
CARHR081010 Cardamine hirsuta HOM05D003727 ORTHO05D004731 1.5e-177 626.3 372 82.8
TPR.G39591 Trifolium pratense HOM05D003727 ORTHO05D004731 1.5e-177 626.3 371 82.2
Sc25g0002190 Simmondsia chinensis HOM05D003727 ORTHO05D004731 2.5e-177 625.5 398 78.9
TPR.G15491 Trifolium pratense HOM05D003727 ORTHO05D004731 4.3e-177 624.8 365 83.8
HanXRQChr07g0194351 Helianthus annuus HOM05D003727 ORTHO05D004731 5.6e-177 624.4 372 80.4
Nitab4.5_0001334g0060 Nicotiana tabacum HOM05D003727 ORTHO05D004731 5.6e-177 624.4 385 80.3
THA.LOC104827107 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 5.6e-177 624.4 370 83.8
Psat3g179960 Pisum sativum HOM05D003727 ORTHO05D004731 7.3e-177 624.0 365 84.1
TAR365G0780 Trochodendron aralioides HOM05D003727 ORTHO05D004731 9.6e-177 623.6 371 84.1
COL.COLO4_34520 Corchorus olitorius HOM05D003727 ORTHO05D004731 2.1e-176 622.5 362 85.1
Cc03_g00160 Coffea canephora HOM05D003727 ORTHO05D004731 2.8e-176 622.1 371 82.5
Medtr7g024460 Medicago truncatula HOM05D003727 ORTHO05D004731 3.6e-176 621.7 365 83.3
CAN.G179.19 Capsicum annuum HOM05D003727 ORTHO05D004731 4.8e-176 621.3 374 81.3
MBI18_g09643_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 1.1e-175 620.2 372 82.8
Phvul.009G220000 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 1.8e-175 619.4 360 83.6
Aqoxy5G02791 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 3.1e-175 618.6 368 82.1
Nitab4.5_0004046g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 3.1e-175 618.6 374 81.3
Lsat_1_v5_gn_6_70560 Lactuca sativa HOM05D003727 ORTHO05D004731 6.9e-175 617.5 371 80.3
Aqoxy7G02168 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 9.0e-175 617.1 371 81.4
BcaC05g30021 Brassica carinata HOM05D003727 ORTHO05D004731 1.2e-174 616.7 363 82.4
Hund12253 Selenicereus undatus HOM05D003727 ORTHO05D004731 7.6e-174 614.0 370 80.3
CSS0023101 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 9.9e-174 613.6 375 80.3
BcaC05g29821 Brassica carinata HOM05D003727 ORTHO05D004731 1.7e-173 612.8 363 81.8
A03p34710 Brassica napus HOM05D003727 ORTHO05D004731 1.7e-173 612.8 403 76.7
A05p41540 Brassica napus HOM05D003727 ORTHO05D004731 1.7e-173 612.8 363 81.8
C05p60740 Brassica napus HOM05D003727 ORTHO05D004731 1.7e-173 612.8 363 81.8
BolC5t34734H Brassica oleracea HOM05D003727 ORTHO05D004731 1.7e-173 612.8 363 81.8
BraA05t22875Z Brassica rapa HOM05D003727 ORTHO05D004731 1.7e-173 612.8 363 81.8
Medtr2g045490 Medicago truncatula HOM05D003727 ORTHO05D004731 2.2e-173 612.5 371 80.6
EL10Ac3g06260 Beta vulgaris HOM05D003727 ORTHO05D004731 4.2e-172 608.2 371 81.7
Actinidia18506 Actinidia chinensis HOM05D003727 ORTHO05D004731 2.1e-171 605.9 352 84.4
Atru.chr4.3143 Acer truncatum HOM05D003727 ORTHO05D004731 2.7e-171 605.5 359 83.3
Eucgr.H04122 Eucalyptus grandis HOM05D003727 ORTHO05D004731 3.5e-171 605.1 357 82.6
Nitab4.5_0003998g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 2.3e-170 602.4 372 79.6
HanXRQChr05g0149271 Helianthus annuus HOM05D003727 ORTHO05D004731 3.0e-170 602.1 371 77.9
unitig_699.g19980 Utricularia gibba HOM05D003727 ORTHO05D004731 2.5e-169 599.0 371 78.2
CAN.G484.91 Capsicum annuum HOM05D003727 ORTHO05D004731 5.6e-169 597.8 372 78.8
CiPaw.02G069500 Carya illinoinensis HOM05D003727 ORTHO05D004731 5.6e-169 597.8 351 83.5
Lj6A700T83 Lonicera japonica HOM05D003727 ORTHO05D004731 5.6e-169 597.8 371 79.2
Actinidia00296 Actinidia chinensis HOM05D003727 ORTHO05D004731 1.3e-168 596.7 371 81.9
GSVIVG01031319001 Vitis vinifera HOM05D003727 ORTHO05D004731 1.4e-167 593.2 371 77.9
Peaxi162Scf00668g00119 Petunia axillaris HOM05D003727 ORTHO05D004731 3.1e-167 592.0 372 78.2
PSO210G4254 Papaver somniferum HOM05D003727 ORTHO05D004731 4.0e-167 591.7 369 77.0
ATR0796G219 Amborella trichopoda HOM05D003727 ORTHO05D004731 1.2e-166 590.1 370 78.1
HPP92_001184 Vanilla planifolia HOM05D003727 ORTHO05D004731 1.2e-166 590.1 373 78.8
PSO761G0171 Papaver somniferum HOM05D003727 ORTHO05D004731 2.0e-166 589.3 369 77.0
Nn3g21906 Nelumbo nucifera HOM05D003727 ORTHO05D004731 3.4e-166 588.6 372 80.1
Psat1g017520 Pisum sativum HOM05D003727 ORTHO05D004731 2.2e-165 585.9 352 81.2
Glyma.17G040500 Glycine max HOM05D003727 ORTHO05D004731 6.4e-165 584.3 363 79.9
SGA_v2.0_scaffold157G37383 Striga asiatica HOM05D003727 ORTHO05D004731 6.4e-165 584.3 434 69.6
vmacro08010 Vaccinium macrocarpon HOM05D003727 ORTHO05D004731 1.6e-163 579.7 369 78.9
MBI19_g32733_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 3.5e-163 578.6 372 76.9
ECA233G2414 Erigeron canadensis HOM05D003727 ORTHO05D004731 4.6e-163 578.2 371 76.3
SalBow8G0722 Salvia bowleyana HOM05D003727 ORTHO05D004731 7.9e-163 577.4 365 77.8
CDE02G0044 Ceratophyllum demersum HOM05D003727 ORTHO05D002799 6.7e-162 574.3 359 78.8
Lj3A840G128 Lonicera japonica HOM05D003727 ORTHO05D004731 5.6e-161 571.2 369 77.5
Solyc12g098930.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 8.1e-160 567.4 372 74.7
VMungo1215G3329 Vigna mungo HOM05D003727 ORTHO05D004731 1.4e-159 566.6 361 78.7
Sopen12g033680 Solanum pennellii HOM05D003727 ORTHO05D004731 1.8e-159 566.2 372 74.7
AUR62002558 Chenopodium quinoa HOM05D003727 ORTHO05D004731 9.0e-159 563.9 352 80.4
Zm00001eb328730 Zea mays HOM05D003727 ORTHO05D004731 9.0e-159 563.9 364 74.5
Os07g0637300 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 1.2e-158 563.5 365 75.6
Zm00001eb018000 Zea mays HOM05D003727 ORTHO05D004731 2.0e-158 562.8 365 74.0
Nitab4.5_0000895g0180 Nicotiana tabacum HOM05D003727 ORTHO05D004731 3.4e-158 562.0 354 78.0
arahy.Tifrunner.gnm1.ann1.E3SS24 Arachis hypogaea HOM05D003727 ORTHO05D004731 4.5e-158 561.6 368 75.0
PGSC0003DMG400004685 Solanum tuberosum HOM05D003727 ORTHO05D004731 1.2e-155 553.5 372 73.4
Os03g0370000 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 6.7e-154 547.7 363 73.3
SMO115G0066 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 3.3e-153 545.4 371 70.1
SGA_v2.0_scaffold157G37388 Striga asiatica HOM05D003727 ORTHO05D004731 4.8e-152 541.6 374 74.1
MELO3C006749.2 Cucumis melo HOM05D003727 ORTHO05D004731 7.6e-150 534.3 281 93.6
AagrBONN_evm.TU.Sc2ySwM_362.1196 Anthoceros agrestis HOM05D003727 ORTHO05D004731 7.2e-148 527.7 371 67.4
MELO3C003205.2 Cucumis melo HOM05D003727 ORTHO05D004731 2.1e-147 526.2 281 92.9
Mapoly0183s0013 Marchantia polymorpha HOM05D003727 ORTHO05D004731 1.8e-146 523.1 372 68.0
SHI00051 Sapria himalayana HOM05D003727 ORTHO05D004731 3.0e-146 522.3 398 69.3
Pp3c9_2880 Physcomitrium patens HOM05D003727 ORTHO05D004731 5.1e-146 521.5 373 66.8
CDE01G0062 Ceratophyllum demersum HOM05D003727 ORTHO05D004731 2.5e-145 519.2 362 68.8
Pp3c15_8270 Physcomitrium patens HOM05D003727 ORTHO05D004731 5.7e-145 518.1 373 67.0
SEGI_06820 Sequoiadendron giganteum HOM05D003727 ORTHO05D004731 5.3e-143 511.5 360 68.9
Lj4g0016505 Lotus japonicus HOM05D003727 ORTHO05D004731 3.8e-141 505.4 373 69.4
CBR_g238 Chara braunii HOM05D003727 ORTHO05D004731 1.2e-139 500.4 371 65.2
Cre05.g241750 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 9.1e-135 484.2 371 63.9
ECA246G0694 Erigeron canadensis HOM05D003727 ORTHO05D004731 3.2e-132 475.7 326 73.6
Oeu037626.1 Olea europaea HOM05D003727 ORTHO05D004731 9.4e-132 474.2 289 79.6
AL3G17510 Arabidopsis lyrata HOM05D003727 ORTHO05D004731 2.7e-131 472.6 278 83.5
Nn4g25394 Nelumbo nucifera HOM05D003727 ORTHO05D004731 1.0e-130 470.7 284 80.3
unitig_8.g2888 Utricularia gibba HOM05D003727 ORTHO05D004731 3.0e-130 469.2 359 65.7
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 3.9e-130 468.8 365 68.8
Dinv29512 Davidia involucrata HOM05D003727 ORTHO05D004731 5.7e-129 464.9 280 82.5
SGA_v2.0_scaffold64G22028 Striga asiatica HOM05D003727 ORTHO05D004731 5.3e-127 458.4 279 81.7
MCO15G342 Micromonas commoda HOM05D003727 ORTHO05D004731 3.2e-124 449.1 386 57.5
unitig_747.g21103 Utricularia gibba HOM05D003727 ORTHO05D004731 9.4e-124 447.6 329 68.7
SMO367G0119 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 3.1e-119 432.6 367 56.1
PRCOL_00006564 Prasinoderma coloniale HOM05D003727 ORTHO05D004731 3.2e-116 422.5 402 54.5
Glyma.13G119800 Glycine max HOM05D003727 ORTHO05D004731 7.2e-116 421.4 276 76.4
Zm00001eb394190 Zea mays HOM05D003727 ORTHO05D004731 2.7e-115 419.5 273 73.3
Dinv18024 Davidia involucrata HOM05D003727 ORTHO05D004731 2.3e-114 416.4 241 85.1
arahy.Tifrunner.gnm1.ann1.L2TMJG Arachis hypogaea HOM05D003727 ORTHO05D004731 1.7e-112 410.2 286 71.0
Cre06.g278451 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 1.7e-112 410.2 370 55.1
Cc00_g15630 Coffea canephora HOM05D003727 ORTHO05D004731 1.2e-91 340.9 274 65.3
AUR62029978 Chenopodium quinoa HOM05D003727 ORTHO05D004731 7.5e-89 331.6 200 80.5
FAN07G0809 Fragaria x ananassa HOM05D003727 ORTHO05D004731 3.7e-88 329.3 199 82.4
MD16G1136800 Malus domestica HOM05D003727 ORTHO05D004731 1.4e-87 327.4 177 88.1
CSS0050306 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 4.3e-84 315.8 198 77.8
BcaC08g45280 Brassica carinata HOM05D003727 ORTHO05D004731 5.4e-71 272.3 172 79.7
vmacro06806 Vaccinium macrocarpon HOM05D003727 ORTHO05D426773 9.9e-57 224.9 264 51.5
PRCOL_00002805 Prasinoderma coloniale HOM05D003727 ORTHO05D034196 1.1e-50 204.9 377 33.4
Cre06.g252300 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D034196 3.2e-47 193.4 444 29.1
Glyma.14G127500 Glycine max HOM05D003727 ORTHO05D004731 7.9e-46 188.7 113 84.1
Cfa023761 Carpinus fangiana HOM05D003727 ORTHO05D034196 1.5e-41 174.5 400 26.5
Zm00001eb392210 Zea mays HOM05D003727 ORTHO05D444991 2.6e-41 173.7 119 68.1
Zm00001eb394790 Zea mays HOM05D003727 ORTHO05D441672 1.3e-40 171.4 147 60.5
Zm00001eb400710 Zea mays HOM05D003727 ORTHO05D445430 6.5e-40 169.1 119 66.4
Cfa027032 Carpinus fangiana HOM05D003727 ORTHO05D122316 2.4e-34 150.6 303 30.4
Lsat_1_v5_gn_5_23680 Lactuca sativa HOM05D003727 ORTHO05D231959 1.2e-33 148.3 115 62.6
DCAR_023404 Daucus carota HOM05D002877 ORTHO05D003248 1.2e-30 138.3 84 78.6
VMungo0251G3273 Vigna mungo HOM05D003727 ORTHO05D000132 2.4e-10 70.9 49 75.5
vmacro06805 Vaccinium macrocarpon HOM05D003727 ORTHO05D426993 1.3e-08 65.1 68 51.5


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