Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G005070 Citrullus lanatus HOM05D006687 ORTHO05D008379 9.1e-237 823.2 408 100.0
CsaV3_3G013130 Cucumis sativus L. HOM05D006687 ORTHO05D008379 2.0e-236 822.0 408 99.8
MELO3C006520.2 Cucumis melo HOM05D006687 ORTHO05D008379 1.0e-235 819.7 408 99.5
Sed0004090 Sechium edule HOM05D006687 ORTHO05D008379 7.0e-213 743.8 408 90.2
Sed0025649 Sechium edule HOM05D006687 ORTHO05D008379 4.0e-208 728.0 403 90.8
CANSAT78G1673 Cannabis sativa HOM05D006687 ORTHO05D008379 4.9e-198 694.5 416 82.5
RcHm_v2.0_Chr4g0415641 Rosa chinensis HOM05D006687 ORTHO05D008379 5.9e-196 687.6 415 82.4
FAN07G2338 Fragaria x ananassa HOM05D006687 ORTHO05D008379 5.0e-195 684.5 414 82.6
FAN22G0081 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.6e-193 679.5 414 82.1
FvH4_4g16100 Fragaria vesca HOM05D006687 ORTHO05D008379 8.9e-192 673.7 415 81.7
Aqoxy2G03421 Aquilegia oxysepala HOM05D006687 ORTHO05D008379 2.0e-191 672.5 415 81.9
Prupe.1G016800 Prunus persica HOM05D006687 ORTHO05D008379 2.0e-191 672.5 417 80.8
FAN17G0837 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.3e-190 669.8 411 81.8
Nn1g02367 Nelumbo nucifera HOM05D006687 ORTHO05D008379 8.3e-190 667.2 415 80.7
MD16G1196600 Malus domestica HOM05D006687 ORTHO05D008379 1.9e-189 666.0 418 78.9
FAN12G1590 Fragaria x ananassa HOM05D006687 ORTHO05D008379 4.6e-188 661.4 438 77.4
PSO210G5270 Papaver somniferum HOM05D006687 ORTHO05D008379 5.0e-187 657.9 411 79.3
PSO761G0513 Papaver somniferum HOM05D006687 ORTHO05D008379 6.6e-187 657.5 411 79.1
MD13G1196100 Malus domestica HOM05D006687 ORTHO05D008379 1.9e-186 656.0 421 78.1
TAR636G0889 Trochodendron aralioides HOM05D006687 ORTHO05D008379 1.9e-186 656.0 416 79.3
Manes.15G030400 Manihot esculenta HOM05D006687 ORTHO05D008379 1.6e-185 652.9 416 78.6
CDE05G2168 Ceratophyllum demersum HOM05D006687 ORTHO05D008379 4.9e-182 641.3 422 77.3
COL.COLO4_21511 Corchorus olitorius HOM05D006687 ORTHO05D008379 1.1e-181 640.2 419 77.8
Cpa.g.sc58.86 Carica papaya HOM05D006687 ORTHO05D008379 2.4e-181 639.0 423 74.9
CSS0001912 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 1.6e-180 636.3 413 76.5
Thecc.04G234600 Theobroma cacao HOM05D006687 ORTHO05D008379 2.1e-180 636.0 419 78.5
TWI53G1185 Tripterygium wilfordii HOM05D006687 ORTHO05D008379 2.1e-180 636.0 420 76.9
CSS0011956 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 2.7e-180 635.6 413 76.5
Gohir.D02G039900 Gossypium hirsutum HOM05D006687 ORTHO05D008379 6.0e-180 634.4 419 77.6
Duzib052G0918 Durio zibethinus HOM05D006687 ORTHO05D008379 1.3e-179 633.3 419 77.6
Gorai.005G044200 Gossypium raimondii HOM05D006687 ORTHO05D008379 1.7e-179 632.9 419 77.3
Dinv44552 Davidia involucrata HOM05D006687 ORTHO05D008379 2.3e-179 632.5 414 76.3
CiPaw.01G168400 Carya illinoinensis HOM05D006687 ORTHO05D008379 1.5e-178 629.8 417 77.7
Gohir.A02G033400 Gossypium hirsutum HOM05D006687 ORTHO05D008379 1.5e-178 629.8 419 76.4
Haze_00870 Corylus avellana HOM05D006687 ORTHO05D008379 5.6e-178 627.9 425 76.9
Atru.chr4.2438 Acer truncatum HOM05D006687 ORTHO05D008379 3.6e-177 625.2 418 75.1
LjContig00222g0006058 Lotus japonicus HOM05D006687 ORTHO05D008379 8.9e-176 620.5 408 75.7
Actinidia23525 Actinidia chinensis HOM05D006687 ORTHO05D008379 1.1e-173 613.6 410 74.9
THA.LOC104808559 Tarenaya hassleriana HOM05D006687 ORTHO05D008379 2.4e-173 612.5 415 72.8
Potri.010G085500 Populus trichocarpa HOM05D006687 ORTHO05D008379 6.0e-172 607.8 410 73.7
arahy.Tifrunner.gnm1.ann1.SVC7LK Arachis hypogaea HOM05D006687 ORTHO05D008379 7.8e-172 607.4 420 74.0
arahy.Tifrunner.gnm1.ann1.S3TICT Arachis hypogaea HOM05D006687 ORTHO05D008379 1.7e-171 606.3 419 73.7
Sabra08G0118100 Salix brachista HOM05D006687 ORTHO05D008379 1.7e-171 606.3 410 73.2
Lalb_Chr05g0211161 Lupinus albus HOM05D006687 ORTHO05D008379 3.0e-171 605.5 408 74.8
Glyma.11G008100 Glycine max HOM05D006687 ORTHO05D008379 1.5e-170 603.2 409 74.8
PGR004G1051 Punica granatum HOM05D006687 ORTHO05D008379 1.6e-169 599.7 413 74.6
Aa31LG8G9120 Aethionema arabicum HOM05D006687 ORTHO05D008379 4.7e-169 598.2 415 71.6
Phvul.002G042300 Phaseolus vulgaris HOM05D006687 ORTHO05D008379 1.1e-168 597.0 409 73.6
VMungo1215G0895 Vigna mungo HOM05D006687 ORTHO05D008379 1.4e-168 596.7 412 74.8
Carub.0003s2274 Capsella rubella HOM05D006687 ORTHO05D008379 3.1e-168 595.5 415 70.4
QL06p001782 Quercus lobata HOM05D006687 ORTHO05D008379 6.8e-168 594.3 418 74.2
Sc13g0004520 Simmondsia chinensis HOM05D006687 ORTHO05D008379 1.5e-167 593.2 422 71.3
Sp3g20360 Schrenkiella parvula HOM05D006687 ORTHO05D008379 2.6e-167 592.4 415 70.6
CARHR098480 Cardamine hirsuta HOM05D006687 ORTHO05D008379 3.4e-167 592.0 416 70.4
Thhalv10020820m.g Eutrema salsugineum HOM05D006687 ORTHO05D008379 4.4e-167 591.7 415 70.6
AL3G36890 Arabidopsis lyrata HOM05D006687 ORTHO05D008379 2.2e-166 589.3 415 69.9
AT3G22590 Arabidopsis thaliana HOM05D006687 ORTHO05D008379 2.9e-166 589.0 416 70.0
Psat2g189880 Pisum sativum HOM05D006687 ORTHO05D008379 9.2e-165 583.9 408 72.3
BcaB06g26371 Brassica carinata HOM05D006687 ORTHO05D008379 1.0e-163 580.5 414 70.3
BraA05t21491Z Brassica rapa HOM05D006687 ORTHO05D008379 1.3e-163 580.1 416 70.2
A05p26080 Brassica napus HOM05D006687 ORTHO05D008379 2.3e-163 579.3 416 70.0
Ca_24424_v3 Cicer arietinum L. HOM05D006687 ORTHO05D008379 2.3e-163 579.3 408 72.5
BcaC05g28033 Brassica carinata HOM05D006687 ORTHO05D008379 3.9e-163 578.6 413 70.5
C05p40480 Brassica napus HOM05D006687 ORTHO05D008379 3.9e-163 578.6 413 70.5
BolC5t32790H Brassica oleracea HOM05D006687 ORTHO05D008379 3.9e-163 578.6 413 70.5
Ciclev10005124m.g Citrus clementina HOM05D006687 ORTHO05D008379 2.5e-162 575.9 416 70.7
TPR.G37926 Trifolium pratense HOM05D006687 ORTHO05D008379 3.3e-162 575.5 408 73.3
Medtr5g006960 Medicago truncatula HOM05D006687 ORTHO05D008379 3.6e-161 572.0 410 72.7
Nitab4.5_0000321g0170 Nicotiana tabacum HOM05D006687 ORTHO05D008379 1.3e-158 563.5 412 69.4
CAN.G231.10 Capsicum annuum HOM05D006687 ORTHO05D008379 2.2e-158 562.8 408 69.4
Lj3A732T77 Lonicera japonica HOM05D006687 ORTHO05D008379 5.4e-157 558.1 419 68.3
Hund10579 Selenicereus undatus HOM05D006687 ORTHO05D008379 5.1e-155 551.6 420 67.4
Lsat_1_v5_gn_6_103081 Lactuca sativa HOM05D006687 ORTHO05D008379 7.3e-154 547.7 414 70.0
PGSC0003DMG400016264 Solanum tuberosum HOM05D006687 ORTHO05D008379 5.8e-151 538.1 410 67.1
Solyc06g054080.3 Solanum lycopersicum HOM05D006687 ORTHO05D008379 7.6e-151 537.7 410 66.8
Sopen06g019240 Solanum pennellii HOM05D006687 ORTHO05D008379 7.6e-151 537.7 410 66.8
Hma1.2p1_1572F.1_g291370 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 1.3e-150 537.0 407 68.6
Ah.13g071710 Amaranthus hybridus HOM05D006687 ORTHO05D008379 7.1e-149 531.2 415 66.3
AUR62034718 Chenopodium quinoa HOM05D006687 ORTHO05D008379 9.3e-149 530.8 421 66.3
AUR62033670 Chenopodium quinoa HOM05D006687 ORTHO05D008379 2.3e-147 526.2 422 65.6
EL10Ac3g06489 Beta vulgaris HOM05D006687 ORTHO05D008379 3.0e-147 525.8 418 66.3
ECA246G3355 Erigeron canadensis HOM05D006687 ORTHO05D008379 1.1e-146 523.9 414 66.2
Actinidia40137 Actinidia chinensis HOM05D006687 ORTHO05D008379 9.6e-146 520.8 410 68.0
GSVIVG01018007001 Vitis vinifera HOM05D006687 ORTHO05D008379 6.2e-145 518.1 408 68.4
DCAR_024171 Daucus carota HOM05D006687 ORTHO05D008379 2.4e-144 516.2 379 69.1
SGA_v2.0_scaffold191G40505 Striga asiatica HOM05D006687 ORTHO05D008379 2.4e-144 516.2 410 66.8
HanXRQChr11g0327791 Helianthus annuus HOM05D006687 ORTHO05D008379 2.6e-143 512.7 395 68.1
Oeu042805.1 Olea europaea HOM05D006687 ORTHO05D008379 4.5e-143 511.9 411 66.2
SalBow2G2000 Salvia bowleyana HOM05D006687 ORTHO05D008379 9.9e-143 510.8 409 67.5
Migut.G00354 Erythranthe guttata HOM05D006687 ORTHO05D008379 1.1e-141 507.3 412 66.3
ATR0665G006 Amborella trichopoda HOM05D006687 ORTHO05D008379 1.8e-139 500.0 482 57.9
Peaxi162Scf00131g00127 Petunia axillaris HOM05D006687 ORTHO05D008379 4.5e-135 485.3 397 64.5
Sc13g0006070 Simmondsia chinensis HOM05D006687 ORTHO05D008379 2.2e-134 483.0 363 68.0
unitig_749.g14072 Utricularia gibba HOM05D006687 ORTHO05D008379 3.7e-129 465.7 407 61.9
Cc03_g04010 Coffea canephora HOM05D006687 ORTHO05D008379 2.7e-124 449.5 408 60.0
Eucgr.H03443 Eucalyptus grandis HOM05D006687 ORTHO05D008379 2.2e-121 439.9 258 84.9
SEGI_38182 Sequoiadendron giganteum HOM05D006687 ORTHO05D008379 1.0e-118 431.0 471 50.7
Potri.008G155000 Populus trichocarpa HOM05D006687 ORTHO05D008379 3.6e-116 422.5 257 82.1
Rhsim04G0200900 Rhododendron simsii HOM05D006687 ORTHO05D008379 4.5e-111 405.6 261 77.8
HPP92_018620 Vanilla planifolia HOM05D006687 ORTHO05D008379 2.6e-106 389.8 241 82.2
Hma1.2p1_1572F.1_g291380 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 7.7e-103 378.3 297 68.4
Mapoly0001s0040 Marchantia polymorpha HOM05D006687 ORTHO05D008379 9.4e-101 371.3 466 45.5
Zm00001eb217880 Zea mays HOM05D006687 ORTHO05D008379 5.7e-98 362.1 415 51.1
Hma1.2p1_2201F.1_g317030 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 2.4e-96 356.7 250 74.0
Os03g0664700 Oryza sativa ssp. japonica HOM05D006687 ORTHO05D008379 3.2e-93 346.3 414 49.3
Pp3c6_19770 Physcomitrium patens HOM05D006687 ORTHO05D008379 3.0e-91 339.7 469 43.5
Dinv14009 Davidia involucrata HOM05D006687 ORTHO05D008379 8.9e-83 311.6 288 59.4
AagrBONN_evm.TU.Sc2ySwM_344.3801 Anthoceros agrestis HOM05D006687 ORTHO05D008379 7.3e-77 292.0 431 41.3
TAR365G0539 Trochodendron aralioides HOM05D006687 ORTHO05D008379 2.9e-73 280.0 184 77.7
CBR_g48312 Chara braunii HOM05D006687 ORTHO05D008379 4.3e-45 186.4 165 51.5
Oeu042804.1 Olea europaea HOM05D006687 ORTHO05D008379 1.3e-38 164.9 188 48.4
Dinv10241 Davidia involucrata HOM05D006687 ORTHO05D008379 1.5e-37 161.4 191 49.7
PRCOL_00002517 Prasinoderma coloniale HOM05D006687 ORTHO05D008379 3.3e-37 160.2 476 27.3
Cre02.g104550 Chlamydomonas reinhardtii HOM05D006687 ORTHO05D008379 4.8e-36 156.4 495 26.5
MCO02G458 Micromonas commoda HOM05D006687 ORTHO05D008379 2.0e-34 151.0 440 29.1
Rhsim04G0201000 Rhododendron simsii HOM05D001311 ORTHO05D001204 5.4e-32 142.9 110 61.8
HanXRQChr12g0381471 Helianthus annuus HOM05D006687 ORTHO05D008379 1.7e-25 121.3 108 57.4
MD13G1132600 Malus domestica HOM05D006687 ORTHO05D008379 6.5e-25 119.4 70 81.4
MD09G1133500 Malus domestica HOM05D006687 ORTHO05D008379 1.1e-24 118.6 98 63.3
vmacro02845 Vaccinium macrocarpon HOM05D006687 ORTHO05D008379 8.7e-14 82.4 113 43.4


User provided reference genes

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