Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G011580 Citrullus lanatus HOM05D004110 ORTHO05D004810 7.7e-158 560.5 288 100.0
CsaV3_2G015750 Cucumis sativus L. HOM05D004110 ORTHO05D004810 2.1e-110 402.9 232 89.7
Sed0006799 Sechium edule HOM05D004110 ORTHO05D004810 6.6e-109 397.9 232 87.5
Cfa005187 Carpinus fangiana HOM05D004110 ORTHO05D004810 3.9e-85 318.9 215 73.5
RcHm_v2.0_Chr6g0245151 Rosa chinensis HOM05D004110 ORTHO05D004810 2.8e-83 312.8 215 71.2
QL11p047649 Quercus lobata HOM05D004110 ORTHO05D004810 6.3e-83 311.6 215 70.2
MD05G1116500 Malus domestica HOM05D004110 ORTHO05D004810 8.2e-83 311.2 215 71.2
Haze_02194 Corylus avellana HOM05D004110 ORTHO05D004810 9.0e-82 307.8 252 63.5
GSVIVG01024075001 Vitis vinifera HOM05D004110 ORTHO05D004810 2.0e-81 306.6 232 64.7
CANSAT25G3021 Cannabis sativa HOM05D004110 ORTHO05D004810 1.0e-80 304.3 228 67.5
MD10G1119400 Malus domestica HOM05D004110 ORTHO05D004810 2.2e-80 303.1 215 69.3
Manes.04G077900 Manihot esculenta HOM05D004110 ORTHO05D004810 2.2e-80 303.1 232 65.5
Dinv04965 Davidia involucrata HOM05D004110 ORTHO05D004810 6.5e-80 301.6 232 65.1
FvH4_2g01950 Fragaria vesca HOM05D004110 ORTHO05D004810 6.5e-80 301.6 215 68.8
Cpa.g.sc37.188 Carica papaya HOM05D004110 ORTHO05D004810 8.5e-80 301.2 215 69.3
FAN24G2945 Fragaria x ananassa HOM05D004110 ORTHO05D004810 1.1e-79 300.8 215 68.8
CiPaw.06G125000 Carya illinoinensis HOM05D004110 ORTHO05D004810 4.2e-79 298.9 232 65.5
Thecc.02G066600 Theobroma cacao HOM05D004110 ORTHO05D004810 7.2e-79 298.1 215 67.4
FAN15G2714 Fragaria x ananassa HOM05D004110 ORTHO05D004810 2.7e-78 296.2 215 67.9
Prupe.8G161000 Prunus persica HOM05D004110 ORTHO05D004810 4.6e-78 295.4 215 66.5
Actinidia29167 Actinidia chinensis HOM05D004110 ORTHO05D004810 6.1e-78 295.0 215 66.5
Ciclev10027667m.g Citrus clementina HOM05D004110 ORTHO05D004810 7.9e-78 294.7 232 63.4
THA.LOC104824773 Tarenaya hassleriana HOM05D004110 ORTHO05D004810 1.3e-77 293.9 228 64.9
PGR142G1237 Punica granatum HOM05D004110 ORTHO05D004810 1.5e-76 290.4 214 66.4
Potri.009G130000 Populus trichocarpa HOM05D004110 ORTHO05D004810 2.5e-76 289.7 215 66.0
Sp7g37050 Schrenkiella parvula HOM05D004110 ORTHO05D004810 2.5e-76 289.7 228 64.0
TAR376G1212 Trochodendron aralioides HOM05D004110 ORTHO05D004810 2.5e-76 289.7 217 63.6
AL7G10630 Arabidopsis lyrata HOM05D004110 ORTHO05D004810 3.3e-76 289.3 228 63.6
A06p48910 Brassica napus HOM05D004110 ORTHO05D004810 4.3e-76 288.9 228 63.2
FAN20G3101 Fragaria x ananassa HOM05D004110 ORTHO05D004810 4.3e-76 288.9 215 66.5
vmacro17378 Vaccinium macrocarpon HOM05D004110 ORTHO05D004810 4.3e-76 288.9 215 65.6
BraA06t27759Z Brassica rapa HOM05D004110 ORTHO05D004810 5.7e-76 288.5 228 62.7
Gohir.A12G039200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 1.6e-75 287.0 216 65.3
AT4G38760 Arabidopsis thaliana HOM05D004110 ORTHO05D004810 2.2e-75 286.6 228 63.2
Carub.0007s0061 Capsella rubella HOM05D004110 ORTHO05D004810 2.2e-75 286.6 228 62.7
Rhsim05G0062900 Rhododendron simsii HOM05D004110 ORTHO05D004810 2.8e-75 286.2 215 64.7
BcaNung01969 Brassica carinata HOM05D004110 ORTHO05D004810 3.7e-75 285.8 228 61.4
Lsat_1_v5_gn_4_74700 Lactuca sativa HOM05D004110 ORTHO05D004810 3.7e-75 285.8 232 62.1
Lj5C184G3 Lonicera japonica HOM05D004110 ORTHO05D004810 8.2e-75 284.6 256 56.6
C07p63600 Brassica napus HOM05D004110 ORTHO05D004810 1.4e-74 283.9 228 61.4
BolC7t46773H Brassica oleracea HOM05D004110 ORTHO05D004810 1.4e-74 283.9 228 61.4
DCAR_022780 Daucus carota HOM05D004110 ORTHO05D004810 1.8e-74 283.5 232 60.3
Gohir.D12G033200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 3.1e-74 282.7 216 64.4
Thhalv10024188m.g Eutrema salsugineum HOM05D004110 ORTHO05D004810 9.0e-74 281.2 228 61.4
Gorai.008G034000 Gossypium raimondii HOM05D004110 ORTHO05D004810 1.5e-73 280.4 216 63.9
PSO675G3689 Papaver somniferum HOM05D004110 ORTHO05D004810 1.5e-73 280.4 215 62.8
TWI79G0689 Tripterygium wilfordii HOM05D004110 ORTHO05D004810 4.5e-73 278.9 232 62.1
MSTRG.20018 Avicennia marina HOM05D004110 ORTHO05D004810 5.9e-73 278.5 232 61.2
Oeu014463.1 Olea europaea HOM05D004110 ORTHO05D004810 1.3e-72 277.3 215 63.7
Sabra09G0099400 Salix brachista HOM05D004110 ORTHO05D004810 1.3e-72 277.3 232 60.3
Sc18g0006650 Simmondsia chinensis HOM05D004110 ORTHO05D004810 2.2e-72 276.6 233 57.9
ECA234G0434 Erigeron canadensis HOM05D004110 ORTHO05D004810 3.8e-72 275.8 232 59.9
Nitab4.5_0006590g0020 Nicotiana tabacum HOM05D004110 ORTHO05D004810 3.8e-72 275.8 232 59.1
PSO541G0713 Papaver somniferum HOM05D004110 ORTHO05D004810 8.5e-72 274.6 232 59.1
Migut.B00121 Erythranthe guttata HOM05D004110 ORTHO05D004810 1.4e-71 273.9 215 62.8
Sopen11g016530 Solanum pennellii HOM05D004110 ORTHO05D004810 4.2e-71 272.3 228 58.8
Psat7g138160 Pisum sativum HOM05D004110 ORTHO05D004810 7.2e-71 271.6 215 62.3
Solyc11g039880.2 Solanum lycopersicum HOM05D004110 ORTHO05D004810 7.2e-71 271.6 228 58.3
SGA_v2.0_scaffold58G20427 Striga asiatica HOM05D004110 ORTHO05D004810 1.6e-70 270.4 215 61.4
Cc02_g16480 Coffea canephora HOM05D004110 ORTHO05D004810 3.6e-70 269.2 231 58.9
HanXRQChr10g0299011 Helianthus annuus HOM05D004110 ORTHO05D004810 6.1e-70 268.5 232 60.3
Lj3g0009405 Lotus japonicus HOM05D004110 ORTHO05D004810 2.3e-69 266.5 215 60.5
Nitab4.5_0007580g0010 Nicotiana tabacum HOM05D004110 ORTHO05D004810 2.3e-69 266.5 239 56.1
TPR.G17192 Trifolium pratense HOM05D004110 ORTHO05D004810 5.1e-69 265.4 215 60.5
Ca_19005_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 2.0e-68 263.5 232 56.9
Ca_30033_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 2.0e-68 263.5 232 56.9
Medtr4g075330 Medicago truncatula HOM05D004110 ORTHO05D004810 2.0e-68 263.5 232 57.8
Peaxi162Scf00684g00023 Petunia axillaris HOM05D004110 ORTHO05D004810 2.0e-68 263.5 232 57.3
EL10Ac9g21435 Beta vulgaris HOM05D004110 ORTHO05D004810 3.3e-68 262.7 266 51.1
Glyma.12G024600 Glycine max HOM05D004110 ORTHO05D004810 4.4e-68 262.3 215 59.5
Aa31LG6G16440 Aethionema arabicum HOM05D004110 ORTHO05D004810 7.4e-68 261.5 228 58.3
Ah.01g022610 Amaranthus hybridus HOM05D004110 ORTHO05D004810 1.7e-67 260.4 232 54.7
arahy.Tifrunner.gnm1.ann1.5454UR Arachis hypogaea HOM05D004110 ORTHO05D004810 8.2e-67 258.1 215 59.5
Aqoxy2G01068 Aquilegia oxysepala HOM05D004110 ORTHO05D004810 2.4e-66 256.5 215 60.5
arahy.Tifrunner.gnm1.ann1.6KB8MN Arachis hypogaea HOM05D004110 ORTHO05D004810 3.1e-66 256.1 215 59.1
Lalb_Chr01g0001341 Lupinus albus HOM05D004110 ORTHO05D004810 5.3e-66 255.4 215 58.6
Phvul.011G026800 Phaseolus vulgaris HOM05D004110 ORTHO05D004810 9.1e-66 254.6 215 58.6
Glyma.11G098551 Glycine max HOM05D004110 ORTHO05D004810 3.8e-64 249.2 227 54.2
CAN.G603.2 Capsicum annuum HOM05D004110 ORTHO05D004810 8.5e-64 248.1 253 51.4
Nn5g29099 Nelumbo nucifera HOM05D004110 ORTHO05D004810 1.1e-63 247.7 208 57.2
ATR0810G267 Amborella trichopoda HOM05D004110 ORTHO05D004810 3.2e-63 246.1 232 52.6
AUR62013086 Chenopodium quinoa HOM05D004110 ORTHO05D004810 1.4e-61 240.7 251 49.4
MBI05_g07505_MAGBIO Magnolia biondii HOM05D004110 ORTHO05D004810 8.8e-61 238.0 250 50.8
CDE05G0764 Ceratophyllum demersum HOM05D004110 ORTHO05D004810 3.1e-58 229.6 215 52.6
HPP92_005008 Vanilla planifolia HOM05D004110 ORTHO05D004810 9.1e-58 228.0 235 48.5
SHI05691 Sapria himalayana HOM05D004110 ORTHO05D004810 2.6e-57 226.5 225 51.1
Hund00042 Selenicereus undatus HOM05D004110 ORTHO05D004810 2.3e-53 213.4 232 47.4
Eucgr.I01378 Eucalyptus grandis HOM05D004110 ORTHO05D004810 9.7e-52 208.0 166 65.1
SEGI_22139 Sequoiadendron giganteum HOM05D004110 ORTHO05D004810 2.6e-44 183.3 223 41.7
CSS0003289 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 1.2e-41 174.5 120 68.3
Pp3c5_12360 Physcomitrium patens HOM05D004110 ORTHO05D004810 1.3e-40 171.0 225 40.4
Duzib248G1214 Durio zibethinus HOM05D004110 ORTHO05D004810 5.0e-40 169.1 123 65.0
Mapoly0001s0208 Marchantia polymorpha HOM05D004110 ORTHO05D004810 5.2e-37 159.1 232 34.9
unitig_21.g20818 Utricularia gibba HOM05D004110 ORTHO05D004810 1.3e-35 154.5 224 41.1
AagrBONN_evm.TU.Sc2ySwM_344.4164 Anthoceros agrestis HOM05D004110 ORTHO05D004810 8.9e-29 131.7 247 32.0
CSS0015162 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 1.3e-27 127.9 101 62.4
Psat1g093160 Pisum sativum HOM05D004110 ORTHO05D004810 3.3e-15 86.7 71 53.5
HanXRQChr09g0252681 Helianthus annuus HOM05D004110 ORTHO05D004810 1.4e-10 71.2 51 60.8
VMungo0464G1786 Vigna mungo HOM05D004110 ORTHO05D004810 2.1e-09 67.4 56 55.4


User provided reference genes

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