Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G011250 Citrullus lanatus HOM05D002194 ORTHO05D010880 3.9e-27 124.0 60 100.0
ClCG06G017240 Citrullus lanatus HOM05D002194 ORTHO05D010880 8.0e-25 116.3 58 98.3
ClCG00G004310 Citrullus lanatus HOM05D002194 ORTHO05D010880 5.2e-24 113.6 58 98.3
Lalb_Chr23g0274491 Lupinus albus HOM05D002194 ORTHO05D010880 3.4e-23 110.9 57 96.5
Medtr4g050850 Medicago truncatula HOM05D002194 ORTHO05D002840 2.4e-21 104.8 57 91.2
Nitab4.5_0002611g0090 Nicotiana tabacum HOM05D002194 ORTHO05D010880 1.2e-17 92.4 51 94.1
arahy.Tifrunner.gnm1.ann1.P1LA7E Arachis hypogaea HOM05D002194 ORTHO05D002840 1.4e-16 89.0 60 78.3
Nitab4.5_0001783g0080 Nicotiana tabacum HOM05D002194 ORTHO05D002840 4.0e-16 87.4 51 84.3
SalBow1G3226 Salvia bowleyana HOM05D002194 ORTHO05D010880 5.2e-16 87.0 44 97.7
Nitab4.5_0001379g0060 Nicotiana tabacum HOM05D002194 ORTHO05D010880 1.7e-14 82.0 46 84.8
Gohir.D11G308550 Gossypium hirsutum HOM05D002194 ORTHO05D010880 6.4e-14 80.1 41 95.1
Gohir.A01G150018 Gossypium hirsutum HOM05D002194 ORTHO05D010880 8.3e-14 79.7 40 97.5
BolSC29t60470H Brassica oleracea HOM05D002194 ORTHO05D010880 2.4e-13 78.2 39 100.0
BolSC29t60593H Brassica oleracea HOM05D002194 ORTHO05D010880 2.4e-13 78.2 39 100.0
BolSC35t60746H Brassica oleracea HOM05D002194 ORTHO05D010880 2.4e-13 78.2 39 100.0
BolSC46t61004H Brassica oleracea HOM05D002194 ORTHO05D010880 2.4e-13 78.2 39 100.0
BolSC46t61031H Brassica oleracea HOM05D002194 ORTHO05D010880 2.4e-13 78.2 39 100.0
BolSC47t61093H Brassica oleracea HOM05D002194 ORTHO05D010880 2.4e-13 78.2 39 100.0
BolSC49t61179H Brassica oleracea HOM05D002194 ORTHO05D010880 2.4e-13 78.2 39 100.0
BraA06t25419Z Brassica rapa HOM05D002194 ORTHO05D010880 2.4e-13 78.2 39 100.0
BraSC103t45462Z Brassica rapa HOM05D002194 ORTHO05D010880 2.4e-13 78.2 39 100.0
BraSC103t45470Z Brassica rapa HOM05D002194 ORTHO05D010880 2.4e-13 78.2 39 100.0
BraSC138t45572Z Brassica rapa HOM05D002194 ORTHO05D010880 2.4e-13 78.2 39 100.0
BraSC25t45862Z Brassica rapa HOM05D002194 ORTHO05D010880 2.4e-13 78.2 39 100.0
BraSC58t46424Z Brassica rapa HOM05D002194 ORTHO05D010880 2.4e-13 78.2 39 100.0
BraSC59t46587Z Brassica rapa HOM05D002194 ORTHO05D010880 2.4e-13 78.2 39 100.0
Gohir.1Z050080 Gossypium hirsutum HOM05D002194 ORTHO05D010880 2.4e-13 78.2 39 100.0
Gohir.A05G086232 Gossypium hirsutum HOM05D002194 ORTHO05D010880 2.4e-13 78.2 39 100.0
Gohir.D01G101917 Gossypium hirsutum HOM05D002194 ORTHO05D010880 2.4e-13 78.2 39 100.0
Gohir.D11G239900 Gossypium hirsutum HOM05D002194 ORTHO05D010880 2.4e-13 78.2 39 100.0
Os03g0667201 Oryza sativa ssp. japonica HOM05D002194 ORTHO05D010880 2.4e-13 78.2 39 100.0
PSO548G0107 Papaver somniferum HOM05D002194 ORTHO05D010880 2.4e-13 78.2 39 100.0
Potri.013G162100 Populus trichocarpa HOM05D002194 ORTHO05D010880 2.4e-13 78.2 39 100.0
AL2G21580 Arabidopsis lyrata HOM05D002194 ORTHO05D002840 7.1e-13 76.6 40 95.0
FAN01G1944 Fragaria x ananassa HOM05D002194 ORTHO05D002840 7.1e-13 76.6 52 67.3
Gorai.007G253400 Gossypium raimondii HOM05D002194 ORTHO05D010880 7.1e-13 76.6 39 97.4
Nitab4.5_0000172g0320 Nicotiana tabacum HOM05D002194 ORTHO05D002840 7.1e-13 76.6 56 71.4
ATCG00560 Arabidopsis thaliana HOM05D002194 ORTHO05D010880 9.2e-13 76.3 39 97.4
DCAR_032499 Daucus carota HOM05D002194 ORTHO05D010880 9.2e-13 76.3 39 97.4
LjContig00318g0008472 Lotus japonicus HOM05D002194 ORTHO05D002840 9.2e-13 76.3 41 92.7
ClCG02G011240 Citrullus lanatus HOM05D008644 ORTHO05D010816 1.2e-12 75.9 36 97.2
Peaxi162Scf00225g00087 Petunia axillaris HOM05D002194 ORTHO05D010880 1.2e-12 75.9 48 79.2
Gorai.007G008800 Gossypium raimondii HOM05D002194 ORTHO05D010880 1.6e-12 75.5 40 95.0
Nitab4.5_0011882g0070 Nicotiana tabacum HOM05D002194 ORTHO05D010880 2.7e-12 74.7 43 81.4
Gohir.D06G105440 Gossypium hirsutum HOM05D002194 ORTHO05D010880 4.6e-12 73.9 39 94.9
Nitab4.5_0000959g0050 Nicotiana tabacum HOM05D002194 ORTHO05D002840 6.0e-12 73.6 44 81.8
Lsat_1_v5_gn_1_27981 Lactuca sativa HOM05D002194 ORTHO05D002840 1.0e-11 72.8 38 86.8
Lsat_1_v5_gn_1_38741 Lactuca sativa HOM05D002194 ORTHO05D002840 1.0e-11 72.8 38 86.8
Lsat_1_v5_gn_2_43901 Lactuca sativa HOM05D002194 ORTHO05D002840 1.0e-11 72.8 38 86.8
Lsat_1_v5_gn_9_50921 Lactuca sativa HOM05D002194 ORTHO05D002840 1.0e-11 72.8 38 86.8
Nitab4.5_0001127g0300 Nicotiana tabacum HOM05D002194 ORTHO05D002840 6.6e-11 70.1 47 76.6
Gohir.D01G028900 Gossypium hirsutum HOM05D002194 ORTHO05D010880 1.5e-10 68.9 39 87.2
arahy.Tifrunner.gnm1.ann1.U2P2B1 Arachis hypogaea HOM05D002194 ORTHO05D010880 1.9e-10 68.6 35 91.4
CAN.G841.3 Capsicum annuum HOM05D002194 ORTHO05D010880 1.9e-10 68.6 39 89.7
Nitab4.5_0000172g1660 Nicotiana tabacum HOM05D002194 ORTHO05D010880 4.3e-10 67.4 41 78.0
Nitab4.5_0001170g0120 Nicotiana tabacum HOM05D002194 ORTHO05D002840 1.6e-09 65.5 49 65.3
MBI05_g40996_MAGBIO Magnolia biondii HOM05D002194 ORTHO05D002840 2.8e-09 64.7 34 88.2
Peaxi162Scf00413g00830 Petunia axillaris HOM05D002194 ORTHO05D010880 1.4e-08 62.4 33 84.8
MBI04_g06628_MAGBIO Magnolia biondii HOM05D002194 ORTHO05D002840 4.0e-08 60.8 34 85.3
Nitab4.5_0001506g0030 Nicotiana tabacum HOM05D008793 ORTHO05D013999 1.7e-06 55.5 30 90.0


User provided reference genes

Program Settings