Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G024810 Citrullus lanatus HOM05D004841 ORTHO05D005874 2.3e-182 642.1 324 100.0
Sed0021741 Sechium edule HOM05D004841 ORTHO05D005874 7.6e-162 573.9 346 84.4
MELO3C007114.2 Cucumis melo HOM05D004841 ORTHO05D005874 1.6e-159 566.2 339 84.1
CsaV3_6G051930 Cucumis sativus L. HOM05D004841 ORTHO05D005874 2.3e-158 562.4 339 83.8
MD05G1280700 Malus domestica HOM05D004841 ORTHO05D005874 5.9e-130 468.0 334 70.7
Prupe.4G084200 Prunus persica HOM05D004841 ORTHO05D005874 1.7e-129 466.5 334 71.3
MD10G1259100 Malus domestica HOM05D004841 ORTHO05D005874 9.7e-125 450.7 334 68.0
Manes.17G073300 Manihot esculenta HOM05D004841 ORTHO05D005874 1.3e-124 450.3 334 67.7
GSVIVG01034157001 Vitis vinifera HOM05D004841 ORTHO05D005874 1.4e-123 446.8 333 68.2
CANSAT11G1247 Cannabis sativa HOM05D004841 ORTHO05D005874 5.3e-123 444.9 339 65.8
RcHm_v2.0_Chr5g0014571 Rosa chinensis HOM05D004841 ORTHO05D005874 9.1e-123 444.1 334 68.0
CiPaw.10G089600 Carya illinoinensis HOM05D004841 ORTHO05D005874 3.5e-122 442.2 329 69.3
CiPaw.09G120900 Carya illinoinensis HOM05D004841 ORTHO05D005874 1.0e-121 440.7 334 69.5
FAN21G1690 Fragaria x ananassa HOM05D004841 ORTHO05D005874 2.9e-121 439.1 329 69.0
FvH4_3g05180 Fragaria vesca HOM05D004841 ORTHO05D005874 6.5e-121 438.0 329 68.7
CSS0019612 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 8.5e-121 437.6 334 65.9
CSS0027900 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 8.5e-121 437.6 334 65.9
FAN11G3214 Fragaria x ananassa HOM05D004841 ORTHO05D005874 8.5e-121 437.6 329 68.7
FAN25G3271 Fragaria x ananassa HOM05D004841 ORTHO05D005874 8.5e-121 437.6 329 68.7
PGR031G1170 Punica granatum HOM05D004841 ORTHO05D005874 1.1e-120 437.2 330 67.9
FAN16G1445 Fragaria x ananassa HOM05D004841 ORTHO05D005874 5.5e-120 434.9 329 68.1
FAN16G2733 Fragaria x ananassa HOM05D004841 ORTHO05D005874 5.5e-120 434.9 329 68.4
Cfa000914 Carpinus fangiana HOM05D004841 ORTHO05D005874 2.1e-119 433.0 337 67.1
Potri.012G107400 Populus trichocarpa HOM05D004841 ORTHO05D005874 2.1e-119 433.0 334 68.3
QL05p055481 Quercus lobata HOM05D004841 ORTHO05D005874 2.1e-119 433.0 336 67.6
Atru.chr10.1099 Acer truncatum HOM05D004841 ORTHO05D005874 2.7e-119 432.6 337 67.1
TWI63G0939 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 1.8e-118 429.9 334 65.3
Eucgr.E02427 Eucalyptus grandis HOM05D004841 ORTHO05D005874 2.3e-118 429.5 335 67.2
TWI34G1122 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 3.0e-118 429.1 334 65.3
Hma1.2p1_0594F.1_g185890 Hydrangea macrophylla HOM05D004841 ORTHO05D005874 5.2e-118 428.3 333 64.3
Sabra13G0019700 Salix brachista HOM05D000092 ORTHO05D005874 6.7e-118 427.9 321 68.8
Haze_05641 Corylus avellana HOM05D004841 ORTHO05D005874 9.7e-117 424.1 325 67.7
Sopen02g023650 Solanum pennellii HOM05D004841 ORTHO05D005874 8.2e-116 421.0 333 66.7
Solyc02g078830.4 Solanum lycopersicum HOM05D004841 ORTHO05D005874 1.1e-115 420.6 333 66.4
Ciclev10015824m.g Citrus clementina HOM05D004841 ORTHO05D005874 1.4e-115 420.2 346 63.9
THA.LOC104821761 Tarenaya hassleriana HOM05D004841 ORTHO05D005874 1.4e-115 420.2 332 66.0
Lalb_Chr11g0073321 Lupinus albus HOM05D004841 ORTHO05D005874 1.8e-115 419.9 335 68.1
PGSC0003DMG400022420 Solanum tuberosum HOM05D004841 ORTHO05D005874 2.4e-115 419.5 333 65.8
MSTRG.7507 Avicennia marina HOM05D004841 ORTHO05D005874 4.1e-115 418.7 331 63.7
Nitab4.5_0004020g0010 Nicotiana tabacum HOM05D004841 ORTHO05D005874 4.1e-115 418.7 333 65.2
Gorai.011G046600 Gossypium raimondii HOM05D004841 ORTHO05D005874 2.0e-114 416.4 334 64.1
Actinidia01573 Actinidia chinensis HOM05D004841 ORTHO05D005874 2.6e-114 416.0 318 65.1
COL.COLO4_31030 Corchorus olitorius HOM05D004841 ORTHO05D005874 3.5e-114 415.6 334 64.1
Duzib235G0160 Durio zibethinus HOM05D004841 ORTHO05D005874 4.5e-114 415.2 338 63.6
Nitab4.5_0000501g0020 Nicotiana tabacum HOM05D004841 ORTHO05D005874 5.9e-114 414.8 333 65.2
BcaB05g24290 Brassica carinata HOM05D004841 ORTHO05D005874 7.7e-114 414.5 345 62.0
Rhsim13G0116700 Rhododendron simsii HOM05D004841 ORTHO05D005874 7.7e-114 414.5 337 63.2
Gohir.A10G042800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 1.0e-113 414.1 334 63.8
Gohir.D10G043800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 1.0e-113 414.1 334 64.1
AT1G65030 Arabidopsis thaliana HOM05D004841 ORTHO05D005874 2.2e-113 412.9 333 64.6
C06p42730 Brassica napus HOM05D004841 ORTHO05D005874 2.2e-113 412.9 338 62.7
A07p34060 Brassica napus HOM05D004841 ORTHO05D005874 2.9e-113 412.5 338 62.4
Sp5g22530 Schrenkiella parvula HOM05D004841 ORTHO05D005874 2.9e-113 412.5 345 62.9
Thhalv10018816m.g Eutrema salsugineum HOM05D004841 ORTHO05D005874 5.0e-113 411.8 345 63.5
BraA07t31032Z Brassica rapa HOM05D004841 ORTHO05D005874 8.5e-113 411.0 338 62.7
BcaB03g15189 Brassica carinata HOM05D004841 ORTHO05D005874 1.9e-112 409.8 338 62.4
A02p14280 Brassica napus HOM05D004841 ORTHO05D005874 1.9e-112 409.8 338 62.4
BraA02t06489Z Brassica rapa HOM05D004841 ORTHO05D005874 1.9e-112 409.8 338 62.1
Carub.0002s1024 Capsella rubella HOM05D004841 ORTHO05D005874 1.9e-112 409.8 343 63.6
Aa31LG2G2230 Aethionema arabicum HOM05D004841 ORTHO05D005874 2.5e-112 409.5 342 62.9
Peaxi162Scf00465g00119 Petunia axillaris HOM05D004841 ORTHO05D005874 2.5e-112 409.5 332 64.8
C02p23090 Brassica napus HOM05D004841 ORTHO05D005874 7.2e-112 407.9 345 62.0
AL2G19660 Arabidopsis lyrata HOM05D004841 ORTHO05D005874 1.2e-111 407.1 342 63.2
CARHR056500 Cardamine hirsuta HOM05D004841 ORTHO05D005874 1.2e-111 407.1 342 62.9
BolC2t08451H Brassica oleracea HOM05D004841 ORTHO05D005874 2.1e-111 406.4 345 61.7
C06p42780 Brassica napus HOM05D004841 ORTHO05D005874 2.7e-111 406.0 338 62.1
Migut.M00886 Erythranthe guttata HOM05D004841 ORTHO05D005874 3.6e-111 405.6 332 62.3
Thecc.06G146500 Theobroma cacao HOM05D004841 ORTHO05D005874 3.6e-111 405.6 336 63.4
Ca_03447_v3 Cicer arietinum L. HOM05D004841 ORTHO05D005874 8.0e-111 404.4 328 63.4
BolC6t39162H Brassica oleracea HOM05D004841 ORTHO05D005874 1.0e-110 404.1 367 58.3
TAR628G1076 Trochodendron aralioides HOM05D004841 ORTHO05D005874 2.3e-110 402.9 333 63.1
arahy.Tifrunner.gnm1.ann1.0DR3QG Arachis hypogaea HOM05D004841 ORTHO05D005874 6.8e-110 401.4 334 64.4
arahy.Tifrunner.gnm1.ann1.9IA9LY Arachis hypogaea HOM05D004841 ORTHO05D005874 8.8e-110 401.0 318 66.0
TPR.G29935 Trifolium pratense HOM05D004841 ORTHO05D005874 1.2e-109 400.6 336 63.4
vmacro03353 Vaccinium macrocarpon HOM05D004841 ORTHO05D005874 2.6e-109 399.4 334 61.7
Psat1g020080 Pisum sativum HOM05D004841 ORTHO05D005874 4.4e-109 398.7 337 62.3
arahy.Tifrunner.gnm1.ann1.4L8DWS Arachis hypogaea HOM05D004841 ORTHO05D005874 5.7e-109 398.3 334 64.1
arahy.Tifrunner.gnm1.ann1.V1DCF9 Arachis hypogaea HOM05D004841 ORTHO05D005874 5.7e-109 398.3 318 66.4
Medtr2g049300 Medicago truncatula HOM05D004841 ORTHO05D005874 5.7e-109 398.3 325 64.0
Nn3g20436 Nelumbo nucifera HOM05D004841 ORTHO05D005874 7.5e-109 397.9 325 61.5
Lsat_1_v5_gn_4_29561 Lactuca sativa HOM05D004841 ORTHO05D005874 1.8e-107 393.3 338 62.1
SGA_v2.0_scaffold146G36131 Striga asiatica HOM05D004841 ORTHO05D005874 3.1e-107 392.5 318 63.2
Oeu013128.1 Olea europaea HOM05D004841 ORTHO05D005874 9.1e-107 391.0 333 60.4
Glyma.09G086200 Glycine max HOM05D004841 ORTHO05D005874 1.3e-105 387.1 327 63.0
HanXRQChr17g0564621 Helianthus annuus HOM05D004841 ORTHO05D005874 3.8e-105 385.6 335 60.0
Dinv21532 Davidia involucrata HOM05D004841 ORTHO05D005874 5.0e-105 385.2 333 61.0
DCAR_027897 Daucus carota HOM05D004841 ORTHO05D005874 1.1e-104 384.0 334 59.9
Glyma.15G195000 Glycine max HOM05D004841 ORTHO05D005874 2.5e-104 382.9 330 62.1
MBI02_g29870_MAGBIO Magnolia biondii HOM05D004841 ORTHO05D005874 1.2e-103 380.6 330 59.1
Cc02_g29720 Coffea canephora HOM05D004841 ORTHO05D005874 2.1e-103 379.8 336 59.2
Sc02g0001540 Simmondsia chinensis HOM05D004841 ORTHO05D005874 8.0e-103 377.9 323 60.1
Lj2A321T65 Lonicera japonica HOM05D004841 ORTHO05D005874 1.4e-102 377.1 321 60.1
Lj6g0003285 Lotus japonicus HOM05D004841 ORTHO05D005874 2.3e-102 376.3 346 58.4
BcaNung05075 Brassica carinata HOM05D004841 ORTHO05D005874 6.8e-102 374.8 338 58.6
Phvul.009G215400 Phaseolus vulgaris HOM05D004841 ORTHO05D005874 1.5e-101 373.6 335 60.3
VMungo1309G2918 Vigna mungo HOM05D004841 ORTHO05D005874 3.7e-100 369.0 330 60.6
PSO541G1633 Papaver somniferum HOM05D004841 ORTHO05D005874 1.6e-98 363.6 329 56.2
PSO675G7289 Papaver somniferum HOM05D004841 ORTHO05D005874 1.6e-98 363.6 329 56.2
Hund20587 Selenicereus undatus HOM05D004841 ORTHO05D005874 2.9e-97 359.4 339 57.2
EL10Ac7g16662 Beta vulgaris HOM05D004841 ORTHO05D005874 3.8e-97 359.0 336 58.3
Ah.08g211520 Amaranthus hybridus HOM05D004841 ORTHO05D005874 9.5e-96 354.4 332 58.1
ECA234G4271 Erigeron canadensis HOM05D004841 ORTHO05D005874 4.7e-95 352.1 336 54.8
Dinv32222 Davidia involucrata HOM05D004841 ORTHO05D005874 2.3e-94 349.7 260 65.4
SalBow8G2637 Salvia bowleyana HOM05D004841 ORTHO05D005874 4.0e-94 349.0 303 61.4
PSO017G5522 Papaver somniferum HOM05D004841 ORTHO05D005874 1.5e-93 347.1 320 56.6
Aqoxy5G03944 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 4.9e-92 342.0 316 55.4
Aqoxy7G03441 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 9.2e-91 337.8 316 54.7
SHI02861 Sapria himalayana HOM05D004841 ORTHO05D005874 1.6e-90 337.0 288 58.0
HPP92_012189 Vanilla planifolia HOM05D004841 ORTHO05D005874 1.6e-87 327.0 320 53.1
AUR62026924 Chenopodium quinoa HOM05D004841 ORTHO05D005874 3.3e-72 276.2 254 58.7
ATR0772G214 Amborella trichopoda HOM05D004841 ORTHO05D005874 5.6e-72 275.4 323 43.7
Zm00001eb328580 Zea mays HOM05D004841 ORTHO05D005874 4.9e-68 262.3 332 46.4
SEGI_08519 Sequoiadendron giganteum HOM05D004841 ORTHO05D005874 1.1e-67 261.2 368 39.1
CDE07G1158 Ceratophyllum demersum HOM05D004841 ORTHO05D005874 1.5e-64 250.8 215 57.7
Sabra13G0018400 Salix brachista HOM05D004841 ORTHO05D004358 4.4e-61 239.2 150 74.0
Mapoly0001s0498 Marchantia polymorpha HOM05D004841 ORTHO05D005874 1.9e-59 233.8 316 38.6
unitig_749.g13802 Utricularia gibba HOM05D004841 ORTHO05D005874 9.9e-53 211.5 158 65.8
BcaNung05072 Brassica carinata HOM05D004841 ORTHO05D005874 4.8e-47 192.6 183 55.7
BcaNung05071 Brassica carinata HOM05D004841 ORTHO05D005874 4.0e-46 189.5 183 55.2
SMO358G0291 Selaginella moellendorffii HOM05D004841 ORTHO05D005874 4.5e-45 186.0 314 35.4
Os12g0615900 Oryza sativa ssp. japonica HOM05D004841 ORTHO05D005874 7.1e-43 178.7 255 42.7
AUR62042056 Chenopodium quinoa HOM05D004841 ORTHO05D005874 1.0e-41 174.9 181 52.5
Cre03.g205800 Chlamydomonas reinhardtii HOM05D004841 ORTHO05D005874 3.0e-41 173.3 289 36.7
Cpa.g.c47956 Carica papaya HOM05D004841 ORTHO05D005874 2.5e-32 143.7 100 64.0
CBR_g4467 Chara braunii HOM05D004841 ORTHO05D005874 2.8e-31 140.2 240 34.6
Cpa.g.sc17.34 Carica papaya HOM05D004841 ORTHO05D005874 4.1e-30 136.3 137 56.2
MCO15G572 Micromonas commoda HOM05D004841 ORTHO05D005874 1.3e-28 131.3 340 27.1
ATR1098G095 Amborella trichopoda HOM05D004841 ORTHO05D005874 6.5e-28 129.0 164 37.2
VMungo0251G1518 Vigna mungo HOM05D005230 ORTHO05D051605 6.5e-28 129.0 123 54.5
Oeu030952.1 Olea europaea HOM05D004841 ORTHO05D005874 3.2e-27 126.7 269 33.8
VMungo0720G0475 Vigna mungo HOM05D005230 ORTHO05D051605 3.2e-27 126.7 123 55.3
Oeu062572.1 Olea europaea HOM05D004841 ORTHO05D005874 4.6e-26 122.9 140 51.4
C06p41890 Brassica napus HOM05D004841 ORTHO05D005874 2.3e-25 120.6 94 63.8
BolC6t39240H Brassica oleracea HOM05D004841 ORTHO05D005874 2.3e-25 120.6 94 63.8
Hma1.2p1_0594F.1_g185900 Hydrangea macrophylla HOM05D004841 ORTHO05D005874 2.4e-22 110.5 83 69.9
Sabra13G0018300 Salix brachista HOM05D004841 ORTHO05D005874 9.0e-22 108.6 101 59.4
VMungo0331G1481 Vigna mungo HOM05D004841 ORTHO05D005874 9.0e-22 108.6 113 48.7
Sabra13G0014000 Salix brachista HOM05D000092 ORTHO05D000042 1.5e-21 107.8 79 69.6
Thhalv10019798m.g Eutrema salsugineum HOM05D004841 ORTHO05D005874 3.4e-21 106.7 124 53.2
Sabra13G0015400 Salix brachista HOM05D004841 ORTHO05D005874 3.4e-21 106.7 79 68.4
Sabra13G0014300 Salix brachista HOM05D004841 ORTHO05D005874 4.5e-21 106.3 77 70.1
Sabra13G0014700 Salix brachista HOM05D000070 ORTHO05D000047 4.5e-21 106.3 77 70.1
Sabra13G0015100 Salix brachista HOM05D004841 ORTHO05D005874 4.5e-21 106.3 77 70.1
Sabra13G0019300 Salix brachista HOM05D004841 ORTHO05D005874 4.5e-21 106.3 77 70.1
VMungo1382G0002 Vigna mungo HOM05D004841 ORTHO05D005874 8.5e-20 102.1 97 52.6
unitig_749.g13803 Utricularia gibba HOM05D004841 ORTHO05D005874 3.2e-19 100.1 121 48.8
Pp3c9_24890 Physcomitrium patens HOM05D004841 ORTHO05D005874 4.6e-18 96.3 184 32.6
Pp3c15_25070 Physcomitrium patens HOM05D004841 ORTHO05D005874 1.1e-16 91.7 171 33.3
AagrBONN_evm.TU.Sc2ySwM_117.2336 Anthoceros agrestis HOM05D004841 ORTHO05D005874 5.7e-16 89.4 178 34.3
Oeu030951.1 Olea europaea HOM05D004841 ORTHO05D005874 1.3e-12 78.2 128 40.6
Sabra13G0018600 Salix brachista HOM05D004841 ORTHO05D005874 2.5e-11 73.9 44 81.8
BcaC03g14843 Brassica carinata HOM05D004841 ORTHO05D005874 1.6e-10 71.2 48 68.8
Actinidia16778 Actinidia chinensis HOM05D004841 ORTHO05D005874 1.4e-09 68.2 58 58.6
VMungo0712G0001 Vigna mungo HOM05D004841 ORTHO05D005874 1.1e-08 65.1 115 40.9
MBI05_g03452_MAGBIO Magnolia biondii HOM05D007125 ORTHO05D008766 4.1e-06 56.6 114 33.3
CSS0003995 Camellia sinensis var. sinensis HOM05D007125 ORTHO05D008766 9.1e-06 55.5 221 26.7


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