Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G000680 Citrullus lanatus HOM05D004719 ORTHO05D005519 1.5e-136 489.6 251 100.0
MELO3C005862.2 Cucumis melo HOM05D004719 ORTHO05D005519 2.4e-99 365.9 251 80.5
CsaV3_5G000780 Cucumis sativus L. HOM05D004719 ORTHO05D005519 1.9e-96 356.3 251 77.7
Sed0016292 Sechium edule HOM05D004719 ORTHO05D005519 9.6e-88 327.4 252 71.0
Sed0024250 Sechium edule HOM05D004719 ORTHO05D005519 2.9e-84 315.8 251 70.9
TWI14G0874 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 2.8e-71 272.7 250 59.6
vmacro10099 Vaccinium macrocarpon HOM05D004719 ORTHO05D005519 2.8e-71 272.7 253 58.9
Manes.06G156000 Manihot esculenta HOM05D004719 ORTHO05D005519 8.2e-71 271.2 230 63.9
Gohir.A11G013800 Gossypium hirsutum HOM05D004719 ORTHO05D005519 1.4e-70 270.4 256 59.8
TAR333G0005 Trochodendron aralioides HOM05D004719 ORTHO05D005519 1.8e-70 270.0 252 58.7
Dinv35299 Davidia involucrata HOM05D004719 ORTHO05D005519 2.4e-70 269.6 253 60.5
Duzib084G0320 Durio zibethinus HOM05D004719 ORTHO05D005519 6.9e-70 268.1 260 57.7
Nn7g37372 Nelumbo nucifera HOM05D004719 ORTHO05D005519 2.0e-69 266.5 252 57.5
Gohir.D11G014000 Gossypium hirsutum HOM05D004719 ORTHO05D005519 3.4e-69 265.8 256 59.0
Gorai.007G014400 Gossypium raimondii HOM05D004719 ORTHO05D005519 3.4e-69 265.8 257 59.5
TWI23G0029 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 5.8e-69 265.0 250 57.2
Nn1g01780 Nelumbo nucifera HOM05D004719 ORTHO05D005519 2.2e-68 263.1 252 57.5
Duzib068G0142 Durio zibethinus HOM05D004719 ORTHO05D005519 8.4e-68 261.2 251 57.4
Thecc.03G191400 Theobroma cacao HOM05D004719 ORTHO05D005519 1.4e-67 260.4 256 58.2
Hma1.2p1_0142F.1_g064100 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 2.5e-67 259.6 248 58.5
Prupe.2G306000 Prunus persica HOM05D004719 ORTHO05D005519 4.2e-67 258.8 260 58.1
CSS0006896 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 1.2e-66 257.3 254 59.1
CSS0042605 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 1.2e-66 257.3 254 59.1
Rhsim09G0203300 Rhododendron simsii HOM05D004719 ORTHO05D005519 2.1e-66 256.5 269 55.4
TWI39G0409 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 2.7e-66 256.1 247 57.9
Atru.chr1.287 Acer truncatum HOM05D004719 ORTHO05D005519 3.5e-66 255.8 256 60.5
Potri.012G033300 Populus trichocarpa HOM05D004719 ORTHO05D005519 1.3e-65 253.8 252 56.0
CiPaw.06G006600 Carya illinoinensis HOM05D004719 ORTHO05D005519 1.8e-65 253.4 230 62.2
Duzib205G0172 Durio zibethinus HOM05D004719 ORTHO05D005519 2.3e-65 253.1 252 56.3
Aqoxy5G04028 Aquilegia oxysepala HOM05D004719 ORTHO05D005519 1.1e-64 250.8 251 58.6
Cfa016352 Carpinus fangiana HOM05D004719 ORTHO05D005519 1.1e-64 250.8 258 58.9
Haze_00101 Corylus avellana HOM05D004719 ORTHO05D005519 1.1e-64 250.8 265 58.9
QL09p011210 Quercus lobata HOM05D004719 ORTHO05D005519 1.3e-63 247.3 259 57.9
Hma1.2p1_1891F.1_g306690 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 1.6e-63 246.9 248 57.3
Cc02_g02010 Coffea canephora HOM05D004719 ORTHO05D005519 3.1e-62 242.7 254 59.8
Cpa.g.sc3.37 Carica papaya HOM05D004719 ORTHO05D005519 6.9e-62 241.5 254 56.7
TAR374G0131 Trochodendron aralioides HOM05D004719 ORTHO05D005519 1.2e-61 240.7 213 60.1
Actinidia31859 Actinidia chinensis HOM05D004719 ORTHO05D005519 4.5e-61 238.8 255 59.2
Ciclev10005830m.g Citrus clementina HOM05D004719 ORTHO05D005519 7.7e-61 238.0 256 55.1
PSO170G2586 Papaver somniferum HOM05D004719 ORTHO05D005519 1.7e-60 236.9 253 54.2
Hma1.2p1_0327F.1_g126670 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 2.9e-60 236.1 253 54.5
MD01G1213900 Malus domestica HOM05D004719 ORTHO05D005519 3.8e-60 235.7 262 55.0
PSO063G4149 Papaver somniferum HOM05D004719 ORTHO05D005519 3.8e-60 235.7 253 53.8
MD07G1283600 Malus domestica HOM05D004719 ORTHO05D005519 1.9e-59 233.4 262 52.7
Nitab4.5_0001331g0150 Nicotiana tabacum HOM05D004719 ORTHO05D005519 2.5e-59 233.0 257 52.1
Aa31LG3G9210 Aethionema arabicum HOM05D004719 ORTHO05D005519 4.2e-59 232.3 254 52.4
SalBow4G0130 Salvia bowleyana HOM05D004719 ORTHO05D005519 5.5e-59 231.9 257 49.8
Lj1g0014949 Lotus japonicus HOM05D004719 ORTHO05D005519 7.2e-59 231.5 255 52.5
SGA_v2.0_scaffold192G40593 Striga asiatica HOM05D004719 ORTHO05D005519 9.4e-59 231.1 259 50.2
MSTRG.8686 Avicennia marina HOM05D004719 ORTHO05D005519 4.6e-58 228.8 257 50.6
SalBow4G0254 Salvia bowleyana HOM05D004719 ORTHO05D005519 4.6e-58 228.8 257 49.4
THA.LOC104800282 Tarenaya hassleriana HOM05D004719 ORTHO05D005519 4.6e-58 228.8 255 53.3
Nitab4.5_0000472g0190 Nicotiana tabacum HOM05D004719 ORTHO05D005519 1.0e-57 227.6 257 51.0
CANSAT21G2536 Cannabis sativa HOM05D004719 ORTHO05D005519 5.1e-57 225.3 250 56.0
Sp6g15480 Schrenkiella parvula HOM05D004719 ORTHO05D005519 5.1e-57 225.3 256 51.2
arahy.Tifrunner.gnm1.ann1.A0EQPQ Arachis hypogaea HOM05D004719 ORTHO05D005519 1.1e-56 224.2 237 57.4
Oeu049096.1 Olea europaea HOM05D004719 ORTHO05D005519 1.5e-56 223.8 253 52.2
COL.COLO4_08254 Corchorus olitorius HOM05D004719 ORTHO05D005519 2.0e-56 223.4 181 64.1
Lalb_Chr23g0271411 Lupinus albus HOM05D004719 ORTHO05D005519 2.0e-56 223.4 255 53.3
Thhalv10014603m.g Eutrema salsugineum HOM05D004719 ORTHO05D005519 2.5e-56 223.0 256 52.7
Carub.0008s1351 Capsella rubella HOM05D004719 ORTHO05D005519 3.3e-56 222.6 258 55.4
Ah.07g206120 Amaranthus hybridus HOM05D004719 ORTHO05D005519 7.4e-56 221.5 257 51.4
AUR62021055 Chenopodium quinoa HOM05D004719 ORTHO05D005519 9.7e-56 221.1 256 55.9
Eucgr.A02672 Eucalyptus grandis HOM05D004719 ORTHO05D005519 2.2e-55 219.9 213 53.5
Phvul.008G159900 Phaseolus vulgaris HOM05D004719 ORTHO05D005519 2.8e-55 219.5 251 51.8
EL10Ac3g05361 Beta vulgaris HOM05D004719 ORTHO05D005519 3.7e-55 219.2 253 53.8
AUR62031477 Chenopodium quinoa HOM05D004719 ORTHO05D005519 4.8e-55 218.8 256 55.1
PGSC0003DMG400009067 Solanum tuberosum HOM05D004719 ORTHO05D005519 1.1e-54 217.6 258 49.6
THA.LOC104811935 Tarenaya hassleriana HOM05D004719 ORTHO05D005519 1.1e-54 217.6 260 53.8
Oeu009271.1 Olea europaea HOM05D004719 ORTHO05D005519 1.4e-54 217.2 262 48.5
FAN10G3127 Fragaria x ananassa HOM05D004719 ORTHO05D005519 2.4e-54 216.5 262 48.5
RcHm_v2.0_Chr1g0379961 Rosa chinensis HOM05D004719 ORTHO05D005519 2.4e-54 216.5 263 49.8
AL8G28040 Arabidopsis lyrata HOM05D004719 ORTHO05D005519 6.9e-54 214.9 256 50.8
DCAR_020296 Daucus carota HOM05D004719 ORTHO05D005519 9.1e-54 214.5 242 52.5
FAN03G2418 Fragaria x ananassa HOM05D004719 ORTHO05D005519 1.2e-53 214.2 263 47.9
FAN06G4721 Fragaria x ananassa HOM05D004719 ORTHO05D005519 1.5e-53 213.8 259 49.0
FAN01G1522 Fragaria x ananassa HOM05D004719 ORTHO05D005519 2.0e-53 213.4 268 47.4
Peaxi162Scf00904g00473 Petunia axillaris HOM05D004719 ORTHO05D005519 2.0e-53 213.4 254 48.4
Gohir.A09G183300 Gossypium hirsutum HOM05D004719 ORTHO05D005519 3.4e-53 212.6 233 50.2
arahy.Tifrunner.gnm1.ann1.YXX8CM Arachis hypogaea HOM05D004719 ORTHO05D005519 4.5e-53 212.2 237 57.4
FvH4_7g30890 Fragaria vesca HOM05D004719 ORTHO05D005519 4.5e-53 212.2 263 48.3
Migut.F00251 Erythranthe guttata HOM05D004719 ORTHO05D005519 7.7e-53 211.5 255 48.2
Gohir.D09G178000 Gossypium hirsutum HOM05D004719 ORTHO05D005519 1.0e-52 211.1 234 50.4
Potri.015G023600 Populus trichocarpa HOM05D004719 ORTHO05D005519 1.0e-52 211.1 251 49.0
Glyma.04G239200 Glycine max HOM05D004719 ORTHO05D005519 3.8e-52 209.1 251 48.6
A03p15190 Brassica napus HOM05D004719 ORTHO05D005519 5.0e-52 208.8 256 50.0
AT5G53330 Arabidopsis thaliana HOM05D004719 ORTHO05D005519 8.5e-52 208.0 257 50.2
Gorai.006G200100 Gossypium raimondii HOM05D004719 ORTHO05D005519 1.1e-51 207.6 234 50.0
Manes.14G019414 Manihot esculenta HOM05D004719 ORTHO05D005519 1.1e-51 207.6 206 55.8
Solyc03g007520.3 Solanum lycopersicum HOM05D004719 ORTHO05D005519 1.1e-51 207.6 254 48.8
PGR042G1451 Punica granatum HOM05D004719 ORTHO05D005519 1.4e-51 207.2 249 47.4
Sopen03g003480 Solanum pennellii HOM05D004719 ORTHO05D005519 2.5e-51 206.5 254 48.4
BraA03t10813Z Brassica rapa HOM05D004719 ORTHO05D005519 4.2e-51 205.7 256 49.2
Sc13g0009490 Simmondsia chinensis HOM05D004719 ORTHO05D005519 4.2e-51 205.7 177 59.9
Lsat_1_v5_gn_2_134381 Lactuca sativa HOM05D004719 ORTHO05D005519 5.5e-51 205.3 250 48.0
CAN.G108.16 Capsicum annuum HOM05D004719 ORTHO05D005519 1.6e-50 203.8 239 48.5
BcaNung06632 Brassica carinata HOM05D004719 ORTHO05D005519 2.7e-50 203.0 256 50.4
C03p17720 Brassica napus HOM05D004719 ORTHO05D005519 2.7e-50 203.0 256 50.4
MSTRG.27052 Avicennia marina HOM05D004719 ORTHO05D005519 3.6e-50 202.6 267 44.2
Lj1C1011G7 Lonicera japonica HOM05D004719 ORTHO05D005519 3.6e-50 202.6 132 74.2
Medtr3g090640 Medicago truncatula HOM05D004719 ORTHO05D005519 1.4e-49 200.7 174 59.2
BcaB08g35695 Brassica carinata HOM05D004719 ORTHO05D005519 2.3e-49 199.9 259 47.9
PGR142G1718 Punica granatum HOM05D004719 ORTHO05D005519 2.3e-49 199.9 264 45.8
Psat5g080520 Pisum sativum HOM05D004719 ORTHO05D005519 3.9e-49 199.1 227 53.3
unitig_747.g21854 Utricularia gibba HOM05D004719 ORTHO05D005519 3.9e-49 199.1 253 47.8
C09p43180 Brassica napus HOM05D004719 ORTHO05D005519 5.1e-49 198.7 252 47.2
HanXRQChr14g0462731 Helianthus annuus HOM05D004719 ORTHO05D005519 5.1e-49 198.7 255 49.8
Glyma.06G124600 Glycine max HOM05D004719 ORTHO05D005519 6.7e-49 198.4 251 47.8
BolC3t14182H Brassica oleracea HOM05D004719 ORTHO05D005519 2.0e-48 196.8 266 48.1
CARHR266390 Cardamine hirsuta HOM05D004719 ORTHO05D005519 2.0e-48 196.8 260 50.0
BcaC04g20465 Brassica carinata HOM05D004719 ORTHO05D005519 2.6e-48 196.4 252 46.8
HanXRQChr07g0207131 Helianthus annuus HOM05D004719 ORTHO05D005519 2.6e-48 196.4 251 47.0
MBI06_g04286_MAGBIO Magnolia biondii HOM05D004719 ORTHO05D005519 5.7e-48 195.3 254 48.0
Ca_16667_v3 Cicer arietinum L. HOM05D004719 ORTHO05D005519 7.4e-48 194.9 248 51.2
BolC9t57191H Brassica oleracea HOM05D004719 ORTHO05D005519 1.7e-47 193.7 258 46.5
ECA238G1719 Erigeron canadensis HOM05D000316 ORTHO05D001978 3.7e-47 192.6 229 48.0
PGSC0003DMG400028901 Solanum tuberosum HOM05D004719 ORTHO05D005519 3.7e-47 192.6 261 47.1
Phvul.009G136700 Phaseolus vulgaris HOM05D004719 ORTHO05D005519 6.3e-47 191.8 251 46.2
A10p10840 Brassica napus HOM05D004719 ORTHO05D005519 8.2e-47 191.4 256 46.1
Peaxi162Scf00618g00530 Petunia axillaris HOM05D004719 ORTHO05D005519 8.2e-47 191.4 177 57.1
BraA10t43168Z Brassica rapa HOM05D004719 ORTHO05D005519 1.4e-46 190.7 259 45.2
BcaC01g06246 Brassica carinata HOM05D004719 ORTHO05D005519 1.8e-46 190.3 232 50.9
HPP92_008641 Vanilla planifolia HOM05D004719 ORTHO05D005519 1.8e-46 190.3 270 43.7
ATR0661G055 Amborella trichopoda HOM05D004719 ORTHO05D005519 7.0e-46 188.3 257 46.3
CAN.G204.6 Capsicum annuum HOM05D004719 ORTHO05D005519 1.2e-45 187.6 176 55.7
CDE08G1019 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 1.3e-44 184.1 256 45.3
VMungo1309G2489 Vigna mungo HOM05D004719 ORTHO05D005519 8.5e-44 181.4 211 47.4
Actinidia34185 Actinidia chinensis HOM05D004719 ORTHO05D005519 4.7e-42 175.6 171 53.2
BcaNung07347 Brassica carinata HOM05D004719 ORTHO05D005519 8.0e-42 174.9 189 50.3
TPR.G33870 Trifolium pratense HOM05D004719 ORTHO05D005519 8.0e-42 174.9 236 50.8
Os06g0160400 Oryza sativa ssp. japonica HOM05D004719 ORTHO05D005519 8.8e-41 171.4 273 39.2
FAN06G1194 Fragaria x ananassa HOM05D004719 ORTHO05D005519 4.4e-40 169.1 142 59.9
GSVIVG01028725001 Vitis vinifera HOM05D004719 ORTHO05D005519 9.7e-40 167.9 168 54.2
Zm00001eb376120 Zea mays HOM05D004719 ORTHO05D005519 9.7e-40 167.9 275 41.5
PGR142G4196 Punica granatum HOM05D004719 ORTHO05D005519 1.3e-39 167.5 136 61.8
CDE02G1124 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 3.1e-38 162.9 253 43.5
VMungo0647G2259 Vigna mungo HOM05D004719 ORTHO05D005519 1.0e-36 157.9 114 66.7
Mapoly0050s0076 Marchantia polymorpha HOM05D004719 ORTHO05D005519 1.4e-30 137.5 245 38.4
AagrBONN_evm.TU.Sc2ySwM_340.345 Anthoceros agrestis HOM05D004719 ORTHO05D005519 1.9e-27 127.1 253 36.8
SEGI_18632 Sequoiadendron giganteum HOM05D004719 ORTHO05D005519 1.4e-22 110.9 90 58.9
Pp3c1_11420 Physcomitrium patens HOM05D004719 ORTHO05D005519 7.0e-22 108.6 251 32.7
Dinv28349 Davidia involucrata HOM05D004719 ORTHO05D005519 1.3e-20 104.4 97 56.7
BcaC01g06237 Brassica carinata HOM05D001465 ORTHO05D001434 3.8e-20 102.8 183 43.2
C03p17810 Brassica napus HOM05D004719 ORTHO05D005519 6.6e-20 102.1 137 45.3
FAN18G3526 Fragaria x ananassa HOM05D006854 ORTHO05D210570 2.3e-17 93.6 87 54.0
QL04p064474 Quercus lobata HOM05D000013 ORTHO05D000011 3.4e-16 89.7 81 56.8
FvH4_7g16570 Fragaria vesca HOM05D004719 ORTHO05D005519 8.3e-15 85.1 81 54.3
FAN01G1848 Fragaria x ananassa HOM05D002077 ORTHO05D000818 2.4e-14 83.6 79 55.7
FvH4_6g34200 Fragaria vesca HOM05D004719 ORTHO05D005519 1.1e-11 74.7 44 72.7
BolC3t14188H Brassica oleracea HOM05D004719 ORTHO05D005519 1.2e-10 71.2 110 41.8
FAN16G3662 Fragaria x ananassa HOM05D004719 ORTHO05D005519 1.6e-10 70.9 50 68.0
Solyc06g036500.1 Solanum lycopersicum HOM05D004719 ORTHO05D005519 3.1e-09 66.6 137 34.3
CBR_g83324 Chara braunii HOM05D004719 ORTHO05D005519 1.2e-08 64.7 72 44.4
FAN06G3132 Fragaria x ananassa HOM05D004719 ORTHO05D005519 1.5e-08 64.3 77 48.1
Sopen06g012490 Solanum pennellii HOM05D004719 ORTHO05D005519 1.1e-06 58.2 55 50.9
Hund30245 Selenicereus undatus HOM05D004719 ORTHO05D005519 1.9e-06 57.4 100 44.0
FAN25G3581 Fragaria x ananassa HOM05D017504 ORTHO05D022678 7.0e-06 55.5 30 80.0


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