Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG00G005210 Citrullus lanatus HOM05D006296 ORTHO05D007777 3.9e-72 274.6 132 100.0
ClCG01G022900 Citrullus lanatus HOM05D006296 ORTHO05D007777 3.9e-72 274.6 132 100.0
CsaV3_6G050070 Cucumis sativus L. HOM05D006296 ORTHO05D007777 3.3e-47 191.8 95 95.8
MELO3C007289.2 Cucumis melo HOM05D006296 ORTHO05D007777 1.3e-46 189.9 95 94.7
Sed0007841 Sechium edule HOM05D006296 ORTHO05D007777 4.9e-43 177.9 95 88.4
Sed0020533 Sechium edule HOM05D006296 ORTHO05D007777 7.2e-34 147.5 97 69.1
QL05p039836 Quercus lobata HOM05D006296 ORTHO05D007777 1.5e-31 139.8 94 69.1
FvH4_5g20990 Fragaria vesca HOM05D006296 ORTHO05D007777 1.7e-30 136.3 99 67.7
FAN18G2724 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.7e-30 136.3 99 67.7
Dinv07546 Davidia involucrata HOM05D006296 ORTHO05D007777 3.7e-30 135.2 99 68.7
FAN08G1739 Fragaria x ananassa HOM05D006296 ORTHO05D007777 8.2e-30 134.0 97 68.0
Actinidia07582 Actinidia chinensis HOM05D006296 ORTHO05D007777 1.1e-29 133.7 101 64.4
Lj6g0008813 Lotus japonicus HOM05D006296 ORTHO05D007777 1.4e-29 133.3 95 68.4
FAN21G3093 Fragaria x ananassa HOM05D006296 ORTHO05D007777 9.1e-29 130.6 95 68.4
RcHm_v2.0_Chr5g0008131 Rosa chinensis HOM05D006296 ORTHO05D007777 9.1e-29 130.6 95 68.4
FvH4_3g09420 Fragaria vesca HOM05D006296 ORTHO05D007777 1.5e-28 129.8 95 67.4
MD10G1295500 Malus domestica HOM05D006296 ORTHO05D007777 1.5e-28 129.8 95 69.5
TPR.G12044 Trifolium pratense HOM05D006296 ORTHO05D007777 2.6e-28 129.0 95 64.2
Manes.16G026200 Manihot esculenta HOM05D006296 ORTHO05D007777 3.4e-28 128.6 99 61.6
TWI38G1090 Tripterygium wilfordii HOM05D006296 ORTHO05D007777 4.5e-28 128.3 100 61.0
Phvul.006G187000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 5.9e-28 127.9 95 66.3
MD05G1314200 Malus domestica HOM05D006296 ORTHO05D007777 1.3e-27 126.7 95 68.4
Nn1g04048 Nelumbo nucifera HOM05D006296 ORTHO05D007777 1.3e-27 126.7 95 64.2
Psat7g112640 Pisum sativum HOM05D006296 ORTHO05D007777 1.3e-27 126.7 95 62.1
Aqoxy1G02520 Aquilegia oxysepala HOM05D006296 ORTHO05D007777 1.7e-27 126.3 95 61.1
HanXRQChr01g0003901 Helianthus annuus HOM05D006296 ORTHO05D007777 2.2e-27 125.9 95 63.2
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla HOM05D006296 ORTHO05D007777 2.2e-27 125.9 100 60.0
VMungo0251G3500 Vigna mungo HOM05D006296 ORTHO05D007777 2.2e-27 125.9 95 62.1
AUR62014802 Chenopodium quinoa HOM05D006296 ORTHO05D007777 2.9e-27 125.6 96 64.6
Duzib235G1545 Durio zibethinus HOM05D006296 ORTHO05D007777 6.5e-27 124.4 95 61.1
Lj2A287T56 Lonicera japonica HOM05D006296 ORTHO05D007777 6.5e-27 124.4 100 62.0
THA.LOC104812881 Tarenaya hassleriana HOM05D006296 ORTHO05D007777 6.5e-27 124.4 98 62.2
AUR62016993 Chenopodium quinoa HOM05D006296 ORTHO05D007777 1.1e-26 123.6 96 65.6
Cfa000430 Carpinus fangiana HOM05D006296 ORTHO05D007777 1.4e-26 123.2 96 63.5
Medtr4g088930 Medicago truncatula HOM05D006296 ORTHO05D007777 1.4e-26 123.2 68 75.0
Glyma.07G195600 Glycine max HOM05D006296 ORTHO05D007777 1.9e-26 122.9 95 63.2
Nitab4.5_0003942g0060 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.9e-26 122.9 99 62.6
Nitab4.5_0013250g0030 Nicotiana tabacum HOM05D006296 ORTHO05D007777 2.5e-26 122.5 98 62.2
Thecc.06G189800 Theobroma cacao HOM05D006296 ORTHO05D007777 2.5e-26 122.5 95 60.0
Cc02_g13190 Coffea canephora HOM05D006296 ORTHO05D007777 4.2e-26 121.7 104 57.7
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 4.2e-26 121.7 91 60.4
Glyma.13G180700 Glycine max HOM05D006296 ORTHO05D007777 4.2e-26 121.7 66 77.3
Lalb_Chr16g0383701 Lupinus albus HOM05D006296 ORTHO05D007777 4.2e-26 121.7 68 73.5
VMungo0540G1954 Vigna mungo HOM05D006296 ORTHO05D007777 4.2e-26 121.7 108 57.4
CSS0006104 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 5.5e-26 121.3 66 75.8
Duzib160G0870 Durio zibethinus HOM05D006296 ORTHO05D007777 5.5e-26 121.3 95 60.0
FAN11G0154 Fragaria x ananassa HOM05D006296 ORTHO05D007777 5.5e-26 121.3 103 62.1
CiPaw.10G047400 Carya illinoinensis HOM05D006296 ORTHO05D007777 7.2e-26 120.9 66 75.8
PSO541G0808 Papaver somniferum HOM05D006296 ORTHO05D007777 9.4e-26 120.6 97 61.9
CANSAT35G0041 Cannabis sativa HOM05D006296 ORTHO05D007777 1.2e-25 120.2 91 67.0
Sabra04G0025800 Salix brachista HOM05D006296 ORTHO05D007777 1.6e-25 119.8 99 57.6
CDE04G3708 Ceratophyllum demersum HOM05D006296 ORTHO05D007777 2.1e-25 119.4 100 60.0
Os04g0680300 Oryza sativa ssp. japonica HOM05D006296 ORTHO05D007777 3.6e-25 118.6 95 57.9
Hund21232 Selenicereus undatus HOM05D006296 ORTHO05D007777 3.6e-25 118.6 92 58.7
EL10Ac8g20365 Beta vulgaris HOM05D006296 ORTHO05D007777 6.1e-25 117.9 95 55.8
Lsat_1_v5_gn_1_126121 Lactuca sativa HOM05D006296 ORTHO05D007777 6.1e-25 117.9 95 61.1
Ca_18536_v3 Cicer arietinum L. HOM05D006296 ORTHO05D007777 7.9e-25 117.5 61 77.0
PSO675G2929 Papaver somniferum HOM05D006296 ORTHO05D007777 1.4e-24 116.7 95 61.1
ATR0680G190 Amborella trichopoda HOM05D006296 ORTHO05D007777 2.3e-24 115.9 93 60.2
DCAR_018474 Daucus carota HOM05D006296 ORTHO05D007777 2.3e-24 115.9 89 60.7
Peaxi162Scf00530g00219 Petunia axillaris HOM05D006296 ORTHO05D007777 2.3e-24 115.9 97 58.8
ECA247G1807 Erigeron canadensis HOM05D006296 ORTHO05D007777 3.0e-24 115.5 101 57.4
HPP92_014805 Vanilla planifolia HOM05D006296 ORTHO05D007777 3.0e-24 115.5 99 56.6
Gohir.D06G131300 Gossypium hirsutum HOM05D006296 ORTHO05D007777 3.9e-24 115.2 96 57.3
Gorai.010G153200 Gossypium raimondii HOM05D006296 ORTHO05D007777 3.9e-24 115.2 96 57.3
Oeu005074.1 Olea europaea HOM05D006296 ORTHO05D007777 6.7e-24 114.4 101 59.4
Sc05g0007770 Simmondsia chinensis HOM05D006296 ORTHO05D007777 6.7e-24 114.4 92 57.6
BcaC09g51212 Brassica carinata HOM05D006296 ORTHO05D007777 8.8e-24 114.0 100 56.0
BcaNung00841 Brassica carinata HOM05D006296 ORTHO05D007777 8.8e-24 114.0 102 54.9
A01p13040 Brassica napus HOM05D006296 ORTHO05D007777 8.8e-24 114.0 100 56.0
C01p15710 Brassica napus HOM05D006296 ORTHO05D007777 8.8e-24 114.0 100 56.0
BolC1t01524H Brassica oleracea HOM05D006296 ORTHO05D007777 8.8e-24 114.0 100 56.0
BraA01t01246Z Brassica rapa HOM05D006296 ORTHO05D007777 8.8e-24 114.0 100 56.0
Gohir.A06G126500 Gossypium hirsutum HOM05D006296 ORTHO05D007777 8.8e-24 114.0 96 56.2
CiPaw.09G058300 Carya illinoinensis HOM05D006296 ORTHO05D007777 1.1e-23 113.6 95 58.9
Prupe.4G044900 Prunus persica HOM05D006296 ORTHO05D007777 1.1e-23 113.6 98 61.2
Eucgr.D00634 Eucalyptus grandis HOM05D006296 ORTHO05D007777 1.5e-23 113.2 98 56.1
Potri.004G041700 Populus trichocarpa HOM05D006296 ORTHO05D007777 1.5e-23 113.2 98 55.1
MSTRG.15892 Avicennia marina HOM05D006296 ORTHO05D007777 2.0e-23 112.8 105 55.2
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea HOM05D006296 ORTHO05D007777 2.6e-23 112.5 95 55.8
Aa31LG6G3700 Aethionema arabicum HOM05D006296 ORTHO05D007777 4.4e-23 111.7 93 57.0
Carub.0007s1968 Capsella rubella HOM05D006296 ORTHO05D007777 5.7e-23 111.3 99 54.5
Migut.M01153 Erythranthe guttata HOM05D006296 ORTHO05D007777 5.7e-23 111.3 101 54.5
BcaNung00839 Brassica carinata HOM05D006296 ORTHO05D007777 7.4e-23 110.9 103 53.4
Sp7g19880 Schrenkiella parvula HOM05D006296 ORTHO05D007777 7.4e-23 110.9 101 55.4
Solyc10g009040.4 Solanum lycopersicum HOM05D006296 ORTHO05D007777 7.4e-23 110.9 98 57.1
Sopen10g004820 Solanum pennellii HOM05D006296 ORTHO05D007777 7.4e-23 110.9 98 57.1
BcaC06g30674 Brassica carinata HOM05D006296 ORTHO05D007777 1.7e-22 109.8 100 54.0
A03p52890 Brassica napus HOM05D006296 ORTHO05D007777 1.7e-22 109.8 100 54.0
BraA03t14365Z Brassica rapa HOM05D006296 ORTHO05D007777 1.7e-22 109.8 100 54.0
GSVIVG01002932001 Vitis vinifera HOM05D006296 ORTHO05D007777 1.7e-22 109.8 73 65.8
Nitab4.5_0005954g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 2.2e-22 109.4 70 65.7
Nitab4.5_0002158g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 2.8e-22 109.0 66 71.2
SEGI_22799 Sequoiadendron giganteum HOM05D006296 ORTHO05D007777 4.8e-22 108.2 95 56.8
CARHR228450 Cardamine hirsuta HOM05D006296 ORTHO05D007777 6.3e-22 107.8 93 53.8
Rhsim13G0176800 Rhododendron simsii HOM05D006296 ORTHO05D007777 6.3e-22 107.8 70 67.1
SGA_v2.0_scaffold49G18290 Striga asiatica HOM05D006296 ORTHO05D007777 6.3e-22 107.8 101 57.4
Sabra11G0035100 Salix brachista HOM05D006296 ORTHO05D007777 8.2e-22 107.5 105 54.3
CAN.G1164.13 Capsicum annuum HOM05D006296 ORTHO05D007777 1.8e-21 106.3 76 61.8
Atru.chr10.1908 Acer truncatum HOM05D006296 ORTHO05D007777 3.1e-21 105.5 99 59.6
AL7G32220 Arabidopsis lyrata HOM05D006296 ORTHO05D007777 5.3e-21 104.8 97 54.6
BcaNung02241 Brassica carinata HOM05D006296 ORTHO05D007777 6.9e-21 104.4 88 54.5
Thhalv10026538m.g Eutrema salsugineum HOM05D006296 ORTHO05D007777 6.9e-21 104.4 92 56.5
AT4G21720 Arabidopsis thaliana HOM05D006296 ORTHO05D007777 2.0e-20 102.8 97 53.6
Zm00001eb065930 Zea mays HOM05D006296 ORTHO05D007777 4.5e-20 101.7 97 53.6
Solyc02g078430.3 Solanum lycopersicum HOM05D006296 ORTHO05D007777 1.0e-19 100.5 65 64.6
Sopen02g023280 Solanum pennellii HOM05D006296 ORTHO05D007777 1.7e-19 99.8 65 64.6
unitig_22.g6746 Utricularia gibba HOM05D006296 ORTHO05D007777 2.2e-19 99.4 94 52.1
Phvul.002G228000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 1.4e-18 96.7 96 53.1
SalBow7G3743 Salvia bowleyana HOM05D006296 ORTHO05D007777 1.6e-17 93.2 123 44.7
PGSC0003DMG400022442 Solanum tuberosum HOM05D006296 ORTHO05D007777 2.7e-17 92.4 70 58.6
Migut.H01493 Erythranthe guttata HOM05D006296 ORTHO05D007777 1.0e-16 90.5 75 54.7
Nn1g06589 Nelumbo nucifera HOM05D006296 ORTHO05D007777 3.9e-16 88.6 47 78.7
PGR004G1731 Punica granatum HOM05D006296 ORTHO05D007777 2.6e-15 85.9 95 49.5
Peaxi162Scf00736g00313 Petunia axillaris HOM05D006296 ORTHO05D007777 1.8e-13 79.7 83 51.8
Haze_06487 Corylus avellana HOM05D006296 ORTHO05D007777 4.5e-12 75.1 71 50.7
Actinidia25618 Actinidia chinensis HOM05D006296 ORTHO05D007777 8.5e-11 70.9 51 64.7
Ciclev10017521m.g Citrus clementina HOM05D006296 ORTHO05D007777 1.2e-09 67.0 34 82.4
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea HOM05D006296 ORTHO05D007777 2.3e-08 62.8 34 73.5
Cpa.g.sc27.57 Carica papaya HOM05D006296 ORTHO05D007777 2.3e-08 62.8 64 50.0
CSS0025334 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 1.5e-07 60.1 32 68.8
MBI18_g17001_MAGBIO Magnolia biondii HOM05D006296 ORTHO05D007777 3.3e-07 58.9 61 44.3
PGSC0003DMG400022813 Solanum tuberosum HOM05D006296 ORTHO05D007777 4.4e-07 58.5 68 48.5
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis HOM05D006296 ORTHO05D007777 5.7e-07 58.2 56 50.0
arahy.Tifrunner.gnm1.ann1.W44VBU Arachis hypogaea HOM05D043198 ORTHO05D007777 5.7e-07 58.2 63 50.8
C07p51340 Brassica napus HOM05D006296 ORTHO05D007777 2.8e-06 55.8 63 46.0


User provided reference genes

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