Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10033771m.g Citrus clementina HOM05D005759 ORTHO05D007172 3.7e-85 318.2 158 100.0
Atru.chr12.960 Acer truncatum HOM05D005759 ORTHO05D007172 2.2e-58 229.2 158 71.5
Prupe.2G090100 Prunus persica HOM05D005759 ORTHO05D007172 2.2e-42 176.0 148 61.5
Cfa011218 Carpinus fangiana HOM05D005759 ORTHO05D007172 5.0e-42 174.9 156 54.5
CiPaw.13G035800 Carya illinoinensis HOM05D005759 ORTHO05D007172 1.9e-41 172.9 157 55.4
Gohir.D10G206700 Gossypium hirsutum HOM05D005759 ORTHO05D007172 3.2e-41 172.2 149 57.0
Haze_02624 Corylus avellana HOM05D005759 ORTHO05D007172 4.2e-41 171.8 156 53.8
Gorai.011G232200 Gossypium raimondii HOM05D005759 ORTHO05D007172 7.2e-41 171.0 149 56.4
QL04p040912 Quercus lobata HOM05D005759 ORTHO05D007172 9.5e-41 170.6 148 58.1
Duzib114G0077 Durio zibethinus HOM05D005759 ORTHO05D007172 1.2e-40 170.2 149 55.0
Thecc.10G099000 Theobroma cacao HOM05D005759 ORTHO05D007172 6.1e-40 167.9 151 54.3
Cpa.g.sc720.1 Carica papaya HOM05D005759 ORTHO05D007172 1.2e-38 163.7 156 52.6
TAR623G0127 Trochodendron aralioides HOM05D005759 ORTHO05D007172 1.2e-38 163.7 159 54.7
Manes.07G091866 Manihot esculenta HOM05D005759 ORTHO05D007172 1.5e-38 163.3 157 51.6
Dinv31290 Davidia involucrata HOM05D005759 ORTHO05D007172 1.4e-36 156.8 157 52.9
CSS0040532 Camellia sinensis var. sinensis HOM05D005759 ORTHO05D007172 1.8e-36 156.4 157 52.2
MD02G1244900 Malus domestica HOM05D005759 ORTHO05D007172 5.4e-36 154.8 148 52.7
MD07G1072000 Malus domestica HOM05D005759 ORTHO05D007172 1.2e-35 153.7 148 52.0
Potri.010G234000 Populus trichocarpa HOM05D005759 ORTHO05D007172 1.6e-35 153.3 156 50.6
Sabra10G0181400 Salix brachista HOM05D005759 ORTHO05D007172 2.7e-35 152.5 151 50.3
CSS0028406 Camellia sinensis var. sinensis HOM05D005759 ORTHO05D007172 3.5e-35 152.1 157 51.0
RcHm_v2.0_Chr1g0334181 Rosa chinensis HOM05D005759 ORTHO05D007172 1.0e-34 150.6 138 56.5
Rhsim09G0144200 Rhododendron simsii HOM05D005759 ORTHO05D007172 1.9e-33 146.4 157 49.7
RhsimUnG0061600 Rhododendron simsii HOM05D005759 ORTHO05D007172 1.9e-33 146.4 157 49.7
Actinidia34708 Actinidia chinensis HOM05D005759 ORTHO05D007172 4.3e-33 145.2 157 47.1
vmacro10276 Vaccinium macrocarpon HOM05D005759 ORTHO05D007172 4.7e-32 141.7 158 47.5
Nn2g13981 Nelumbo nucifera HOM05D005759 ORTHO05D007172 4.0e-31 138.7 157 44.6
arahy.Tifrunner.gnm1.ann1.0Q505S Arachis hypogaea HOM05D005759 ORTHO05D007172 1.7e-29 133.3 139 50.4
Glyma.02G165400 Glycine max HOM05D005759 ORTHO05D007172 2.9e-29 132.5 150 49.3
ClCG08G008080 Citrullus lanatus HOM05D005759 ORTHO05D007172 4.9e-29 131.7 148 45.3
MELO3C019880.2 Cucumis melo HOM05D005759 ORTHO05D007172 4.9e-29 131.7 148 45.3
Hma1.2p1_0352F.1_g133040 Hydrangea macrophylla HOM05D005759 ORTHO05D007172 1.8e-28 129.8 148 48.0
COL.COLO4_35597 Corchorus olitorius HOM05D005759 ORTHO05D007172 5.4e-28 128.3 152 43.4
Phvul.007G245100 Phaseolus vulgaris HOM05D005759 ORTHO05D007172 5.9e-27 124.8 138 48.6
Sed0025588 Sechium edule HOM05D005759 ORTHO05D007172 7.8e-27 124.4 156 42.9
Lalb_Chr03g0036351 Lupinus albus HOM05D005759 ORTHO05D007172 1.3e-26 123.6 157 45.9
TPR.G7613 Trifolium pratense HOM05D005759 ORTHO05D007172 6.6e-26 121.3 138 47.8
Medtr1g050730 Medicago truncatula HOM05D005759 ORTHO05D007172 1.5e-25 120.2 152 46.1
Psat6g094520 Pisum sativum HOM05D005759 ORTHO05D007172 7.3e-25 117.9 156 44.2
Lj5g0004167 Lotus japonicus HOM05D005759 ORTHO05D007172 9.5e-25 117.5 139 44.6
VMungo0720G2821 Vigna mungo HOM05D005759 ORTHO05D007172 2.1e-24 116.3 138 46.4
Thhalv10016555m.g Eutrema salsugineum HOM05D005759 ORTHO05D007172 2.8e-24 115.9 147 38.1
arahy.Tifrunner.gnm1.ann1.Y61W31 Arachis hypogaea HOM05D005759 ORTHO05D007172 1.8e-23 113.2 101 51.5
AL4G23090 Arabidopsis lyrata HOM05D005759 ORTHO05D007172 2.3e-23 112.8 144 38.2
AT2G28600 Arabidopsis thaliana HOM05D005759 ORTHO05D007172 4.0e-23 112.1 143 39.2
CARHR121620 Cardamine hirsuta HOM05D005759 ORTHO05D007172 1.2e-22 110.5 146 39.7
Gorai.011G232400 Gossypium raimondii HOM05D005759 ORTHO05D007172 2.6e-22 109.4 84 60.7
PSO063G1818 Papaver somniferum HOM05D005759 ORTHO05D007172 1.3e-21 107.1 158 41.8
Sp4g11420 Schrenkiella parvula HOM05D005759 ORTHO05D007172 2.2e-21 106.3 146 39.0
THA.LOC104826349 Tarenaya hassleriana HOM05D005759 ORTHO05D007172 7.0e-20 101.3 138 39.9
C03p92620 Brassica napus HOM05D005759 ORTHO05D007172 3.9e-18 95.5 132 37.9
Ca_11764_v3 Cicer arietinum L. HOM05D005759 ORTHO05D007172 3.9e-18 95.5 92 48.9
BcaC01g01514 Brassica carinata HOM05D005759 ORTHO05D007172 1.1e-17 94.0 132 37.1
BolC3t21576H Brassica oleracea HOM05D005759 ORTHO05D007172 1.1e-17 94.0 133 36.8
Aqoxy1G00957 Aquilegia oxysepala HOM05D005759 ORTHO05D007172 1.5e-17 93.6 148 39.2
Aa31LG5G7620 Aethionema arabicum HOM05D005759 ORTHO05D007172 1.9e-17 93.2 125 36.8
Actinidia31089 Actinidia chinensis HOM05D005759 ORTHO05D007172 3.3e-17 92.4 120 41.7
CDE04G0943 Ceratophyllum demersum HOM05D005759 ORTHO05D007172 9.5e-17 90.9 155 38.1
A08p00720 Brassica napus HOM05D005759 ORTHO05D007172 1.6e-16 90.1 131 37.4
BraA08t32129Z Brassica rapa HOM05D005759 ORTHO05D007172 1.6e-16 90.1 131 37.4
BcaB04g16965 Brassica carinata HOM05D005759 ORTHO05D007172 4.7e-16 88.6 146 35.6
MBI17_g30596_MAGBIO Magnolia biondii HOM05D005759 ORTHO05D007172 8.1e-16 87.8 133 35.3
Carub.0004s0956 Capsella rubella HOM05D005759 ORTHO05D007172 1.4e-15 87.0 143 34.3
Nn6g35073 Nelumbo nucifera HOM05D005759 ORTHO05D007172 1.8e-15 86.7 153 34.0
Os12g0147500 Oryza sativa ssp. japonica HOM05D005759 ORTHO05D007172 5.4e-12 75.1 147 32.7
Mapoly0120s0020 Marchantia polymorpha HOM05D005759 ORTHO05D007172 6.0e-11 71.6 141 36.2
Zm00001eb164020 Zea mays HOM05D005759 ORTHO05D007172 6.0e-11 71.6 147 31.3
SEGI_18985 Sequoiadendron giganteum HOM05D005759 ORTHO05D007172 1.0e-10 70.9 144 28.5
ATR0820G119 Amborella trichopoda HOM05D005759 ORTHO05D007172 1.3e-10 70.5 154 31.2
Pp3c1_25970 Physcomitrium patens HOM05D005759 ORTHO05D007172 6.8e-07 58.2 108 35.2
PSO339G2548 Papaver somniferum HOM05D005759 ORTHO05D007172 7.6e-06 54.7 108 37.0
PGR031G3543 Punica granatum HOM05D000032 ORTHO05D007444 9.9e-06 54.3 133 26.3


User provided reference genes

Program Settings