Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10033588m.g Citrus clementina HOM05D005820 ORTHO05D007116 2.8e-216 755.0 381 100.0
Atru.chr13.1435 Acer truncatum HOM05D005820 ORTHO05D007116 8.1e-155 550.8 396 71.7
Atru.chr12.1871 Acer truncatum HOM05D005820 ORTHO05D007116 6.4e-152 541.2 396 69.9
Haze_00369 Corylus avellana HOM05D005820 ORTHO05D007116 3.2e-143 512.3 370 68.9
Potri.013G077200 Populus trichocarpa HOM05D005820 ORTHO05D007116 4.2e-143 511.9 400 66.8
Manes.08G160700 Manihot esculenta HOM05D005820 ORTHO05D007116 5.4e-143 511.5 399 67.2
Duzib106G1003 Durio zibethinus HOM05D005820 ORTHO05D007116 8.7e-141 504.2 365 72.6
Sabra13G0066100 Salix brachista HOM05D005820 ORTHO05D007116 2.6e-137 492.7 325 74.2
Thecc.05G222900 Theobroma cacao HOM05D005820 ORTHO05D007116 2.6e-137 492.7 401 67.1
Cfa016076 Carpinus fangiana HOM05D005820 ORTHO05D007116 7.6e-137 491.1 393 63.9
CiPaw.05G212600 Carya illinoinensis HOM05D005820 ORTHO05D007116 1.2e-134 483.8 396 62.9
QL09p020654 Quercus lobata HOM05D005820 ORTHO05D007116 1.3e-133 480.3 399 64.9
Gorai.003G057900 Gossypium raimondii HOM05D005820 ORTHO05D007116 3.0e-133 479.2 401 66.3
Gohir.D03G055100 Gossypium hirsutum HOM05D005820 ORTHO05D007116 2.5e-132 476.1 401 65.8
TAR633G0012 Trochodendron aralioides HOM05D005820 ORTHO05D007116 3.4e-129 465.7 398 60.6
COL.COLO4_15131 Corchorus olitorius HOM05D005820 ORTHO05D007116 4.9e-128 461.8 396 63.9
TWI53G1480 Tripterygium wilfordii HOM05D005820 ORTHO05D007116 8.4e-128 461.1 407 60.9
Gohir.A02G125300 Gossypium hirsutum HOM05D005820 ORTHO05D007116 1.3e-120 437.2 269 81.4
CSS0036845 Camellia sinensis var. sinensis HOM05D005820 ORTHO05D007116 7.2e-119 431.4 399 59.9
Nn3g21157 Nelumbo nucifera HOM05D005820 ORTHO05D007116 9.4e-119 431.0 347 62.0
Sp6g27470 Schrenkiella parvula HOM05D005820 ORTHO05D007116 2.1e-118 429.9 404 54.2
Thhalv10012783m.g Eutrema salsugineum HOM05D005820 ORTHO05D007116 2.7e-118 429.5 404 54.7
COL.COLO4_22345 Corchorus olitorius HOM05D005820 ORTHO05D007116 6.1e-118 428.3 359 64.3
ClCG01G004810 Citrullus lanatus HOM05D005820 ORTHO05D007116 1.4e-117 427.2 348 63.5
Actinidia08766 Actinidia chinensis HOM05D005820 ORTHO05D007116 8.8e-117 424.5 401 57.9
C09p60450 Brassica napus HOM05D005820 ORTHO05D007116 1.7e-115 420.2 403 53.6
BolC9t58877H Brassica oleracea HOM05D005820 ORTHO05D007116 2.8e-115 419.5 403 53.6
vmacro06371 Vaccinium macrocarpon HOM05D005820 ORTHO05D007116 2.8e-115 419.5 388 59.0
Prupe.2G329300 Prunus persica HOM05D005820 ORTHO05D007116 6.3e-115 418.3 348 62.6
Sc13g0011020 Simmondsia chinensis HOM05D005820 ORTHO05D007116 8.2e-115 417.9 347 61.7
MD07G1032700 Malus domestica HOM05D005820 ORTHO05D007116 1.4e-114 417.2 349 63.0
THA.LOC104821161 Tarenaya hassleriana HOM05D005820 ORTHO05D007116 9.1e-114 414.5 406 53.2
AT5G16690 Arabidopsis thaliana HOM05D005820 ORTHO05D007116 1.2e-113 414.1 406 53.7
TAR365G1018 Trochodendron aralioides HOM05D005820 ORTHO05D007116 2.6e-113 412.9 395 55.7
CsaV3_5G005010 Cucumis sativus L. HOM05D005820 ORTHO05D007116 3.4e-113 412.5 348 62.4
MELO3C005455.2 Cucumis melo HOM05D005820 ORTHO05D007116 4.5e-113 412.1 348 61.8
TAR365G1123 Trochodendron aralioides HOM05D005820 ORTHO05D007116 4.5e-113 412.1 393 55.2
Glyma.12G014600 Glycine max HOM05D005820 ORTHO05D007116 1.0e-112 411.0 348 58.6
CARHR196510 Cardamine hirsuta HOM05D005820 ORTHO05D007116 1.3e-112 410.6 405 53.6
A10p22530 Brassica napus HOM05D005820 ORTHO05D007116 1.7e-112 410.2 403 52.6
RcHm_v2.0_Chr1g0384611 Rosa chinensis HOM05D005820 ORTHO05D007116 2.9e-112 409.5 348 60.6
BraA10t44315Z Brassica rapa HOM05D005820 ORTHO05D007116 5.0e-112 408.7 403 52.6
FvH4_7g34260 Fragaria vesca HOM05D005820 ORTHO05D007116 6.5e-112 408.3 348 62.6
AL6G27690 Arabidopsis lyrata HOM05D005820 ORTHO05D007116 1.9e-111 406.8 405 53.1
Phvul.011G017500 Phaseolus vulgaris HOM05D005820 ORTHO05D007116 1.9e-111 406.8 348 57.8
VMungo1127G1342 Vigna mungo HOM05D005820 ORTHO05D007116 4.2e-111 405.6 355 58.0
Lalb_Chr01g0000781 Lupinus albus HOM05D005820 ORTHO05D007116 5.5e-111 405.2 349 57.3
Aa31LG11G12940 Aethionema arabicum HOM05D005820 ORTHO05D007116 7.2e-111 404.8 431 50.8
Hma1.2p1_0419F.1_g149510 Hydrangea macrophylla HOM05D005820 ORTHO05D007116 9.4e-111 404.4 325 64.9
FAN01G2368 Fragaria x ananassa HOM05D005820 ORTHO05D007116 1.2e-110 404.1 348 61.8
Carub.0006s1489 Capsella rubella HOM05D005820 ORTHO05D007116 1.6e-110 403.7 405 53.1
DCAR_020431 Daucus carota HOM05D005820 ORTHO05D007116 1.6e-110 403.7 331 61.6
Sed0005542 Sechium edule HOM05D005820 ORTHO05D007116 3.6e-110 402.5 403 54.1
BcaB08g36827 Brassica carinata HOM05D005820 ORTHO05D007116 4.7e-110 402.1 423 50.8
PSO384G2364 Papaver somniferum HOM05D005820 ORTHO05D007116 6.1e-110 401.7 339 61.4
FAN03G2216 Fragaria x ananassa HOM05D005820 ORTHO05D007116 2.3e-109 399.8 352 60.8
Aqoxy2G01900 Aquilegia oxysepala HOM05D005820 ORTHO05D007116 3.9e-109 399.1 350 58.9
Lj3g0016493 Lotus japonicus HOM05D005820 ORTHO05D007116 3.9e-109 399.1 391 53.2
PSO339G0775 Papaver somniferum HOM05D005820 ORTHO05D007116 1.5e-108 397.1 339 61.4
FAN10G1332 Fragaria x ananassa HOM05D005820 ORTHO05D007116 2.0e-108 396.7 348 60.9
PSO210G4891 Papaver somniferum HOM05D005820 ORTHO05D007116 3.3e-108 396.0 387 56.3
CANSAT54G2180 Cannabis sativa HOM05D005820 ORTHO05D007116 7.4e-108 394.8 345 60.9
Psat5g135040 Pisum sativum HOM05D005820 ORTHO05D007116 3.7e-107 392.5 391 51.4
Ca_03104_v3 Cicer arietinum L. HOM05D005820 ORTHO05D007116 8.2e-107 391.3 347 56.5
arahy.Tifrunner.gnm1.ann1.9S7XN2 Arachis hypogaea HOM05D005820 ORTHO05D007116 1.1e-106 391.0 350 56.9
Medtr5g082610 Medicago truncatula HOM05D005820 ORTHO05D007116 1.1e-106 391.0 347 56.2
PGR042G2204 Punica granatum HOM05D005820 ORTHO05D007116 1.4e-106 390.6 346 59.8
PSO170G6050 Papaver somniferum HOM05D005820 ORTHO05D007116 2.9e-104 382.9 388 54.9
HanXRQChr15g0492741 Helianthus annuus HOM05D005820 ORTHO05D007116 2.1e-102 376.7 330 59.1
MSTRG.19155 Avicennia marina HOM05D005820 ORTHO05D007116 2.3e-101 373.2 398 50.3
ECA232G1869 Erigeron canadensis HOM05D005820 ORTHO05D007116 2.2e-99 366.7 348 56.9
Rhsim03G0224500 Rhododendron simsii HOM05D005820 ORTHO05D007116 2.8e-99 366.3 278 65.5
Sopen12g007200 Solanum pennellii HOM05D005820 ORTHO05D007116 4.8e-99 365.5 391 51.4
Migut.J00550 Erythranthe guttata HOM05D005820 ORTHO05D007116 1.1e-98 364.4 402 49.5
Solyc12g013880.2 Solanum lycopersicum HOM05D005820 ORTHO05D007116 1.8e-98 363.6 390 50.8
EL10Ac4g08387 Beta vulgaris HOM05D005820 ORTHO05D007116 1.6e-97 360.5 366 54.6
Peaxi162Scf00046g02624 Petunia axillaris HOM05D005820 ORTHO05D007116 2.0e-97 360.1 394 51.8
EL10Ac2g03131 Beta vulgaris HOM05D005820 ORTHO05D007116 2.6e-97 359.8 366 54.6
ECA233G1554 Erigeron canadensis HOM05D005820 ORTHO05D007116 5.9e-97 358.6 327 57.8
Nitab4.5_0010710g0030 Nicotiana tabacum HOM05D005820 ORTHO05D007116 5.9e-97 358.6 393 51.4
Nitab4.5_0012358g0010 Nicotiana tabacum HOM05D005820 ORTHO05D007116 5.9e-97 358.6 393 50.9
Hma1.2p1_0419F.1_g149500 Hydrangea macrophylla HOM05D005820 ORTHO05D007116 1.0e-96 357.8 255 70.2
CAN.G103.20 Capsicum annuum HOM05D005820 ORTHO05D007116 1.7e-96 357.1 391 51.2
AUR62033087 Chenopodium quinoa HOM05D005820 ORTHO05D007116 3.8e-96 355.9 322 57.5
SGA_v2.0_scaffold75G24867 Striga asiatica HOM05D005820 ORTHO05D007116 6.5e-96 355.1 378 51.1
PGSC0003DMG402015362 Solanum tuberosum HOM05D005820 ORTHO05D007116 1.1e-95 354.4 330 55.5
Lsat_1_v5_gn_9_46201 Lactuca sativa HOM05D005820 ORTHO05D007116 1.6e-94 350.5 349 54.7
Cc10_g10830 Coffea canephora HOM05D005820 ORTHO05D007116 2.1e-94 350.1 332 55.4
ATR0829G080 Amborella trichopoda HOM05D005820 ORTHO05D007116 6.8e-93 345.1 347 51.3
SalBow3G3950 Salvia bowleyana HOM05D005820 ORTHO05D007116 3.4e-92 342.8 384 47.1
CDE02G0417 Ceratophyllum demersum HOM05D005820 ORTHO05D007116 1.8e-90 337.0 324 50.6
Zm00001eb031810 Zea mays HOM05D005820 ORTHO05D007116 1.2e-89 334.3 389 46.0
TPR.G19809 Trifolium pratense HOM05D005820 ORTHO05D007116 2.7e-89 333.2 297 55.2
Os10g0402200 Oryza sativa ssp. japonica HOM05D005820 ORTHO05D007116 8.5e-88 328.2 353 47.0
Eucgr.A02992 Eucalyptus grandis HOM05D005820 ORTHO05D007116 4.2e-87 325.9 356 51.4
HPP92_000954 Vanilla planifolia HOM05D005820 ORTHO05D007116 6.1e-86 322.0 331 49.8
Cpa.g.sc43.140 Carica papaya HOM05D005820 ORTHO05D007116 1.0e-85 321.2 255 65.9
unitig_749.g14271 Utricularia gibba HOM05D005820 ORTHO05D007116 2.4e-82 310.1 366 45.1
Lj3A884T58 Lonicera japonica HOM05D005820 ORTHO05D007116 1.7e-80 303.9 254 63.8
SHI15005 Sapria himalayana HOM05D005820 ORTHO05D007116 3.5e-73 279.6 190 72.6
AUR62042764 Chenopodium quinoa HOM05D005820 ORTHO05D007116 4.6e-65 252.7 190 65.8
MD01G1239300 Malus domestica HOM05D005820 ORTHO05D007116 8.0e-62 241.9 308 47.1
Mapoly0140s0032 Marchantia polymorpha HOM05D005820 ORTHO05D007116 6.0e-49 199.1 351 35.9
Pp3c16_7630 Physcomitrium patens HOM05D005820 ORTHO05D007116 1.1e-47 194.9 363 35.8
AagrBONN_evm.TU.Sc2ySwM_368.2608 Anthoceros agrestis HOM05D005820 ORTHO05D007116 1.5e-47 194.5 297 34.7
SMO203G0218 Selaginella moellendorffii HOM05D005820 ORTHO05D007116 2.6e-36 157.1 268 33.6
CBR_g52284 Chara braunii HOM05D005820 ORTHO05D007116 4.3e-31 139.8 284 28.9
Cpa.g.sc43.143 Carica papaya HOM05D005820 ORTHO05D007116 1.8e-29 134.4 193 43.5
AUR62022348 Chenopodium quinoa HOM05D005820 ORTHO05D007116 5.3e-29 132.9 97 69.1
arahy.Tifrunner.gnm1.ann1.CH4JFK Arachis hypogaea HOM05D005820 ORTHO05D007116 1.2e-28 131.7 242 38.8
Oeu001352.2 Olea europaea HOM05D005820 ORTHO05D007116 3.2e-26 123.6 145 49.7
Lj3A884T57 Lonicera japonica HOM05D005820 ORTHO05D007116 2.7e-25 120.6 133 51.1
arahy.Tifrunner.gnm1.ann1.9KL91U Arachis hypogaea HOM05D005820 ORTHO05D007116 2.3e-24 117.5 188 39.4
CAN.G557.3 Capsicum annuum HOM05D005820 ORTHO05D007116 1.7e-19 101.3 137 46.0
SHI15006 Sapria himalayana HOM05D005820 ORTHO05D007116 2.5e-18 97.4 177 36.2
SEGI_39455 Sequoiadendron giganteum HOM05D005820 ORTHO05D007116 1.8e-13 81.3 80 52.5
CAN.G1793.2 Capsicum annuum HOM05D005820 ORTHO05D007116 5.8e-12 76.3 49 69.4
Rhsim03G0224400 Rhododendron simsii HOM05D005820 ORTHO05D007116 4.6e-09 66.6 109 43.1


User provided reference genes

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