Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10010880m.g Citrus clementina HOM05D001200 ORTHO05D002731 7.7e-55 216.9 106 100.0
Ciclev10013975m.g Citrus clementina HOM05D001200 ORTHO05D002731 7.7e-55 216.9 106 100.0
Ciclev10027651m.g Citrus clementina HOM05D001200 ORTHO05D002731 7.7e-55 216.9 106 100.0
Ciclev10030458m.g Citrus clementina HOM05D001200 ORTHO05D002731 7.7e-55 216.9 106 100.0
Ciclev10013970m.g Citrus clementina HOM05D001200 ORTHO05D002731 1.1e-53 213.0 104 100.0
EL10As15g24100 Beta vulgaris HOM05D001200 ORTHO05D002731 9.4e-53 209.9 106 94.3
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 9.4e-53 209.9 106 94.3
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 1.2e-50 203.0 106 90.6
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 1.2e-50 203.0 106 90.6
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 1.2e-50 203.0 106 90.6
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 1.2e-50 203.0 106 90.6
Lj2P1238T97 Lonicera japonica HOM05D001200 ORTHO05D002731 2.0e-50 202.2 106 91.5
Gohir.1Z049731 Gossypium hirsutum HOM05D001200 ORTHO05D002731 2.6e-50 201.8 106 91.5
Peaxi162Scf00030g02118 Petunia axillaris HOM05D001200 ORTHO05D002731 7.5e-50 200.3 106 90.6
DCAR_032536 Daucus carota HOM05D001200 ORTHO05D002731 1.3e-49 199.5 106 90.6
RcHm_v2.0_Chr5g0043051 Rosa chinensis HOM05D001200 ORTHO05D002731 1.3e-49 199.5 106 91.5
Sed0012006 Sechium edule HOM05D001200 ORTHO05D002731 1.7e-49 199.1 106 88.7
PGSC0003DMG401011339 Solanum tuberosum HOM05D001200 ORTHO05D002731 1.7e-49 199.1 106 89.6
Gohir.A01G143400 Gossypium hirsutum HOM05D001200 ORTHO05D002731 4.8e-49 197.6 106 89.6
Hund08793 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund12716 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund12843 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund23968 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund27631 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund27678 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund27755 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund27831 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund28330 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund28438 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund28448 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund28536 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund28587 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund28596 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund28613 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund28880 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund28937 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund28946 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund28951 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund28954 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund28961 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund28974 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund28979 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund29026 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund29089 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund29109 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund29186 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund29244 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund29247 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund29251 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund29254 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund29261 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund29273 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund29277 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund29281 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund29285 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund29288 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund29316 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund29434 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund29438 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund29453 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund29499 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund29654 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund29713 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund29755 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund29814 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund29818 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund30036 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund30039 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund30120 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund30177 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund30365 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Hund30388 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.3e-49 197.2 107 88.8
Nn064s42212 Nelumbo nucifera HOM05D001200 ORTHO05D002731 8.3e-49 196.8 106 87.7
BcaC03g16699 Brassica carinata HOM05D001200 ORTHO05D002731 1.4e-48 196.1 106 88.7
HanXRQChr17g0557761 Helianthus annuus HOM05D001200 ORTHO05D002731 1.4e-48 196.1 106 88.7
CARHR282420 Cardamine hirsuta HOM05D001200 ORTHO05D002731 3.1e-48 194.9 106 87.7
Medtr7g021720 Medicago truncatula HOM05D001200 ORTHO05D002731 5.4e-48 194.1 106 86.8
C09p24620 Brassica napus HOM05D001200 ORTHO05D002731 7.0e-48 193.7 106 87.7
BolSC35t60694H Brassica oleracea HOM05D001200 ORTHO05D002731 7.0e-48 193.7 106 87.7
BolSC37t60791H Brassica oleracea HOM05D001200 ORTHO05D002731 7.0e-48 193.7 106 87.7
BolSC46t60960H Brassica oleracea HOM05D001200 ORTHO05D002731 7.0e-48 193.7 106 87.7
BolSC47t61066H Brassica oleracea HOM05D001200 ORTHO05D002731 7.0e-48 193.7 106 87.7
BraSC179t45776Z Brassica rapa HOM05D001200 ORTHO05D002731 7.0e-48 193.7 106 87.7
BraSC59t46549Z Brassica rapa HOM05D001200 ORTHO05D002731 7.0e-48 193.7 106 87.7
SalBow1G7634 Salvia bowleyana HOM05D001200 ORTHO05D002731 9.1e-48 193.4 106 84.9
BolSC29t60504H Brassica oleracea HOM05D001200 ORTHO05D002731 3.8e-46 188.0 104 87.5
C09p40370 Brassica napus HOM05D001200 ORTHO05D002731 1.1e-45 186.4 105 85.7
BolC2t08908H Brassica oleracea HOM05D001200 ORTHO05D002731 1.0e-43 179.9 106 83.0
Ciclev10027632m.g Citrus clementina HOM05D001200 ORTHO05D002731 9.8e-42 173.3 97 91.8
Lalb_Chr07g0191761 Lupinus albus HOM05D001200 ORTHO05D002731 6.3e-41 170.6 107 80.4
RcHm_v2.0_Chr5g0017231 Rosa chinensis HOM05D001200 ORTHO05D002731 3.1e-40 168.3 90 91.1
HanXRQChr00c0328g0573611 Helianthus annuus HOM05D001200 ORTHO05D002731 7.0e-40 167.2 91 89.0
Medtr4g050950 Medicago truncatula HOM05D001200 ORTHO05D002731 2.7e-39 165.2 94 86.2
Oeu053979.1 Olea europaea HOM05D001200 ORTHO05D002731 4.5e-39 164.5 92 87.0
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 9.5e-37 156.8 106 75.5
Medtr7g075220 Medicago truncatula HOM05D000504 ORTHO05D002731 1.4e-35 152.9 105 73.3
BraSC59t46528Z Brassica rapa HOM05D001200 ORTHO05D002731 1.2e-34 149.8 85 87.1
TPR.G24771 Trifolium pratense HOM05D001200 ORTHO05D002731 9.8e-34 146.7 90 80.0
BolSC29t60544H Brassica oleracea HOM05D001200 ORTHO05D002731 2.9e-33 145.2 107 67.3
SEGI_13011 Sequoiadendron giganteum HOM05D001200 ORTHO05D002731 1.1e-32 143.3 90 68.9
Solyc11g021215.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 2.4e-32 142.1 90 77.8
Thhalv10017742m.g Eutrema salsugineum HOM05D001200 ORTHO05D002731 9.2e-32 140.2 106 68.9
Gohir.A01G139671 Gossypium hirsutum HOM05D001200 ORTHO05D002731 4.6e-31 137.9 95 76.8
HanXRQChr00c0690g0576761 Helianthus annuus HOM05D001200 ORTHO05D002731 5.9e-31 137.5 106 67.9
HanXRQChr11g0323741 Helianthus annuus HOM05D001200 ORTHO05D002731 5.9e-31 137.5 106 67.9
Gohir.D08G035150 Gossypium hirsutum HOM05D001200 ORTHO05D002731 1.3e-30 136.3 95 72.6
Gorai.004G033100 Gossypium raimondii HOM05D001200 ORTHO05D002731 1.3e-30 136.3 95 72.6
BraSC103t45427Z Brassica rapa HOM05D001200 ORTHO05D002731 1.1e-29 133.3 80 81.2
Lalb_Chr13g0292801 Lupinus albus HOM05D001200 ORTHO05D002731 1.6e-28 129.4 70 85.7
Hund28850 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.2e-28 127.5 66 87.9
Hund29179 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.2e-28 127.5 66 87.9
HanXRQChr08g0211971 Helianthus annuus HOM05D001200 ORTHO05D002731 1.4e-27 126.3 66 87.9
Medtr0002s0170 Medicago truncatula HOM05D001200 ORTHO05D002731 1.4e-27 126.3 105 61.9
Peaxi162Scf01164g00035 Petunia axillaris HOM05D001200 ORTHO05D002731 1.2e-26 123.2 66 86.4
CsaV3_UNG210140 Cucumis sativus L. HOM05D001200 ORTHO05D002731 2.0e-26 122.5 66 84.8
HanXRQChr12g0383551 Helianthus annuus HOM05D001200 ORTHO05D002731 2.2e-25 119.0 66 84.8
SMO086G0020 Selaginella moellendorffii HOM05D001200 ORTHO05D002731 6.4e-25 117.5 107 55.1
Solyc11g044647.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 1.1e-24 116.7 79 75.9
HanXRQChr03g0073091 Helianthus annuus HOM05D001200 ORTHO05D002731 1.4e-24 116.3 66 81.8
Gorai.006G071400 Gossypium raimondii HOM05D001200 ORTHO05D002731 2.4e-24 115.5 64 84.4
MBI10_g47590_MAGBIO Magnolia biondii HOM05D001200 ORTHO05D002731 3.2e-24 115.2 69 73.9
MBI10_g47593_MAGBIO Magnolia biondii HOM05D001200 ORTHO05D002731 3.2e-24 115.2 69 73.9
HanXRQChr00c0703g0576951 Helianthus annuus HOM05D001200 ORTHO05D002731 2.7e-23 112.1 89 68.5
Gohir.D03G063001 Gossypium hirsutum HOM05D001200 ORTHO05D002731 3.5e-23 111.7 79 72.2
Hund30513 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.3e-22 109.0 62 85.5
Migut.D01384 Erythranthe guttata HOM05D001200 ORTHO05D002731 3.9e-22 108.2 106 56.6
GSVIVG01023768001 Vitis vinifera HOM05D001200 ORTHO05D002731 5.0e-22 107.8 90 64.4
Gorai.013G108500 Gossypium raimondii HOM05D001200 ORTHO05D002731 4.3e-21 104.8 76 71.1
SabraPtG0005600 Salix brachista HOM05D000533 ORTHO05D006151 7.3e-21 104.0 61 77.0
DCAR_025284 Daucus carota HOM05D001200 ORTHO05D002731 3.6e-20 101.7 57 84.2
Lsat_1_v5_gn_6_54081 Lactuca sativa HOM05D001200 ORTHO05D002731 2.0e-18 95.9 75 66.7
Lalb_Chr23g0274791 Lupinus albus HOM05D001200 ORTHO05D002731 3.7e-17 91.7 46 91.3
Aa31LG5G21700 Aethionema arabicum HOM05D001200 ORTHO05D002731 4.1e-16 88.2 88 56.8
Lalb_Chr18g0049431 Lupinus albus HOM05D001200 ORTHO05D002731 1.9e-13 79.3 106 43.4
Nitab4.5_0001342g0130 Nicotiana tabacum HOM05D001200 ORTHO05D002731 1.9e-13 79.3 63 60.3
C09p39280 Brassica napus HOM05D001200 ORTHO05D002731 3.6e-12 75.1 40 87.5
CANSAT16G0036 Cannabis sativa HOM05D003666 ORTHO05D004770 1.1e-11 73.6 101 38.6
GSVIVG01016016001 Vitis vinifera HOM05D001200 ORTHO05D049435 1.4e-11 73.2 46 76.1
HanXRQChr00c0289g0573131 Helianthus annuus HOM05D001200 ORTHO05D002731 4.0e-11 71.6 38 89.5
Migut.D01520 Erythranthe guttata HOM05D001200 ORTHO05D002731 2.0e-10 69.3 34 91.2
ATMG00580 Arabidopsis thaliana HOM05D003666 ORTHO05D004770 2.6e-10 68.9 97 37.1
DCAR_032432 Daucus carota HOM05D003666 ORTHO05D004770 2.6e-10 68.9 97 37.1
TPR.G7852 Trifolium pratense HOM05D001200 ORTHO05D002731 5.8e-10 67.8 42 73.8
HanXRQMTg0579201 Helianthus annuus HOM05D003666 ORTHO05D004770 7.6e-10 67.4 93 38.7
Nitab4.5_0010611g0010 Nicotiana tabacum HOM05D001200 ORTHO05D002731 1.3e-09 66.6 64 53.1
arahy.Tifrunner.gnm1.ann1.75QRLF Arachis hypogaea HOM05D003666 ORTHO05D004770 2.9e-09 65.5 93 38.7
arahy.Tifrunner.gnm1.ann1.ZBC6LT Arachis hypogaea HOM05D003666 ORTHO05D004770 2.9e-09 65.5 93 38.7
Gorai.001G166300 Gossypium raimondii HOM05D003666 ORTHO05D004770 2.9e-09 65.5 93 37.6
Medtr0082s0090 Medicago truncatula HOM05D003666 ORTHO05D004770 2.9e-09 65.5 93 38.7
SabraMtG0002200 Salix brachista HOM05D003666 ORTHO05D004770 2.9e-09 65.5 93 37.6
Sed0020058 Sechium edule HOM05D003666 ORTHO05D004770 2.9e-09 65.5 93 37.6
BraSC143t45662Z Brassica rapa HOM05D001200 ORTHO05D002731 6.4e-09 64.3 45 71.1
PSO210G0035 Papaver somniferum HOM05D003666 ORTHO05D004770 6.4e-09 64.3 93 37.6
Aa31csc553G70 Aethionema arabicum HOM05D003666 ORTHO05D004770 1.4e-08 63.2 93 36.6
C04p19570 Brassica napus HOM05D003666 ORTHO05D004770 1.4e-08 63.2 93 36.6
BraSC177t45766Z Brassica rapa HOM05D003666 ORTHO05D004770 1.4e-08 63.2 93 36.6
Lj2A1223T77 Lonicera japonica HOM05D003666 ORTHO05D004770 1.4e-08 63.2 93 36.6
Lj2A1228G70 Lonicera japonica HOM05D003666 ORTHO05D004770 1.4e-08 63.2 93 36.6
LjContig00439g0017912 Lotus japonicus HOM05D003666 ORTHO05D004770 1.4e-08 63.2 93 36.6
LjContig00439g0019818 Lotus japonicus HOM05D003666 ORTHO05D004770 1.4e-08 63.2 93 36.6
BraSC77t46648Z Brassica rapa HOM05D003666 ORTHO05D004770 1.9e-08 62.8 97 37.1
BolC4t23491H Brassica oleracea HOM05D003666 ORTHO05D004770 4.1e-08 61.6 93 36.6
Nitab4.5_0000172g1340 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.2e-07 60.1 93 35.5
SHI36046 Sapria himalayana HOM05D003666 ORTHO05D004770 1.6e-07 59.7 84 36.9
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 2.7e-07 58.9 84 36.9
Gohir.A11G199666 Gossypium hirsutum HOM05D003666 ORTHO05D004770 5.1e-06 54.7 79 36.7
Hund27883 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.6e-06 54.3 25 96.0
Mapoly0092s0003 Marchantia polymorpha HOM05D001200 ORTHO05D002731 8.6e-06 53.9 43 65.1


User provided reference genes

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