Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10029374m.g Citrus clementina HOM05D005995 ORTHO05D007362 1.2e-92 343.2 180 100.0
CiPaw.14G056700 Carya illinoinensis HOM05D005995 ORTHO05D007362 1.6e-73 279.6 178 82.0
QL01p039263 Quercus lobata HOM05D005995 ORTHO05D007362 1.6e-73 279.6 178 82.0
Cpa.g.sc2.418 Carica papaya HOM05D005995 ORTHO05D007362 2.1e-73 279.3 177 81.4
Thecc.09G353200 Theobroma cacao HOM05D005995 ORTHO05D007362 1.1e-72 276.9 178 82.0
Aqoxy4G02443 Aquilegia oxysepala HOM05D005995 ORTHO05D007362 1.5e-71 273.1 178 77.0
TAR131G0002 Trochodendron aralioides HOM05D005995 ORTHO05D007362 3.4e-71 271.9 180 79.4
TAR623G0738 Trochodendron aralioides HOM05D005995 ORTHO05D007362 4.5e-71 271.6 180 79.4
Haze_24375 Corylus avellana HOM05D005995 ORTHO05D007362 5.9e-71 271.2 178 79.2
CSS0037016 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 8.5e-70 267.3 178 78.7
CSS0047754 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 8.5e-70 267.3 178 78.7
Potri.001G279700 Populus trichocarpa HOM05D005995 ORTHO05D007362 1.1e-69 266.9 177 79.1
Duzib170G0863 Durio zibethinus HOM05D005995 ORTHO05D007362 1.9e-69 266.2 177 78.5
Cc01_g14560 Coffea canephora HOM05D005995 ORTHO05D007362 3.2e-69 265.4 178 77.0
Nn2g14523 Nelumbo nucifera HOM05D005995 ORTHO05D007362 3.2e-69 265.4 178 76.4
COL.COLO4_11080 Corchorus olitorius HOM05D005995 ORTHO05D007362 5.5e-69 264.6 178 78.7
Dinv09649 Davidia involucrata HOM05D002227 ORTHO05D002337 5.5e-69 264.6 152 88.2
TAR633G2447 Trochodendron aralioides HOM05D005995 ORTHO05D007362 1.6e-68 263.1 179 76.0
GSVIVG01024692001 Vitis vinifera HOM05D005995 ORTHO05D007362 3.6e-68 261.9 178 78.7
Duzib168G2258 Durio zibethinus HOM05D005995 ORTHO05D007362 4.6e-68 261.5 178 77.5
Potri.009G074400 Populus trichocarpa HOM05D005995 ORTHO05D007362 4.6e-68 261.5 178 75.8
Manes.17G003200 Manihot esculenta HOM05D005995 ORTHO05D007362 7.9e-68 260.8 178 76.4
Cfa011735 Carpinus fangiana HOM05D005995 ORTHO05D007362 1.3e-67 260.0 178 76.4
Glyma.11G168600 Glycine max HOM05D005995 ORTHO05D007362 5.1e-67 258.1 181 75.7
Actinidia23218 Actinidia chinensis HOM05D005995 ORTHO05D007362 6.7e-67 257.7 152 84.9
arahy.Tifrunner.gnm1.ann1.SCP5PP Arachis hypogaea HOM05D005995 ORTHO05D007362 6.7e-67 257.7 183 74.9
Sabra09G0056500 Salix brachista HOM05D005995 ORTHO05D007362 6.7e-67 257.7 178 74.7
CiPaw.13G073700 Carya illinoinensis HOM05D005995 ORTHO05D007362 1.1e-66 256.9 170 76.5
FAN25G2223 Fragaria x ananassa HOM05D005995 ORTHO05D007362 2.5e-66 255.8 179 75.4
Sopen06g033540 Solanum pennellii HOM05D005995 ORTHO05D007362 2.5e-66 255.8 180 76.7
PGSC0003DMG400030447 Solanum tuberosum HOM05D005995 ORTHO05D007362 2.5e-66 255.8 180 76.7
CAN.G1095.10 Capsicum annuum HOM05D005995 ORTHO05D007362 7.4e-66 254.2 180 76.1
Phvul.006G070800 Phaseolus vulgaris HOM05D005995 ORTHO05D007362 7.4e-66 254.2 179 74.3
FAN21G0787 Fragaria x ananassa HOM05D005995 ORTHO05D007362 1.3e-65 253.4 179 73.7
EL10Ac3g05994 Beta vulgaris HOM05D005995 ORTHO05D007362 2.8e-65 252.3 179 72.6
Solyc06g082160.4 Solanum lycopersicum HOM05D005995 ORTHO05D007362 2.8e-65 252.3 180 75.6
Nitab4.5_0013485g0010 Nicotiana tabacum HOM05D005995 ORTHO05D007362 4.8e-65 251.5 180 76.7
VMungo0540G0986 Vigna mungo HOM05D005995 ORTHO05D007362 4.8e-65 251.5 179 74.3
AUR62023851 Chenopodium quinoa HOM05D005995 ORTHO05D007362 1.1e-64 250.4 179 73.2
Hund06617 Selenicereus undatus HOM05D005995 ORTHO05D007362 1.1e-64 250.4 174 76.4
FAN16G3099 Fragaria x ananassa HOM05D005995 ORTHO05D007362 2.4e-64 249.2 179 73.2
Rhsim13G0066700 Rhododendron simsii HOM05D005995 ORTHO05D007362 2.4e-64 249.2 165 78.2
Sed0015986 Sechium edule HOM05D005995 ORTHO05D007362 6.9e-64 247.7 178 72.5
ATR0681G053 Amborella trichopoda HOM05D005995 ORTHO05D007362 1.2e-63 246.9 182 72.0
Ca_14969_v3 Cicer arietinum L. HOM05D005995 ORTHO05D007362 3.4e-63 245.4 176 72.2
DCAR_015647 Daucus carota HOM05D005995 ORTHO05D007362 4.5e-63 245.0 180 72.2
ClCG03G000500 Citrullus lanatus HOM05D005995 ORTHO05D007362 7.7e-63 244.2 178 71.9
MELO3C020526.2 Cucumis melo HOM05D005995 ORTHO05D007362 2.9e-62 242.3 178 71.3
vmacro02942 Vaccinium macrocarpon HOM05D005995 ORTHO05D007362 2.9e-62 242.3 166 75.3
CsaV3_1G036430 Cucumis sativus L. HOM05D005995 ORTHO05D007362 3.8e-62 241.9 178 70.8
FvH4_3g39150 Fragaria vesca HOM05D005995 ORTHO05D007362 5.0e-62 241.5 179 72.1
Gohir.A13G233500 Gossypium hirsutum HOM05D005995 ORTHO05D007362 6.5e-62 241.1 153 80.4
Lj6g0019722 Lotus japonicus HOM05D005995 ORTHO05D007362 6.5e-62 241.1 166 77.1
CANSAT54G2854 Cannabis sativa HOM05D005995 ORTHO05D007362 2.5e-61 239.2 177 70.6
FAN11G1452 Fragaria x ananassa HOM05D005995 ORTHO05D007362 3.2e-61 238.8 179 71.5
MD03G1063100 Malus domestica HOM05D005995 ORTHO05D007362 4.2e-61 238.4 181 71.8
Lalb_Chr20g0114841 Lupinus albus HOM05D005995 ORTHO05D007362 5.5e-61 238.0 180 70.0
MSTRG.10034 Avicennia marina HOM05D005995 ORTHO05D007362 9.4e-61 237.3 176 69.9
Oeu031050.1 Olea europaea HOM05D005995 ORTHO05D007362 9.4e-61 237.3 178 73.0
RcHm_v2.0_Chr5g0070551 Rosa chinensis HOM05D005995 ORTHO05D007362 9.4e-61 237.3 179 70.4
Atru.chr3.4142 Acer truncatum HOM05D005995 ORTHO05D007362 1.2e-60 236.9 239 58.6
Eucgr.B02232 Eucalyptus grandis HOM05D005995 ORTHO05D007362 1.2e-60 236.9 147 78.9
Peaxi162Scf00540g00015 Petunia axillaris HOM05D005995 ORTHO05D007362 1.2e-60 236.9 180 73.3
Actinidia02782 Actinidia chinensis HOM05D005995 ORTHO05D007362 4.6e-60 235.0 135 86.7
Glyma.18G060000 Glycine max HOM05D005995 ORTHO05D007362 4.6e-60 235.0 165 75.8
Lalb_Chr18g0051191 Lupinus albus HOM05D005995 ORTHO05D007362 4.6e-60 235.0 179 70.4
Psat0s2070g0120 Pisum sativum HOM05D005995 ORTHO05D007362 7.9e-60 234.2 178 69.7
arahy.Tifrunner.gnm1.ann1.6174C5 Arachis hypogaea HOM05D005995 ORTHO05D007362 2.3e-59 232.6 175 72.6
Medtr3g465040 Medicago truncatula HOM05D005995 ORTHO05D007362 6.7e-59 231.1 178 68.5
PGR031G2980 Punica granatum HOM05D005995 ORTHO05D007362 1.1e-58 230.3 180 69.4
Sabra16G0173300 Salix brachista HOM05D005995 ORTHO05D007362 2.0e-58 229.6 207 62.8
AL8G34810 Arabidopsis lyrata HOM05D005995 ORTHO05D007362 2.6e-58 229.2 173 69.4
TPR.G32896 Trifolium pratense HOM05D005995 ORTHO05D007362 5.7e-58 228.0 179 69.3
CARHR272410 Cardamine hirsuta HOM05D005995 ORTHO05D007362 7.4e-58 227.6 173 66.5
AT5G58575 Arabidopsis thaliana HOM05D005995 ORTHO05D007362 9.7e-58 227.3 173 68.8
Gohir.D13G239100 Gossypium hirsutum HOM05D005995 ORTHO05D007362 9.7e-58 227.3 153 78.4
Gorai.013G270000 Gossypium raimondii HOM05D005995 ORTHO05D007362 9.7e-58 227.3 153 78.4
Prupe.6G053100 Prunus persica HOM05D005995 ORTHO05D007362 1.3e-57 226.9 180 68.9
Sp6g20270 Schrenkiella parvula HOM05D005995 ORTHO05D007362 2.8e-57 225.7 173 67.6
Carub.0008s1918 Capsella rubella HOM05D005995 ORTHO05D007362 1.1e-56 223.8 173 67.1
PSO017G3188 Papaver somniferum HOM05D005995 ORTHO05D007362 3.1e-56 222.2 138 81.2
Nitab4.5_0002043g0030 Nicotiana tabacum HOM05D005995 ORTHO05D007362 4.1e-56 221.9 180 68.9
CDE10G1344 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 6.9e-56 221.1 173 67.6
PSO170G4292 Papaver somniferum HOM05D005995 ORTHO05D007362 1.5e-55 219.9 138 80.4
THA.LOC104799390 Tarenaya hassleriana HOM05D005995 ORTHO05D007362 3.4e-55 218.8 165 70.9
MD11G1066600 Malus domestica HOM05D005995 ORTHO05D007362 5.0e-54 214.9 181 68.0
Thhalv10014805m.g Eutrema salsugineum HOM05D005995 ORTHO05D007362 6.5e-54 214.5 173 65.3
Sc06g0010410 Simmondsia chinensis HOM05D005995 ORTHO05D007362 6.5e-54 214.5 137 79.6
SGA_v2.0_scaffold371G50155 Striga asiatica HOM05D005995 ORTHO05D007362 8.5e-54 214.2 159 67.9
Migut.N00147 Erythranthe guttata HOM05D005995 ORTHO05D007362 3.6e-52 208.8 178 64.0
HanXRQChr11g0334701 Helianthus annuus HOM05D005995 ORTHO05D007362 7.9e-52 207.6 133 77.4
MD11G1066800 Malus domestica HOM05D005995 ORTHO05D007362 1.4e-51 206.8 158 69.6
ECA248G1932 Erigeron canadensis HOM05D005995 ORTHO05D007362 2.3e-51 206.1 138 75.4
CDE10G0962 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 5.2e-51 204.9 165 67.3
BcaB01g04505 Brassica carinata HOM05D005995 ORTHO05D007362 1.7e-49 199.9 135 71.9
A03p12120 Brassica napus HOM05D005995 ORTHO05D007362 2.2e-49 199.5 156 66.0
BraA03t10524Z Brassica rapa HOM05D005995 ORTHO05D007362 2.2e-49 199.5 156 66.0
BcaC01g06637 Brassica carinata HOM05D005995 ORTHO05D007362 3.7e-49 198.7 149 68.5
unitig_62.g23487 Utricularia gibba HOM05D005995 ORTHO05D007362 4.8e-49 198.4 178 63.5
TWI79G0924 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 6.3e-49 198.0 179 62.0
BolC3t13867H Brassica oleracea HOM05D005995 ORTHO05D007362 8.2e-49 197.6 156 65.4
HPP92_012020 Vanilla planifolia HOM05D005995 ORTHO05D007362 8.2e-49 197.6 181 61.9
MBI03_g03955_MAGBIO Magnolia biondii HOM05D005995 ORTHO05D007362 4.1e-48 195.3 178 60.7
Aa31LG11G350 Aethionema arabicum HOM05D005995 ORTHO05D007362 7.0e-48 194.5 174 60.3
Lsat_1_v5_gn_5_173181 Lactuca sativa HOM05D005995 ORTHO05D007362 1.2e-47 193.7 122 77.9
Lj1P130T21 Lonicera japonica HOM05D005995 ORTHO05D007362 3.8e-46 188.7 107 86.0
Sed0014404 Sechium edule HOM05D005995 ORTHO05D007362 6.5e-46 188.0 163 65.6
BcaNung06849 Brassica carinata HOM05D002227 ORTHO05D007362 8.5e-46 187.6 135 68.9
MD11G1152800 Malus domestica HOM05D005995 ORTHO05D007362 2.1e-44 183.0 114 77.2
AUR62002337 Chenopodium quinoa HOM05D005995 ORTHO05D007362 1.0e-43 180.6 124 73.4
TWI31G1135 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 1.3e-41 173.7 143 64.3
Mapoly0008s0254 Marchantia polymorpha HOM05D005995 ORTHO05D007362 1.1e-40 170.6 143 62.9
SEGI_16655 Sequoiadendron giganteum HOM05D005995 ORTHO05D007362 5.3e-40 168.3 182 53.3
Gohir.A05G107700 Gossypium hirsutum HOM05D005995 ORTHO05D007362 1.3e-38 163.7 166 57.2
Zm00001eb286290 Zea mays HOM05D005995 ORTHO05D007362 1.5e-37 160.2 187 51.3
Os05g0351500 Oryza sativa ssp. japonica HOM05D005995 ORTHO05D007362 4.2e-37 158.7 181 51.9
Gohir.D05G107900 Gossypium hirsutum HOM05D005995 ORTHO05D007362 3.4e-34 149.1 166 54.2
C03p14210 Brassica napus HOM05D005995 ORTHO05D007362 4.1e-32 142.1 113 62.8
Pp3c7_14690 Physcomitrium patens HOM05D005995 ORTHO05D007362 5.4e-32 141.7 143 56.6
Pp3c11_11530 Physcomitrium patens HOM05D001687 ORTHO05D001608 2.3e-27 126.3 146 49.3
SMO358G0374 Selaginella moellendorffii HOM05D005995 ORTHO05D007362 1.3e-25 120.6 99 60.6
AagrBONN_evm.TU.Sc2ySwM_344.2127 Anthoceros agrestis HOM05D005995 ORTHO05D007362 2.8e-25 119.4 110 56.4
BcaC01g06639 Brassica carinata HOM05D005995 ORTHO05D007362 3.1e-24 115.9 166 44.0
MD11G1153100 Malus domestica HOM05D005995 ORTHO05D007362 3.5e-23 112.5 80 71.2
Actinidia32626 Actinidia chinensis HOM05D005995 ORTHO05D007362 1.0e-22 110.9 72 80.6
Gorai.009G112000 Gossypium raimondii HOM05D005995 ORTHO05D007362 3.8e-22 109.0 111 54.1
HPP92_013780 Vanilla planifolia HOM05D005995 ORTHO05D007362 2.1e-20 103.2 85 62.4
CBR_g49952 Chara braunii HOM05D000019 ORTHO05D000002 2.0e-18 96.7 137 42.3
MD11G1071300 Malus domestica HOM05D005995 ORTHO05D007362 5.7e-18 95.1 82 64.6
Cre17.g719550 Chlamydomonas reinhardtii HOM05D005995 ORTHO05D007362 8.0e-12 74.7 54 61.1
Nn2g14856 Nelumbo nucifera HOM05D005995 ORTHO05D007362 1.7e-09 67.0 61 60.7
Pp3c4_14820 Physcomitrium patens HOM05D005995 ORTHO05D311899 3.7e-09 65.9 116 37.1
Medtr6g460490 Medicago truncatula HOM05D005995 ORTHO05D007362 1.6e-07 60.5 35 80.0
MD11G1071400 Malus domestica HOM05D005995 ORTHO05D007362 1.3e-06 57.4 43 69.8
MCO04G081 Micromonas commoda HOM05D005995 ORTHO05D007362 1.3e-06 57.4 121 37.2


User provided reference genes

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