Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10022664m.g Citrus clementina HOM05D008044 ORTHO05D010106 1.1e-86 323.2 154 100.0
Sabra15G0006200 Salix brachista HOM05D002361 ORTHO05D002843 2.0e-59 232.6 161 71.4
Atru.chr12.2313 Acer truncatum HOM05D008044 ORTHO05D010106 1.7e-58 229.6 166 69.9
Lalb_Chr23g0271711 Lupinus albus HOM05D008044 ORTHO05D010106 1.7e-58 229.6 162 71.0
CiPaw.06G043900 Carya illinoinensis HOM05D008044 ORTHO05D010106 2.9e-58 228.8 162 69.8
GSVIVG01038604001 Vitis vinifera HOM05D008044 ORTHO05D010106 2.4e-57 225.7 166 69.9
Glyma.04G232600 Glycine max HOM05D008044 ORTHO05D010106 4.1e-57 224.9 166 65.1
MELO3C019381.2 Cucumis melo HOM05D008044 ORTHO05D010106 9.2e-57 223.8 164 67.1
Sed0010771 Sechium edule HOM05D008044 ORTHO05D010106 1.2e-56 223.4 164 65.9
Phvul.009G048200 Phaseolus vulgaris HOM05D008044 ORTHO05D010106 1.6e-56 223.0 160 65.6
Glyma.06G132400 Glycine max HOM05D008044 ORTHO05D010106 2.0e-56 222.6 166 65.7
Manes.01G037300 Manihot esculenta HOM05D008044 ORTHO05D010106 4.6e-56 221.5 162 67.9
CsaV3_3G019660 Cucumis sativus L. HOM05D008044 ORTHO05D010106 5.9e-56 221.1 164 66.5
Thecc.03G204500 Theobroma cacao HOM05D008044 ORTHO05D010106 1.0e-55 220.3 164 67.7
Duzib205G1586 Durio zibethinus HOM05D008044 ORTHO05D010106 2.9e-55 218.8 161 69.6
Hund11636 Selenicereus undatus HOM05D008044 ORTHO05D010106 2.9e-55 218.8 167 64.7
TPR.G33642 Trifolium pratense HOM05D008044 ORTHO05D010106 5.0e-55 218.0 166 64.5
Medtr3g092020 Medicago truncatula HOM05D008044 ORTHO05D010106 6.6e-55 217.6 163 63.2
arahy.Tifrunner.gnm1.ann1.QU8WMY Arachis hypogaea HOM05D008044 ORTHO05D010106 1.9e-54 216.1 166 65.1
CSS0007407 Camellia sinensis var. sinensis HOM05D008044 ORTHO05D010106 2.5e-54 215.7 161 68.3
Dinv29244 Davidia involucrata HOM05D008044 ORTHO05D010106 2.5e-54 215.7 163 66.9
Gorai.003G122500 Gossypium raimondii HOM05D008044 ORTHO05D010106 3.3e-54 215.3 158 68.4
Gohir.D03G116200 Gossypium hirsutum HOM05D008044 ORTHO05D010106 4.3e-54 214.9 158 68.4
QL09p007646 Quercus lobata HOM05D008044 ORTHO05D010106 4.3e-54 214.9 193 60.1
AUR62035573 Chenopodium quinoa HOM05D008044 ORTHO05D010106 7.3e-54 214.2 162 65.4
Dinv35361 Davidia involucrata HOM05D008044 ORTHO05D010106 7.3e-54 214.2 164 65.9
Gohir.A03G051500 Gossypium hirsutum HOM05D008044 ORTHO05D010106 9.5e-54 213.8 158 67.7
Eucgr.A01433 Eucalyptus grandis HOM05D008044 ORTHO05D010106 1.2e-53 213.4 158 70.3
Cfa016194 Carpinus fangiana HOM05D008044 ORTHO05D010106 1.6e-53 213.0 162 67.9
arahy.Tifrunner.gnm1.ann1.4AVA7A Arachis hypogaea HOM05D008044 ORTHO05D010106 2.8e-53 212.2 166 63.9
Lj1g0025539 Lotus japonicus HOM05D008044 ORTHO05D010106 3.6e-53 211.8 167 62.9
Psat5g074880 Pisum sativum HOM05D008044 ORTHO05D010106 4.7e-53 211.5 163 62.6
MSTRG.8632 Avicennia marina HOM05D008044 ORTHO05D010106 1.4e-52 209.9 158 66.5
TAR636G0016 Trochodendron aralioides HOM05D008044 ORTHO05D010106 4.0e-52 208.4 163 66.3
PSO063G1947 Papaver somniferum HOM05D008044 ORTHO05D010106 6.8e-52 207.6 163 63.2
DCAR_020347 Daucus carota HOM05D008044 ORTHO05D010106 8.9e-52 207.2 160 62.5
Cc02_g01150 Coffea canephora HOM05D008044 ORTHO05D010106 1.2e-51 206.8 160 67.5
HanXRQChr04g0100441 Helianthus annuus HOM05D008044 ORTHO05D010106 7.5e-51 204.1 160 64.4
SGA_v2.0_scaffold44G16829 Striga asiatica HOM05D008044 ORTHO05D010106 9.8e-51 203.8 159 64.2
Aqoxy5G02418 Aquilegia oxysepala HOM05D008044 ORTHO05D010106 2.2e-50 202.6 162 63.0
Sc25g0000980 Simmondsia chinensis HOM05D008044 ORTHO05D010106 2.2e-50 202.6 166 62.7
AUR62006056 Chenopodium quinoa HOM05D008044 ORTHO05D010106 2.9e-50 202.2 164 61.6
Lsat_1_v5_gn_2_135221 Lactuca sativa HOM05D008044 ORTHO05D010106 2.9e-50 202.2 166 63.9
PGR042G2636 Punica granatum HOM05D008044 ORTHO05D010106 8.3e-50 200.7 163 65.6
Migut.F00176 Erythranthe guttata HOM05D008044 ORTHO05D010106 1.1e-49 200.3 158 63.3
CAN.G481.61 Capsicum annuum HOM05D008044 ORTHO05D010106 1.4e-49 199.9 155 63.2
PGSC0003DMG400018537 Solanum tuberosum HOM05D008044 ORTHO05D010106 1.9e-49 199.5 157 61.8
Solyc03g082670.3 Solanum lycopersicum HOM05D008044 ORTHO05D010106 7.0e-49 197.6 157 61.8
Nitab4.5_0008197g0010 Nicotiana tabacum HOM05D008044 ORTHO05D010106 1.6e-48 196.4 154 64.3
ClCG05G009120 Citrullus lanatus HOM05D008044 ORTHO05D010106 2.3e-47 192.6 169 58.6
CANSAT21G1192 Cannabis sativa HOM05D008044 ORTHO05D010106 3.3e-46 188.7 156 62.2
Haze_00261 Corylus avellana HOM05D008044 ORTHO05D010106 7.3e-46 187.6 134 70.1
Zm00001eb187590 Zea mays HOM05D008044 ORTHO05D010106 2.1e-45 186.0 151 58.9
ATR0620G028 Amborella trichopoda HOM05D008044 ORTHO05D010106 1.8e-44 183.0 159 58.5
EL10Ac3g05235 Beta vulgaris HOM05D008044 ORTHO05D010106 2.3e-44 182.6 137 65.0
SalBow4G0010 Salvia bowleyana HOM05D008044 ORTHO05D010106 4.0e-44 181.8 160 58.1
CiPaw.05G200900 Carya illinoinensis HOM05D008044 ORTHO05D010106 5.2e-44 181.4 162 59.9
PSO782G0454 Papaver somniferum HOM05D008044 ORTHO05D010106 4.4e-43 178.3 141 63.1
MBI04_g11918_MAGBIO Magnolia biondii HOM05D008044 ORTHO05D010106 4.9e-42 174.9 186 53.2
Ca_16735_v3 Cicer arietinum L. HOM05D008044 ORTHO05D010106 6.4e-42 174.5 132 66.7
COL.COLO4_16822 Corchorus olitorius HOM05D004333 ORTHO05D005363 1.4e-41 173.3 137 67.2
Oeu037043.1 Olea europaea HOM05D001626 ORTHO05D010106 1.9e-41 172.9 156 57.7
SGA_v2.0_scaffold18G08440 Striga asiatica HOM05D008044 ORTHO05D010106 3.2e-41 172.2 159 56.0
Actinidia08675 Actinidia chinensis HOM05D008044 ORTHO05D010106 5.4e-41 171.4 132 65.9
SEGI_00721 Sequoiadendron giganteum HOM05D008044 ORTHO05D010106 6.0e-40 167.9 176 50.0
Nitab4.5_0010367g0020 Nicotiana tabacum HOM05D008044 ORTHO05D010106 1.7e-39 166.4 132 60.6
Hma1.2p1_0512F.1_g169310 Hydrangea macrophylla HOM05D008044 ORTHO05D010106 1.1e-36 157.1 130 63.1
Ah.07g205140 Amaranthus hybridus HOM05D008044 ORTHO05D010106 1.8e-36 156.4 162 53.1
Sopen03g022430 Solanum pennellii HOM05D008044 ORTHO05D010106 2.3e-36 156.0 123 62.6
Rhsim03G0212200 Rhododendron simsii HOM05D004333 ORTHO05D005363 2.0e-35 152.9 125 62.4
Zm00001eb421680 Zea mays HOM05D001260 ORTHO05D010106 7.3e-30 134.4 94 61.7
CDE02G3408 Ceratophyllum demersum HOM05D008044 ORTHO05D010106 6.2e-29 131.3 110 54.5
Peaxi162Scf00740g00427 Petunia axillaris HOM05D008044 ORTHO05D010106 6.8e-28 127.9 154 45.5
VMungo1309G3147 Vigna mungo HOM05D004333 ORTHO05D005363 1.3e-26 123.6 80 66.2
Os02g0686500 Oryza sativa ssp. japonica HOM05D008044 ORTHO05D010106 7.8e-24 114.4 80 61.2
Mapoly0007s0051 Marchantia polymorpha HOM05D008044 ORTHO05D010106 3.9e-23 112.1 161 36.0
AagrBONN_evm.TU.Sc2ySwM_117.1515 Anthoceros agrestis HOM05D008044 ORTHO05D010106 9.6e-22 107.5 188 32.4
Lsat_1_v5_gn_9_14140 Lactuca sativa HOM05D008044 ORTHO05D010106 4.0e-20 102.1 127 48.8
Nn1g00365 Nelumbo nucifera HOM05D008044 ORTHO05D010106 1.6e-16 90.1 83 62.7
ECA238G1983 Erigeron canadensis HOM05D008044 ORTHO05D010106 7.9e-16 87.8 83 60.2


User provided reference genes

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