Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 2.9e-227 791.6 402 100.0
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 1.2e-164 583.6 405 75.1
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 1.1e-162 577.0 410 72.9
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 3.4e-159 565.5 413 72.4
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 7.0e-157 557.8 420 70.7
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 1.6e-156 556.6 413 71.4
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 5.9e-156 554.7 417 70.3
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 2.2e-155 552.7 413 70.5
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 7.2e-154 547.7 417 71.0
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 3.6e-153 545.4 413 69.7
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 9.8e-151 537.3 410 69.8
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 1.7e-150 536.6 408 69.1
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 3.1e-149 532.3 414 70.5
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 1.2e-148 530.4 410 69.5
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 1.6e-148 530.0 410 69.3
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 1.6e-148 530.0 414 70.3
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 2.0e-148 529.6 410 69.3
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 1.6e-145 520.0 405 67.4
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 6.1e-145 518.1 418 65.6
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 8.0e-145 517.7 418 65.6
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 1.0e-144 517.3 405 67.9
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 5.2e-144 515.0 406 68.2
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 1.7e-142 510.0 419 63.7
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 8.3e-142 507.7 412 68.0
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 1.1e-141 507.3 408 67.6
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 2.4e-141 506.1 405 65.9
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 4.1e-141 505.4 419 63.7
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 2.0e-140 503.1 419 62.8
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 3.5e-140 502.3 404 66.3
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 5.9e-140 501.5 405 64.9
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 1.0e-139 500.7 409 66.7
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 2.3e-139 499.6 395 68.4
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 8.6e-139 497.7 404 64.6
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 2.5e-138 496.1 421 65.1
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 2.5e-138 496.1 404 66.1
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 3.3e-138 495.7 410 65.9
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 4.3e-138 495.4 403 66.3
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 6.2e-137 491.5 375 70.1
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 1.4e-136 490.3 401 64.8
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 3.1e-136 489.2 412 65.3
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 1.5e-135 486.9 408 63.2
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 1.5e-135 486.9 412 64.8
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 4.4e-135 485.3 430 62.3
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 3.7e-134 482.3 413 64.4
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 1.1e-133 480.7 407 62.7
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 1.4e-133 480.3 408 65.4
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 1.4e-133 480.3 412 62.9
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 1.9e-133 479.9 400 64.5
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 3.2e-133 479.2 414 65.7
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 1.6e-132 476.9 396 65.2
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 1.6e-132 476.9 413 63.0
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 2.7e-132 476.1 381 65.4
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 3.5e-132 475.7 414 64.0
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 6.0e-132 474.9 405 61.2
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 7.8e-132 474.6 388 63.9
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 1.0e-131 474.2 394 64.0
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 7.3e-130 468.0 410 62.4
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 3.6e-129 465.7 384 65.4
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 1.1e-128 464.2 405 61.7
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 1.1e-128 464.2 407 63.1
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 8.9e-128 461.1 410 61.2
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 8.9e-128 461.1 402 60.7
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 1.5e-127 460.3 401 64.1
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 4.4e-127 458.8 439 60.1
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 9.8e-127 457.6 406 60.6
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.2e-126 456.4 334 71.6
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 2.9e-126 456.1 412 60.0
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 8.3e-126 454.5 403 62.0
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 2.7e-124 449.5 401 61.1
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 3.5e-124 449.1 360 66.7
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 5.1e-123 445.3 336 68.5
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 1.5e-122 443.7 425 57.6
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 1.2e-121 440.7 433 57.0
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 3.6e-121 439.1 310 73.2
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 3.6e-121 439.1 398 60.1
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 9.9e-119 431.0 409 59.2
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 2.9e-118 429.5 403 57.6
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 9.2e-117 424.5 413 58.4
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 2.1e-116 423.3 383 60.3
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 2.7e-116 422.9 405 57.5
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 5.1e-115 418.7 398 58.3
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 6.6e-115 418.3 366 63.7
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 6.6e-115 418.3 462 54.5
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 4.0e-112 409.1 423 53.0
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 7.1e-109 398.3 392 53.6
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 3.5e-108 396.0 355 64.2
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 5.8e-103 378.6 409 55.0
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 5.6e-98 362.1 366 55.2
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.3e-97 360.9 328 62.8
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 6.2e-97 358.6 352 51.7
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 9.0e-96 354.8 335 61.2
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.5e-95 354.0 337 60.8
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 1.5e-95 354.0 355 56.3
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.8e-94 349.4 296 65.2
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 6.4e-94 348.6 466 45.5
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.2e-93 346.3 296 64.9
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.2e-93 346.3 296 64.9
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.2e-93 346.3 296 64.9
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 3.5e-92 342.8 403 46.2
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 1.0e-91 341.3 325 53.8
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 6.9e-88 328.6 284 64.1
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 8.4e-86 321.6 435 43.9
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 6.7e-83 312.0 294 59.9
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 1.4e-77 294.3 213 72.3
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 1.5e-71 274.2 270 58.1
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 2.0e-63 247.3 185 68.1
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 8.5e-62 241.9 223 57.8
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 2.0e-50 204.1 587 28.8
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 5.2e-35 152.9 177 45.8
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 2.1e-28 131.0 93 75.3
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 1.8e-27 127.9 211 38.4
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 7.0e-24 115.9 137 48.9
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 2.0e-18 97.8 159 38.4
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 3.4e-18 97.1 123 46.3
MBI05_g26894_MAGBIO Magnolia biondii HOM05D003110 ORTHO05D003585 2.4e-08 64.3 136 36.0
Hma1.2p1_0649F.1_g195356 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.5e-07 60.5 73 56.2
Hma1.2p1_0649F.1_g195390 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.5e-07 60.5 73 56.2
Hma1.2p1_3802F.1_g337632 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.5e-07 60.5 73 56.2
Haze_04836 Corylus avellana HOM05D006533 ORTHO05D008625 6.0e-07 59.7 59 62.7
Rhsim12G0119200 Rhododendron simsii HOM05D006533 ORTHO05D338813 8.6e-06 55.8 39 66.7


User provided reference genes

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