Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10019503m.g Citrus clementina HOM05D006918 ORTHO05D008525 6.6e-60 236.1 116 100.0
Atru.chr12.2189 Acer truncatum HOM05D006918 ORTHO05D008525 2.6e-40 171.0 115 74.8
Thecc.07G154400 Theobroma cacao HOM05D006918 ORTHO05D008525 2.4e-38 164.5 116 71.6
Cfa019430 Carpinus fangiana HOM05D006918 ORTHO05D008525 1.3e-36 158.7 116 70.7
CiPaw.12G045100 Carya illinoinensis HOM05D006918 ORTHO05D008525 1.7e-36 158.3 117 69.2
Potri.011G144300 Populus trichocarpa HOM05D006918 ORTHO05D008525 2.3e-36 157.9 116 69.8
Manes.14G015600 Manihot esculenta HOM05D006918 ORTHO05D008525 2.5e-35 154.5 116 69.0
Haze_08532 Corylus avellana HOM05D006918 ORTHO05D008525 3.3e-35 154.1 116 69.0
Sabra11G0128500 Salix brachista HOM05D006918 ORTHO05D008525 5.6e-35 153.3 116 69.0
Potri.001G457300 Populus trichocarpa HOM05D006918 ORTHO05D008525 7.3e-35 152.9 116 68.1
Dinv19625 Davidia involucrata HOM05D006918 ORTHO05D008525 6.2e-34 149.8 116 65.5
CSS0032788 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 1.1e-33 149.1 116 64.7
Sabra16G0310000 Salix brachista HOM05D006918 ORTHO05D008525 1.4e-33 148.7 116 64.7
Gohir.D05G330400 Gossypium hirsutum HOM05D006918 ORTHO05D008525 2.4e-33 147.9 116 63.8
Gorai.009G354800 Gossypium raimondii HOM05D006918 ORTHO05D008525 2.4e-33 147.9 116 63.8
ClCG11G016340 Citrullus lanatus HOM05D006918 ORTHO05D008525 3.1e-33 147.5 116 63.8
Duzib187G0932 Durio zibethinus HOM05D006918 ORTHO05D008525 3.1e-33 147.5 116 65.5
Duzib187G1351 Durio zibethinus HOM05D006918 ORTHO05D008525 3.1e-33 147.5 116 65.5
Cpa.g.sc10.35 Carica papaya HOM05D006918 ORTHO05D008525 9.0e-33 146.0 118 64.4
Sed0019951 Sechium edule HOM05D006918 ORTHO05D008525 2.6e-32 144.4 116 62.1
QL04p074473 Quercus lobata HOM05D006918 ORTHO05D008525 7.6e-32 142.9 117 64.1
CSS0007445 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 9.9e-32 142.5 116 63.8
TWI39G1081 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 9.9e-32 142.5 114 64.0
MD10G1198700 Malus domestica HOM05D006918 ORTHO05D008525 2.2e-31 141.4 116 63.8
CSS0011318 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 4.9e-31 140.2 116 62.9
CsaV3_4G031810 Cucumis sativus L. HOM05D006918 ORTHO05D008525 4.9e-31 140.2 116 61.2
Sc03g0007940 Simmondsia chinensis HOM05D006918 ORTHO05D008525 2.4e-30 137.9 116 61.2
MELO3C010560.2 Cucumis melo HOM05D006918 ORTHO05D008525 7.1e-30 136.3 116 60.3
CANSAT56G0998 Cannabis sativa HOM05D006918 ORTHO05D008525 2.1e-29 134.8 116 57.8
Prupe.4G143000 Prunus persica HOM05D006918 ORTHO05D008525 2.7e-29 134.4 116 61.2
TWI38G1170 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 1.0e-28 132.5 116 59.5
Eucgr.F03183 Eucalyptus grandis HOM05D006918 ORTHO05D008525 3.0e-28 131.0 116 58.6
PSO675G9078 Papaver somniferum HOM05D006918 ORTHO05D008525 3.9e-28 130.6 115 58.3
Ah.04g163440 Amaranthus hybridus HOM05D006918 ORTHO05D008525 5.1e-28 130.2 114 60.5
TAR627G0890 Trochodendron aralioides HOM05D006918 ORTHO05D008525 5.1e-28 130.2 109 58.7
PSO541G4556 Papaver somniferum HOM05D006918 ORTHO05D008525 8.7e-28 129.4 97 64.9
RcHm_v2.0_Chr5g0026921 Rosa chinensis HOM05D006918 ORTHO05D008525 8.7e-28 129.4 117 60.7
Lj3g0009186 Lotus japonicus HOM05D006918 ORTHO05D008525 1.5e-27 128.6 118 59.3
MD05G1216400 Malus domestica HOM05D006918 ORTHO05D008525 1.9e-27 128.3 116 57.8
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 2.5e-27 127.9 119 61.3
Cc05_g15990 Coffea canephora HOM05D006918 ORTHO05D008525 3.3e-27 127.5 116 56.9
FAN21G2086 Fragaria x ananassa HOM05D006918 ORTHO05D008525 3.3e-27 127.5 117 60.7
FAN21G2559 Fragaria x ananassa HOM05D006918 ORTHO05D008525 3.3e-27 127.5 117 60.7
FvH4_3g15990 Fragaria vesca HOM05D006918 ORTHO05D008525 4.3e-27 127.1 117 60.7
FAN11G3197 Fragaria x ananassa HOM05D006918 ORTHO05D008525 4.3e-27 127.1 117 60.7
FAN25G3485 Fragaria x ananassa HOM05D006918 ORTHO05D008525 4.3e-27 127.1 117 59.8
EL10Ac4g08564 Beta vulgaris HOM05D006918 ORTHO05D008525 7.4e-27 126.3 114 60.5
Nn7g37872 Nelumbo nucifera HOM05D006918 ORTHO05D008525 7.4e-27 126.3 116 56.0
AUR62043059 Chenopodium quinoa HOM05D006918 ORTHO05D008525 2.1e-26 124.8 114 59.6
DCAR_013746 Daucus carota HOM05D006918 ORTHO05D008525 3.7e-26 124.0 110 59.1
AUR62044624 Chenopodium quinoa HOM05D006918 ORTHO05D008525 4.8e-26 123.6 114 58.8
Lalb_Chr25g0285091 Lupinus albus HOM05D006918 ORTHO05D008525 4.8e-26 123.6 119 57.1
Phvul.005G056300 Phaseolus vulgaris HOM05D006918 ORTHO05D008525 4.8e-26 123.6 118 55.9
VMungo1080G0996 Vigna mungo HOM05D006918 ORTHO05D008525 6.2e-26 123.2 118 55.1
DCAR_016820 Daucus carota HOM05D006918 ORTHO05D008525 1.1e-25 122.5 116 55.2
Glyma.08G172400 Glycine max HOM05D006918 ORTHO05D008525 4.0e-25 120.6 118 55.1
Oeu056983.1 Olea europaea HOM05D006918 ORTHO05D008525 1.2e-24 119.0 116 56.0
Glyma.15G254900 Glycine max HOM05D006918 ORTHO05D008525 2.6e-24 117.9 118 53.4
Thhalv10018334m.g Eutrema salsugineum HOM05D006918 ORTHO05D008525 9.9e-24 115.9 128 53.9
Lalb_Chr01g0007081 Lupinus albus HOM05D006918 ORTHO05D008525 2.9e-23 114.4 118 51.7
Ca_03688_v3 Cicer arietinum L. HOM05D006918 ORTHO05D008525 6.4e-23 113.2 121 52.9
AT1G79080 Arabidopsis thaliana HOM05D006918 ORTHO05D008525 8.4e-23 112.8 125 51.2
Migut.M01563 Erythranthe guttata HOM05D006918 ORTHO05D008525 8.4e-23 112.8 117 52.1
AL2G39540 Arabidopsis lyrata HOM05D006918 ORTHO05D008525 1.1e-22 112.5 127 53.5
TPR.G9740 Trifolium pratense HOM05D006918 ORTHO05D008525 1.4e-22 112.1 118 54.2
MSTRG.7057 Avicennia marina HOM05D006918 ORTHO05D008525 1.9e-22 111.7 116 50.0
Lsat_1_v5_gn_7_72161 Lactuca sativa HOM05D006918 ORTHO05D008525 2.5e-22 111.3 116 51.7
Peaxi162Scf00452g00086 Petunia axillaris HOM05D006918 ORTHO05D008525 2.5e-22 111.3 124 50.8
Aqoxy6G01201 Aquilegia oxysepala HOM05D006918 ORTHO05D008525 3.2e-22 110.9 114 50.0
CARHR072750 Cardamine hirsuta HOM05D006918 ORTHO05D008525 3.2e-22 110.9 130 50.0
Lalb_Chr19g0133401 Lupinus albus HOM05D006918 ORTHO05D008525 4.2e-22 110.5 117 52.1
Sp5g34130 Schrenkiella parvula HOM05D006918 ORTHO05D008525 7.1e-22 109.8 128 53.1
Lj5A202T40 Lonicera japonica HOM05D006918 ORTHO05D008525 9.3e-22 109.4 120 53.3
Carub.0002s2595 Capsella rubella HOM05D006918 ORTHO05D008525 1.2e-21 109.0 123 54.5
PGR031G3805 Punica granatum HOM05D006918 ORTHO05D008525 1.2e-21 109.0 125 50.4
Aa31LG4G1910 Aethionema arabicum HOM05D001696 ORTHO05D001746 1.6e-21 108.6 125 52.0
Rhsim04G0005900 Rhododendron simsii HOM05D006918 ORTHO05D008525 2.1e-21 108.2 119 52.1
TPR.G9735 Trifolium pratense HOM05D006918 ORTHO05D008525 2.7e-21 107.8 120 53.3
Medtr2g069680 Medicago truncatula HOM05D006918 ORTHO05D008525 3.5e-21 107.5 122 50.8
TPR.G9758 Trifolium pratense HOM05D006918 ORTHO05D008525 6.0e-21 106.7 119 52.9
Nitab4.5_0008437g0030 Nicotiana tabacum HOM05D006918 ORTHO05D008525 1.3e-20 105.5 117 50.4
PGSC0003DMG400022129 Solanum tuberosum HOM05D006918 ORTHO05D008525 1.1e-19 102.4 124 46.8
Nitab4.5_0001749g0050 Nicotiana tabacum HOM05D006918 ORTHO05D008525 1.3e-18 99.0 123 45.5
Lj5C202T5 Lonicera japonica HOM05D006918 ORTHO05D008525 1.6e-18 98.6 122 47.5
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 2.1e-18 98.2 125 48.0
Solyc07g066390.1 Solanum lycopersicum HOM05D006918 ORTHO05D008525 2.8e-18 97.8 124 45.2
Sopen07g034560 Solanum pennellii HOM05D006918 ORTHO05D008525 2.8e-18 97.8 124 45.2
BcaC08g47472 Brassica carinata HOM05D006918 ORTHO05D008525 3.7e-18 97.4 121 49.6
C06p52950 Brassica napus HOM05D006918 ORTHO05D008525 3.7e-18 97.4 121 49.6
TAR636G1403 Trochodendron aralioides HOM05D006918 ORTHO05D008525 4.8e-18 97.1 99 53.5
BcaB02g08665 Brassica carinata HOM05D006918 ORTHO05D008525 4.0e-17 94.0 119 47.9
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 2.6e-16 91.3 121 47.1
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 3.4e-16 90.9 121 47.1
BcaNung04908 Brassica carinata HOM05D006918 ORTHO05D008525 7.6e-16 89.7 107 48.6
HanXRQChr05g0161001 Helianthus annuus HOM05D006918 ORTHO05D008525 7.6e-16 89.7 123 43.9
CAN.G943.32 Capsicum annuum HOM05D006918 ORTHO05D008525 4.9e-15 87.0 130 43.8
Dinv42519 Davidia involucrata HOM05D006918 ORTHO05D008525 1.1e-14 85.9 67 62.7
Psat1g002800 Pisum sativum HOM05D006918 ORTHO05D008525 1.1e-14 85.9 120 46.7
CDE04G0465 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 1.3e-12 79.0 67 58.2
HPP92_013983 Vanilla planifolia HOM05D006918 ORTHO05D008525 9.0e-09 66.2 121 38.0
HPP92_013913 Vanilla planifolia HOM05D006918 ORTHO05D008525 1.5e-08 65.5 82 45.1
SGA_v2.0_scaffold7G03576 Striga asiatica HOM05D006918 ORTHO05D008525 1.3e-07 62.4 87 41.4
ATR1098G023 Amborella trichopoda HOM05D006918 ORTHO05D008525 5.0e-07 60.5 38 65.8
Cfa019933 Carpinus fangiana HOM05D006918 ORTHO05D008525 9.4e-06 56.2 37 70.3


User provided reference genes

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