Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10011646m.g Citrus clementina HOM05D006616 ORTHO05D008435 8.0e-253 876.7 473 100.0
Atru.chr1.1509 Acer truncatum HOM05D006616 ORTHO05D008435 1.7e-154 550.1 478 69.7
Dinv27270 Davidia involucrata HOM05D006616 ORTHO05D008435 3.1e-140 502.7 461 66.6
Potri.006G032200 Populus trichocarpa HOM05D006616 ORTHO05D008435 3.5e-131 472.6 482 60.8
TWI74G0800 Tripterygium wilfordii HOM05D006616 ORTHO05D008435 2.3e-130 469.9 485 60.2
MD00G1150000 Malus domestica HOM05D006616 ORTHO05D008435 1.1e-129 467.6 489 59.9
Prupe.7G020500 Prunus persica HOM05D006616 ORTHO05D008435 3.3e-129 466.1 473 62.2
Actinidia03423 Actinidia chinensis HOM05D006616 ORTHO05D008435 5.6e-129 465.3 461 62.5
Hma1.2p1_2178F.1_g316210 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 8.0e-128 461.5 461 62.0
Manes.09G002500 Manihot esculenta HOM05D006616 ORTHO05D008435 2.6e-126 456.4 480 60.2
Ca_02795_v3 Cicer arietinum L. HOM05D006616 ORTHO05D008435 5.8e-126 455.3 471 61.6
Rhsim11G0071400 Rhododendron simsii HOM05D006616 ORTHO05D008435 2.9e-125 453.0 461 62.3
Sabra06G0021500 Salix brachista HOM05D006616 ORTHO05D008435 2.9e-125 453.0 483 60.2
Lalb_Chr21g0316821 Lupinus albus HOM05D006616 ORTHO05D008435 8.3e-125 451.4 464 60.6
Duzib128G1745 Durio zibethinus HOM05D006616 ORTHO05D008435 1.1e-124 451.1 455 61.1
Thecc.05G123900 Theobroma cacao HOM05D006616 ORTHO05D008435 4.1e-124 449.1 464 60.1
Lj5g0015037 Lotus japonicus HOM05D006616 ORTHO05D008435 2.7e-123 446.4 459 61.7
GSVIVG01025818001 Vitis vinifera HOM05D006616 ORTHO05D008435 4.6e-123 445.7 478 61.1
Hund19065 Selenicereus undatus HOM05D006616 ORTHO05D008435 1.3e-122 444.1 474 60.5
TPR.G13802 Trifolium pratense HOM05D006616 ORTHO05D008435 8.6e-122 441.4 455 61.5
TAR622G0026 Trochodendron aralioides HOM05D006616 ORTHO05D008435 1.1e-121 441.0 461 61.2
VMungo0720G0485 Vigna mungo HOM05D006616 ORTHO05D008435 7.3e-121 438.3 474 57.4
Cfa019948 Carpinus fangiana HOM05D006616 ORTHO05D008435 1.8e-119 433.7 477 59.7
PGR042G1816 Punica granatum HOM05D006616 ORTHO05D008435 5.2e-119 432.2 471 59.4
arahy.Tifrunner.gnm1.ann1.QA0LD5 Arachis hypogaea HOM05D006616 ORTHO05D008435 2.6e-118 429.9 477 58.7
RcHm_v2.0_Chr3g0494671 Rosa chinensis HOM05D006616 ORTHO05D008435 2.6e-118 429.9 459 61.9
Medtr1g051155 Medicago truncatula HOM05D006616 ORTHO05D008435 3.4e-118 429.5 467 60.0
CANSAT78G0100 Cannabis sativa HOM05D006616 ORTHO05D008435 9.8e-118 427.9 475 58.3
Phvul.007G243700 Phaseolus vulgaris HOM05D006616 ORTHO05D008435 9.8e-118 427.9 476 57.1
CSS0027023 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 1.7e-117 427.2 461 59.9
Gohir.A11G305800 Gossypium hirsutum HOM05D006616 ORTHO05D008435 2.9e-117 426.4 448 60.3
arahy.Tifrunner.gnm1.ann1.958W0C Arachis hypogaea HOM05D006616 ORTHO05D008435 8.3e-117 424.9 477 58.1
Gorai.007G351400 Gossypium raimondii HOM05D006616 ORTHO05D008435 9.2e-116 421.4 451 59.0
Cc10_g12770 Coffea canephora HOM05D006616 ORTHO05D008435 1.6e-115 420.6 469 58.0
Eucgr.A02183 Eucalyptus grandis HOM05D006616 ORTHO05D008435 2.7e-115 419.9 457 57.8
Gohir.D11G321200 Gossypium hirsutum HOM05D006616 ORTHO05D008435 7.8e-115 418.3 448 58.9
FAN26G1972 Fragaria x ananassa HOM05D006616 ORTHO05D008435 5.0e-114 415.6 468 59.2
QL07p014063 Quercus lobata HOM05D006616 ORTHO05D008435 3.3e-113 412.9 521 52.8
Aqoxy3G00148 Aquilegia oxysepala HOM05D006616 ORTHO05D008435 9.5e-113 411.4 481 56.1
Psat6g087360 Pisum sativum HOM05D006616 ORTHO05D008435 1.2e-112 411.0 461 58.8
Glyma.02G162000 Glycine max HOM05D006616 ORTHO05D008435 1.6e-112 410.6 462 59.1
Peaxi162Scf00066g00130 Petunia axillaris HOM05D006616 ORTHO05D008435 2.8e-112 409.8 458 59.4
MBI16_g32949_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 3.6e-112 409.5 462 57.6
CAN.G526.15 Capsicum annuum HOM05D006616 ORTHO05D008435 6.2e-112 408.7 463 57.5
Nn3g18184 Nelumbo nucifera HOM05D006616 ORTHO05D008435 1.4e-111 407.5 459 58.2
ECA246G4188 Erigeron canadensis HOM05D006616 ORTHO05D008435 1.8e-111 407.1 460 55.9
FAN28G1824 Fragaria x ananassa HOM05D006616 ORTHO05D008435 4.0e-111 406.0 466 58.2
CiPaw.10G044000 Carya illinoinensis HOM05D006616 ORTHO05D008435 2.0e-110 403.7 516 55.4
AUR62018417 Chenopodium quinoa HOM05D006616 ORTHO05D008435 2.6e-110 403.3 476 54.8
Ah.13g077310 Amaranthus hybridus HOM05D006616 ORTHO05D008435 3.4e-110 402.9 459 56.2
AUR62021025 Chenopodium quinoa HOM05D006616 ORTHO05D008435 2.9e-109 399.8 473 54.5
Oeu038315.2 Olea europaea HOM05D006616 ORTHO05D008435 2.9e-109 399.8 483 54.5
SalBow2G2978 Salvia bowleyana HOM05D006616 ORTHO05D008435 4.9e-109 399.1 476 49.8
CsaV3_3G040470 Cucumis sativus L. HOM05D006616 ORTHO05D008435 1.4e-108 397.5 519 52.6
FAN19G2668 Fragaria x ananassa HOM05D006616 ORTHO05D008435 1.4e-108 397.5 468 56.0
CSS0040058 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 4.1e-108 396.0 457 57.8
HanXRQChr05g0149371 Helianthus annuus HOM05D006616 ORTHO05D008435 1.6e-107 394.0 464 55.0
MSTRG.24176 Avicennia marina HOM05D006616 ORTHO05D008435 2.3e-106 390.2 463 54.4
ATR0326G030 Amborella trichopoda HOM05D006616 ORTHO05D008435 5.1e-106 389.0 468 55.6
THA.LOC104815412 Tarenaya hassleriana HOM05D006616 ORTHO05D008435 5.1e-106 389.0 483 56.7
EL10Ac3g07308 Beta vulgaris HOM05D006616 ORTHO05D008435 5.6e-105 385.6 457 56.5
SGA_v2.0_scaffold25G11136 Striga asiatica HOM05D006616 ORTHO05D008435 5.6e-105 385.6 477 53.7
Sed0024074 Sechium edule HOM05D006616 ORTHO05D008435 2.1e-104 383.6 515 49.3
PSO478G1375 Papaver somniferum HOM05D006616 ORTHO05D008435 1.8e-103 380.6 481 54.1
Solyc11g005110.3 Solanum lycopersicum HOM05D006616 ORTHO05D008435 5.2e-103 379.0 468 55.1
Sopen11g001110 Solanum pennellii HOM05D006616 ORTHO05D008435 7.6e-102 375.2 468 54.7
Aa31LG3G1010 Aethionema arabicum HOM05D006616 ORTHO05D008435 9.9e-102 374.8 465 55.1
Os01g0916300 Oryza sativa ssp. japonica HOM05D006616 ORTHO05D008435 1.3e-101 374.4 471 55.6
Lj7A350T24 Lonicera japonica HOM05D006616 ORTHO05D008435 5.4e-100 369.0 524 45.2
Sp4g23340 Schrenkiella parvula HOM05D006616 ORTHO05D008435 1.2e-99 367.9 485 53.2
Thhalv10002504m.g Eutrema salsugineum HOM05D006616 ORTHO05D008435 1.6e-99 367.5 465 54.2
AL4G39000 Arabidopsis lyrata HOM05D006616 ORTHO05D008435 2.1e-99 367.1 493 52.9
CDE04G3611 Ceratophyllum demersum HOM05D006616 ORTHO05D008435 2.7e-99 366.7 457 55.6
AT2G41020 Arabidopsis thaliana HOM05D006616 ORTHO05D008435 1.0e-98 364.8 496 53.6
Zm00001eb364810 Zea mays HOM05D006616 ORTHO05D008435 1.2e-96 357.8 465 53.1
Migut.N03264 Erythranthe guttata HOM05D006616 ORTHO05D008435 2.4e-95 353.6 489 48.9
BcaC02g12875 Brassica carinata HOM05D006616 ORTHO05D008435 2.6e-94 350.1 489 52.1
C04p68740 Brassica napus HOM05D006616 ORTHO05D008435 5.8e-94 349.0 489 50.3
DCAR_014373 Daucus carota HOM05D006616 ORTHO05D008435 2.9e-93 346.7 456 53.1
HPP92_023122 Vanilla planifolia HOM05D006616 ORTHO05D008435 1.6e-91 340.9 467 52.5
BraA04t18591Z Brassica rapa HOM05D006616 ORTHO05D002641 3.5e-91 339.7 483 52.4
A04p31340 Brassica napus HOM05D006616 ORTHO05D002641 1.3e-90 337.8 482 52.1
BolC4t28379H Brassica oleracea HOM05D006616 ORTHO05D008435 5.1e-90 335.9 482 49.6
CARHR136140 Cardamine hirsuta HOM05D006616 ORTHO05D008435 9.6e-89 331.6 434 53.9
FvH4_1g29230 Fragaria vesca HOM05D006616 ORTHO05D008435 1.3e-88 331.3 456 52.9
Carub.0004s2335 Capsella rubella HOM05D006616 ORTHO05D008435 2.1e-88 330.5 465 52.9
PSO017G2359 Papaver somniferum HOM05D006616 ORTHO05D008435 1.5e-86 324.3 401 56.1
unitig_52.g17546 Utricularia gibba HOM05D006616 ORTHO05D008435 1.9e-84 317.4 460 49.3
Lsat_1_v5_gn_6_110180 Lactuca sativa HOM05D006616 ORTHO05D008435 1.5e-81 307.8 448 50.7
Haze_20291 Corylus avellana HOM05D006616 ORTHO05D008435 2.5e-81 307.0 735 38.4
ClCG10G015990 Citrullus lanatus HOM05D006616 ORTHO05D008435 2.1e-80 303.9 473 46.1
Nitab4.5_0001168g0150 Nicotiana tabacum HOM05D006616 ORTHO05D008435 3.8e-77 293.1 474 40.7
MELO3C009780.2 Cucumis melo HOM05D006616 ORTHO05D008435 1.9e-73 280.8 629 40.5
Pp3c10_1890 Physcomitrium patens HOM05D006616 ORTHO05D008435 1.3e-72 278.1 539 43.2
Pp3c10_1896 Physcomitrium patens HOM05D006616 ORTHO05D008435 1.3e-72 278.1 539 43.2
Mapoly0043s0041 Marchantia polymorpha HOM05D006616 ORTHO05D008435 6.2e-72 275.8 558 40.9
Sc13g0000840 Simmondsia chinensis HOM05D006616 ORTHO05D008435 2.5e-57 227.3 219 59.8
Hma1.2p1_2178F.1_g316200 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 1.1e-52 211.8 257 50.2
Cpa.g.sc33.190 Carica papaya HOM05D006616 ORTHO05D008435 3.0e-50 203.8 245 49.8
Nitab4.5_0003863g0020 Nicotiana tabacum HOM05D006616 ORTHO05D008435 9.7e-49 198.7 256 45.7
SEGI_28853 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 1.8e-47 194.5 360 47.5
Actinidia25416 Actinidia chinensis HOM05D006616 ORTHO05D008435 1.4e-39 168.3 226 46.9
COL.COLO4_33517 Corchorus olitorius HOM05D006616 ORTHO05D008435 4.2e-36 156.8 159 54.7
AagrBONN_evm.TU.Sc2ySwM_228.200 Anthoceros agrestis HOM05D006616 ORTHO05D008435 4.7e-35 153.3 304 36.8
Nitab4.5_0003863g0030 Nicotiana tabacum HOM05D006616 ORTHO05D008435 1.2e-33 148.7 181 48.1
SEGI_15760 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 2.4e-31 141.0 107 69.2
CBR_g8767 Chara braunii HOM05D006616 ORTHO05D008435 5.9e-30 136.3 470 36.0
Psat1g016240 Pisum sativum HOM05D006616 ORTHO05D008435 4.7e-27 126.7 146 51.4
Psat7g065560 Pisum sativum HOM05D006616 ORTHO05D008435 8.0e-27 125.9 147 51.7
Migut.C01363 Erythranthe guttata HOM05D006616 ORTHO05D008435 5.9e-22 109.8 161 44.1
vmacro00862 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 1.3e-21 108.6 101 59.4
SMO339G0010 Selaginella moellendorffii HOM05D006616 ORTHO05D008435 2.9e-21 107.5 87 64.4
FAN23G2418 Fragaria x ananassa HOM05D006616 ORTHO05D008435 8.6e-21 105.9 82 73.2
PSO478G1191 Papaver somniferum HOM05D006616 ORTHO05D008435 4.7e-19 100.1 168 49.4
MCO09G511 Micromonas commoda HOM05D006616 ORTHO05D008435 6.1e-19 99.8 336 40.8
vmacro00863 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 2.3e-18 97.8 82 62.2
MBI16_g47221_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 9.8e-17 92.4 182 40.7
SHI24850 Sapria himalayana HOM05D006616 ORTHO05D008435 1.3e-16 92.0 129 42.6
Actinidia29490 Actinidia chinensis HOM05D006616 ORTHO05D008435 6.6e-13 79.7 82 53.7
BcaC02g07966 Brassica carinata HOM05D001681 ORTHO05D001589 5.6e-12 76.6 51 76.5
Cre12.g527600 Chlamydomonas reinhardtii HOM05D006616 ORTHO05D008435 5.2e-10 70.1 322 32.6


User provided reference genes

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