Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10004585m.g Citrus clementina HOM05D004772 ORTHO05D006892 0.0e+00 1124.4 601 100.0
TWI09G0846 Tripterygium wilfordii HOM05D004772 ORTHO05D006892 3.0e-220 768.8 664 65.5
Thecc.04G291000 Theobroma cacao HOM05D004772 ORTHO05D006892 1.1e-217 760.4 664 65.8
CiPaw.02G079000 Carya illinoinensis HOM05D004772 ORTHO05D006892 1.5e-216 756.5 662 65.6
GSVIVG01035090001 Vitis vinifera HOM05D004772 ORTHO05D006892 2.4e-214 749.2 666 64.9
Gorai.006G077200 Gossypium raimondii HOM05D004772 ORTHO05D006892 5.5e-214 748.0 684 63.0
Gohir.A09G063500 Gossypium hirsutum HOM05D004772 ORTHO05D006892 9.3e-214 747.3 684 62.9
TWI73G1272 Tripterygium wilfordii HOM05D004772 ORTHO05D006892 9.3e-214 747.3 660 63.6
Gohir.D09G062400 Gossypium hirsutum HOM05D004772 ORTHO05D006892 1.3e-212 743.4 684 62.7
TAR362G0678 Trochodendron aralioides HOM05D004772 ORTHO05D006892 3.3e-211 738.8 655 63.8
Dinv29709 Davidia involucrata HOM05D004772 ORTHO05D006892 8.1e-210 734.2 667 63.0
PGR004G0606 Punica granatum HOM05D004772 ORTHO05D006892 4.9e-207 724.9 658 63.4
Cfa015449 Carpinus fangiana HOM05D004772 ORTHO05D006892 1.1e-206 723.8 670 63.6
Cpa.g.sc9.115 Carica papaya HOM05D004772 ORTHO05D006892 2.5e-206 722.6 635 63.9
Potri.008G211400 Populus trichocarpa HOM05D004772 ORTHO05D006892 4.2e-206 721.8 665 63.0
Actinidia18636 Actinidia chinensis HOM05D004772 ORTHO05D006892 7.1e-206 721.1 666 62.8
Potri.010G005600 Populus trichocarpa HOM05D004772 ORTHO05D006892 7.1e-206 721.1 660 63.5
QL06p010892 Quercus lobata HOM05D004772 ORTHO05D006892 9.3e-206 720.7 663 63.0
Eucgr.E01101 Eucalyptus grandis HOM05D004772 ORTHO05D006892 4.6e-205 718.4 655 62.3
MD13G1162200 Malus domestica HOM05D004772 ORTHO05D006892 3.9e-204 715.3 661 63.7
Prupe.1G129500 Prunus persica HOM05D004772 ORTHO05D006892 3.9e-204 715.3 662 63.4
Sabra10G0004800 Salix brachista HOM05D004772 ORTHO05D006892 1.1e-203 713.8 698 60.5
Nn3g21575 Nelumbo nucifera HOM05D004772 ORTHO05D006892 4.8e-202 708.4 669 61.9
RcHm_v2.0_Chr4g0423801 Rosa chinensis HOM05D004772 ORTHO05D006892 2.9e-199 699.1 673 59.4
Hma1.2p1_0078F.1_g040280 Hydrangea macrophylla HOM05D004772 ORTHO05D006892 5.0e-199 698.4 661 61.4
MD16G1162000 Malus domestica HOM05D004772 ORTHO05D006892 1.9e-198 696.4 659 61.3
VMungo1215G3292 Vigna mungo HOM05D004772 ORTHO05D006892 1.9e-198 696.4 661 60.5
CsaV3_6G022660 Cucumis sativus L. HOM05D004772 ORTHO05D006892 1.2e-197 693.7 631 62.0
DCAR_027042 Daucus carota HOM05D004772 ORTHO05D006892 6.1e-197 691.4 652 61.2
Glyma.07G244300 Glycine max HOM05D004772 ORTHO05D006892 1.0e-196 690.6 597 63.3
Lj4g0015807 Lotus japonicus HOM05D004772 ORTHO05D006892 1.0e-196 690.6 624 61.9
Glyma.17G029600 Glycine max HOM05D004772 ORTHO05D006892 3.0e-196 689.1 632 60.8
FvH4_4g18900 Fragaria vesca HOM05D004772 ORTHO05D006892 8.7e-196 687.6 675 59.0
CANSAT78G1075 Cannabis sativa HOM05D004772 ORTHO05D006892 1.5e-195 686.8 661 59.6
Ca_21472_v3 Cicer arietinum L. HOM05D004772 ORTHO05D006892 2.5e-195 686.0 632 60.3
Lalb_Chr13g0298261 Lupinus albus HOM05D004772 ORTHO05D006892 2.5e-195 686.0 579 64.6
PSO731G0023 Papaver somniferum HOM05D004772 ORTHO05D006892 3.3e-195 685.6 654 60.1
Sed0023608 Sechium edule HOM05D004772 ORTHO05D006892 3.3e-195 685.6 630 61.0
Phvul.003G108600 Phaseolus vulgaris HOM05D004772 ORTHO05D006892 9.7e-195 684.1 661 59.9
MELO3C021296.2 Cucumis melo HOM05D004772 ORTHO05D006892 2.2e-194 682.9 658 59.6
Medtr4g120470 Medicago truncatula HOM05D004772 ORTHO05D006892 2.8e-194 682.6 641 59.9
PSO764G0237 Papaver somniferum HOM05D004772 ORTHO05D006892 2.8e-194 682.6 656 60.5
Atru.chr4.2923 Acer truncatum HOM05D004772 ORTHO05D006892 1.2e-192 677.2 606 65.7
FAN07G2363 Fragaria x ananassa HOM05D004772 ORTHO05D006892 2.0e-192 676.4 696 57.2
FAN12G2191 Fragaria x ananassa HOM05D004772 ORTHO05D006892 2.6e-192 676.0 694 57.3
Haze_01138 Corylus avellana HOM05D004772 ORTHO05D006892 3.4e-192 675.6 674 60.5
Haze_01142 Corylus avellana HOM05D004772 ORTHO05D006892 3.4e-192 675.6 674 60.2
Rhsim04G0228200 Rhododendron simsii HOM05D004772 ORTHO05D006892 1.0e-191 674.1 624 62.3
FAN12G3151 Fragaria x ananassa HOM05D004772 ORTHO05D006892 3.8e-191 672.2 694 57.2
ClCG06G004870 Citrullus lanatus HOM05D004772 ORTHO05D006892 4.2e-190 668.7 685 57.4
Cc03_g01340 Coffea canephora HOM05D004772 ORTHO05D006892 4.2e-190 668.7 650 59.2
TPR.G22770 Trifolium pratense HOM05D004772 ORTHO05D006892 3.6e-189 665.6 581 62.5
Duzib151G1106 Durio zibethinus HOM05D004772 ORTHO05D006892 3.0e-188 662.5 603 64.2
THA.LOC104802592 Tarenaya hassleriana HOM05D004772 ORTHO05D006892 1.1e-187 660.6 659 58.6
Manes.03G200000 Manihot esculenta HOM05D004772 ORTHO05D006892 3.3e-187 659.1 660 59.1
Aqoxy5G00804 Aquilegia oxysepala HOM05D004772 ORTHO05D006892 2.2e-186 656.4 672 57.7
Lj6A683G52 Lonicera japonica HOM05D004772 ORTHO05D006892 6.3e-186 654.8 667 57.7
ECA240G4356 Erigeron canadensis HOM05D004772 ORTHO05D006892 8.2e-186 654.4 631 57.8
HanXRQChr03g0085471 Helianthus annuus HOM05D004772 ORTHO05D006892 4.1e-185 652.1 571 61.3
Sc19g0003370 Simmondsia chinensis HOM05D004772 ORTHO05D006892 4.1e-185 652.1 667 56.5
Thhalv10020259m.g Eutrema salsugineum HOM05D004772 ORTHO05D006892 5.9e-184 648.3 632 57.3
Lsat_1_v5_gn_6_76160 Lactuca sativa HOM05D004772 ORTHO05D006892 3.8e-183 645.6 673 56.5
BcaB06g25777 Brassica carinata HOM05D004772 ORTHO05D006892 1.4e-182 643.7 637 57.3
arahy.Tifrunner.gnm1.ann1.0U01EG Arachis hypogaea HOM05D004772 ORTHO05D006892 1.6e-181 640.2 647 57.5
BolC5t33706H Brassica oleracea HOM05D004772 ORTHO05D006892 1.0e-180 637.5 641 56.3
C05p49530 Brassica napus HOM05D004772 ORTHO05D006892 1.4e-180 637.1 641 56.3
Carub.0003s1652 Capsella rubella HOM05D004772 ORTHO05D006892 5.2e-180 635.2 640 56.1
BcaC05g28847 Brassica carinata HOM05D004772 ORTHO05D006892 1.5e-179 633.6 641 56.2
Sp3g15060 Schrenkiella parvula HOM05D004772 ORTHO05D006892 1.5e-179 633.6 649 55.6
CAN.G14.7 Capsicum annuum HOM05D004772 ORTHO05D006892 2.8e-178 629.4 574 60.1
AUR62016163 Chenopodium quinoa HOM05D004772 ORTHO05D006892 2.4e-177 626.3 613 59.1
Solyc01g065580.4 Solanum lycopersicum HOM05D004772 ORTHO05D006892 3.1e-177 625.9 615 57.4
Sopen01g026980 Solanum pennellii HOM05D004772 ORTHO05D006892 9.1e-177 624.4 634 56.9
MBI18_g04559_MAGBIO Magnolia biondii HOM05D004772 ORTHO05D006892 1.2e-176 624.0 603 60.7
Hund11943 Selenicereus undatus HOM05D004772 ORTHO05D006892 1.2e-176 624.0 605 57.4
Aa31LG8G3880 Aethionema arabicum HOM05D004772 ORTHO05D006892 3.5e-176 622.5 648 54.6
A05p32820 Brassica napus HOM05D004772 ORTHO05D006892 5.9e-176 621.7 640 55.3
MSTRG.24809 Avicennia marina HOM05D004772 ORTHO05D006892 1.0e-175 620.9 653 55.0
BraA05t22104Z Brassica rapa HOM05D004772 ORTHO05D006892 1.3e-175 620.5 652 55.2
AL3G29730 Arabidopsis lyrata HOM05D004772 ORTHO05D006892 6.5e-175 618.2 651 55.0
Nitab4.5_0007304g0010 Nicotiana tabacum HOM05D004772 ORTHO05D006892 8.5e-175 617.8 642 56.7
PGSC0003DMG400001190 Solanum tuberosum HOM05D004772 ORTHO05D006892 2.5e-174 616.3 627 57.1
AUR62035077 Chenopodium quinoa HOM05D004772 ORTHO05D006892 1.8e-172 610.1 637 56.4
CSS0008369 Camellia sinensis var. sinensis HOM05D004772 ORTHO05D006892 3.0e-172 609.4 612 58.8
AT3G16810 Arabidopsis thaliana HOM05D004772 ORTHO05D006892 4.0e-172 609.0 629 54.4
Migut.N00065 Erythranthe guttata HOM05D004772 ORTHO05D006892 2.4e-169 599.7 652 53.4
SGA_v2.0_scaffold119G32697 Striga asiatica HOM05D004772 ORTHO05D006892 3.1e-169 599.4 648 54.5
Peaxi162Scf00065g01018 Petunia axillaris HOM05D004772 ORTHO05D006892 1.0e-167 594.3 654 54.3
SalBow5G3355 Salvia bowleyana HOM05D004772 ORTHO05D006892 3.0e-164 582.8 614 55.9
CDE02G0409 Ceratophyllum demersum HOM05D004772 ORTHO05D006892 4.0e-164 582.4 626 53.7
Oeu054008.1 Olea europaea HOM05D004772 ORTHO05D006892 6.8e-164 581.6 546 59.2
CSS0024712 Camellia sinensis var. sinensis HOM05D004772 ORTHO05D006892 3.4e-163 579.3 582 59.8
ATR0693G185 Amborella trichopoda HOM05D004772 ORTHO05D006892 4.8e-162 575.5 643 53.2
EL10Ac3g04940 Beta vulgaris HOM05D004772 ORTHO05D006892 4.1e-161 572.4 614 55.4
vmacro08098 Vaccinium macrocarpon HOM05D004772 ORTHO05D006892 2.1e-157 560.1 601 57.2
COL.COLO4_34697 Corchorus olitorius HOM05D004772 ORTHO05D006892 6.1e-157 558.5 665 53.2
Nitab4.5_0000361g0050 Nicotiana tabacum HOM05D004772 ORTHO05D006892 2.3e-156 556.6 510 59.6
Psat4g024680 Pisum sativum HOM05D004772 ORTHO05D006892 5.7e-155 552.0 632 51.4
CARHR092060 Cardamine hirsuta HOM05D004772 ORTHO05D006892 7.5e-155 551.6 641 51.8
Os03g0831100 Oryza sativa ssp. japonica HOM05D004772 ORTHO05D006892 8.9e-140 501.5 665 45.7
Hma1.2p1_0078F.1_g040270 Hydrangea macrophylla HOM05D004772 ORTHO05D006892 3.5e-128 463.0 450 61.3
SMO367G0742 Selaginella moellendorffii HOM05D004772 ORTHO05D006892 3.3e-118 429.9 579 44.2
HPP92_010664 Vanilla planifolia HOM05D004772 ORTHO05D006892 1.6e-112 411.0 623 44.1
CAN.G1132.3 Capsicum annuum HOM05D004772 ORTHO05D006892 1.5e-107 394.4 277 72.2
Pp3c5_10580 Physcomitrium patens HOM05D004772 ORTHO05D006892 5.8e-107 392.5 616 41.6
Mapoly0099s0044 Marchantia polymorpha HOM05D004772 ORTHO05D006892 7.4e-102 375.6 664 38.0
Oeu006429.1 Olea europaea HOM05D004772 ORTHO05D006892 2.1e-101 374.0 495 46.9
AagrBONN_evm.TU.Sc2ySwM_344.4680 Anthoceros agrestis HOM05D004772 ORTHO05D006892 2.1e-96 357.5 690 37.2
unitig_747.g21102 Utricularia gibba HOM05D004772 ORTHO05D006892 5.1e-95 352.8 604 41.1
Psat5g033800 Pisum sativum HOM05D004772 ORTHO05D006892 4.3e-94 349.7 299 64.2
SHI00201 Sapria himalayana HOM05D004772 ORTHO05D006892 4.3e-94 349.7 384 55.5
AUR62015585 Chenopodium quinoa HOM05D004772 ORTHO05D006892 1.6e-88 331.3 393 50.6
CDE09G0311 Ceratophyllum demersum HOM05D004772 ORTHO05D006892 1.5e-86 324.7 253 67.6
FAN17G1707 Fragaria x ananassa HOM05D004772 ORTHO05D006892 1.2e-80 305.1 245 64.9
Zm00001eb063600 Zea mays HOM05D004772 ORTHO05D006892 1.4e-76 291.6 310 51.6
CBR_g50950 Chara braunii HOM05D004772 ORTHO05D006892 1.8e-76 291.2 643 32.8
CDE09G1302 Ceratophyllum demersum HOM05D004772 ORTHO05D006892 1.4e-63 248.4 252 54.8
Hma1.2p1_0078F.1_g040290 Hydrangea macrophylla HOM05D004772 ORTHO05D006892 1.2e-51 208.8 158 67.1
C09p33250 Brassica napus HOM05D004772 ORTHO05D006892 1.5e-49 201.8 249 48.6
BolC5t30856H Brassica oleracea HOM05D004772 ORTHO05D006892 7.2e-49 199.5 249 49.0
AL769U10010 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.2e-48 198.7 222 53.6
BolC9t56162H Brassica oleracea HOM05D004772 ORTHO05D006892 1.5e-41 175.3 249 43.8
C05p21600 Brassica napus HOM05D004772 ORTHO05D006892 1.2e-40 172.2 249 43.8
Lalb_Chr12g0201101 Lupinus albus HOM05D004772 ORTHO05D006892 5.2e-39 166.8 177 54.8
Lalb_Chr12g0201121 Lupinus albus HOM05D004772 ORTHO05D006892 1.2e-38 165.6 111 71.2
Cre12.g528950 Chlamydomonas reinhardtii HOM05D004772 ORTHO05D006892 1.5e-38 165.2 706 23.5
MCO02G008 Micromonas commoda HOM05D004772 ORTHO05D006892 1.3e-37 162.2 334 30.5
Glyma.08G191100 Glycine max HOM05D004772 ORTHO05D006892 2.9e-34 151.0 99 75.8
SGA_v2.0_scaffold119G32683 Striga asiatica HOM05D000890 ORTHO05D000697 3.3e-33 147.5 138 53.6
BcaC05g26176 Brassica carinata HOM05D004772 ORTHO05D006892 7.8e-27 126.3 236 36.0
Actinidia40307 Actinidia chinensis HOM05D004772 ORTHO05D006892 6.6e-26 123.2 536 28.5
PRCOL_00000476 Prasinoderma coloniale HOM05D004772 ORTHO05D006892 1.9e-25 121.7 267 31.5
SEGI_16207 Sequoiadendron giganteum HOM05D004772 ORTHO05D006892 1.4e-23 115.5 103 55.3
Lalb_Chr12g0201111 Lupinus albus HOM05D004772 ORTHO05D020841 3.1e-23 114.4 89 68.5
SGA_v2.0_scaffold594G53106 Striga asiatica HOM05D004772 ORTHO05D006892 2.9e-21 107.8 75 64.0
BcaC04g21315 Brassica carinata HOM05D004772 ORTHO05D006892 1.1e-17 95.9 163 41.1
Psat1g126160 Pisum sativum HOM05D004772 ORTHO05D009869 2.5e-17 94.7 77 68.8
Zm00001eb103930 Zea mays HOM05D004772 ORTHO05D020841 5.2e-15 87.0 142 37.3
Zm00001eb246110 Zea mays HOM05D004772 ORTHO05D020841 5.2e-15 87.0 142 37.3
Zm00001eb258700 Zea mays HOM05D004772 ORTHO05D020841 5.2e-15 87.0 142 37.3
Nn4g25712 Nelumbo nucifera HOM05D004772 ORTHO05D006892 8.9e-15 86.3 120 44.2
Zm00001eb103920 Zea mays HOM05D004772 ORTHO05D020841 1.2e-14 85.9 142 36.6
Zm00001eb355950 Zea mays HOM05D004772 ORTHO05D020841 1.2e-14 85.9 142 36.6
Zm00001eb160280 Zea mays HOM05D004772 ORTHO05D020841 1.5e-14 85.5 142 36.6
Zm00001eb253290 Zea mays HOM05D004772 ORTHO05D037858 1.5e-14 85.5 81 56.8
BcaC01g03298 Brassica carinata HOM05D003366 ORTHO05D004045 2.0e-14 85.1 99 54.5
Medtr4g120460 Medicago truncatula HOM05D004772 ORTHO05D032275 6.0e-11 73.6 44 75.0
BcaB04g18910 Brassica carinata HOM05D004772 ORTHO05D032275 7.8e-11 73.2 45 68.9
SalBow1G8756 Salvia bowleyana HOM05D004772 ORTHO05D006892 9.5e-09 66.2 135 36.3
A09p56420 Brassica napus HOM05D004772 ORTHO05D042523 1.4e-07 62.4 53 52.8
BraA09t41036Z Brassica rapa HOM05D004772 ORTHO05D042523 1.4e-07 62.4 53 52.8
Psat1g126080 Pisum sativum HOM05D004772 ORTHO05D032275 2.6e-06 58.2 38 68.4
Os12g0574400 Oryza sativa ssp. japonica HOM05D000810 ORTHO05D014916 9.9e-06 56.2 119 26.9


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