Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.16G107100 Carya illinoinensis HOM05D005762 ORTHO05D006823 2.2e-92 342.4 193 100.0
Prupe.7G266400 Prunus persica HOM05D005762 ORTHO05D006823 4.6e-74 281.6 191 77.0
ClCG06G012630 Citrullus lanatus HOM05D005762 ORTHO05D006823 7.9e-74 280.8 191 79.1
QL02p094110 Quercus lobata HOM05D005762 ORTHO05D006823 3.1e-70 268.9 191 81.7
Gorai.008G090500 Gossypium raimondii HOM05D005762 ORTHO05D006823 5.3e-70 268.1 191 73.8
Thecc.01G095900 Theobroma cacao HOM05D005762 ORTHO05D006823 1.5e-69 266.5 191 74.3
Sed0006648 Sechium edule HOM05D005762 ORTHO05D006823 2.0e-69 266.2 192 77.1
Lalb_Chr16g0380631 Lupinus albus HOM05D005762 ORTHO05D006823 5.9e-69 264.6 194 75.8
Duzib147G0575 Durio zibethinus HOM05D005762 ORTHO05D006823 1.3e-68 263.5 191 72.8
MELO3C010201.2 Cucumis melo HOM05D005762 ORTHO05D006823 3.8e-68 261.9 191 76.4
Atru.chr7.1163 Acer truncatum HOM05D005762 ORTHO05D006823 5.0e-68 261.5 191 73.8
Sed0007428 Sechium edule HOM05D005762 ORTHO05D006823 8.5e-68 260.8 191 74.3
COL.COLO4_27292 Corchorus olitorius HOM05D005762 ORTHO05D006823 1.1e-67 260.4 191 71.7
GSVIVG01023684001 Vitis vinifera HOM05D005762 ORTHO05D006823 1.1e-67 260.4 191 76.4
Gohir.D12G082500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 1.4e-67 260.0 191 72.8
Eucgr.C02513 Eucalyptus grandis HOM05D005762 ORTHO05D006823 9.4e-67 257.3 191 73.3
Eucgr.L01546 Eucalyptus grandis HOM05D005762 ORTHO05D006823 9.4e-67 257.3 191 73.3
Glyma.19G036900 Glycine max HOM05D005762 ORTHO05D006823 4.7e-66 255.0 191 73.8
arahy.Tifrunner.gnm1.ann1.0D8FTQ Arachis hypogaea HOM05D005762 ORTHO05D006823 1.0e-65 253.8 192 71.9
Gohir.A12G083500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 1.8e-65 253.1 191 72.8
Phvul.004G044600 Phaseolus vulgaris HOM05D005762 ORTHO05D006823 2.3e-65 252.7 191 70.2
TAR625G0504 Trochodendron aralioides HOM05D005762 ORTHO05D006823 5.1e-65 251.5 194 70.6
TWI34G1522 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 6.7e-65 251.1 191 71.2
arahy.Tifrunner.gnm1.ann1.3SV7H4 Arachis hypogaea HOM05D005762 ORTHO05D006823 1.5e-64 250.0 192 70.8
TWI63G0575 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 5.7e-64 248.1 189 69.8
PGR102G1062 Punica granatum HOM05D005762 ORTHO05D006823 9.7e-64 247.3 191 77.0
FvH4_1g00560 Fragaria vesca HOM05D005762 ORTHO05D006823 4.8e-63 245.0 191 76.4
Lalb_Chr05g0215351 Lupinus albus HOM05D005762 ORTHO05D006823 6.3e-63 244.6 192 72.4
Manes.14G112900 Manihot esculenta HOM05D005762 ORTHO05D006823 1.1e-62 243.8 191 72.3
Haze_19144 Corylus avellana HOM05D005762 ORTHO05D006823 5.3e-62 241.5 187 70.6
Lj2g0011355 Lotus japonicus HOM05D005762 ORTHO05D006823 7.0e-62 241.1 191 70.7
Dinv42823 Davidia involucrata HOM05D005762 ORTHO05D006823 4.5e-61 238.4 191 69.6
Dinv43277 Davidia involucrata HOM05D005762 ORTHO05D006823 4.5e-61 238.4 191 69.6
Aqoxy6G02656 Aquilegia oxysepala HOM05D005762 ORTHO05D006823 1.7e-60 236.5 194 67.5
VMungo1215G2009 Vigna mungo HOM05D005762 ORTHO05D006823 2.9e-60 235.7 241 57.3
FAN26G0640 Fragaria x ananassa HOM05D005762 ORTHO05D006823 3.8e-60 235.3 191 74.3
Cpa.g.sc199.22 Carica papaya HOM05D005762 ORTHO05D006823 1.1e-59 233.8 176 80.1
Ciclev10009604m.g Citrus clementina HOM05D005762 ORTHO05D006823 1.1e-59 233.8 192 69.8
Hma1.2p1_0222F.1_g093870 Hydrangea macrophylla HOM05D005762 ORTHO05D006823 1.9e-59 233.0 191 68.1
RcHm_v2.0_Chr2g0085191 Rosa chinensis HOM05D005762 ORTHO05D006823 2.1e-58 229.6 191 73.8
MD15G1148500 Malus domestica HOM05D005762 ORTHO05D006823 8.0e-58 227.6 200 64.5
Nn8g40046 Nelumbo nucifera HOM05D005762 ORTHO05D006823 8.0e-58 227.6 183 71.6
Sopen04g027270 Solanum pennellii HOM05D005762 ORTHO05D006823 1.4e-57 226.9 193 65.3
PGSC0003DMG400024111 Solanum tuberosum HOM05D005762 ORTHO05D006823 1.8e-57 226.5 193 65.3
Ca_04188_v3 Cicer arietinum L. HOM05D005762 ORTHO05D006823 3.9e-57 225.3 191 71.7
TPR.G14135 Trifolium pratense HOM05D005762 ORTHO05D006823 3.9e-57 225.3 191 73.3
Solyc04g071310.3 Solanum lycopersicum HOM05D005762 ORTHO05D006823 6.7e-57 224.6 193 64.8
Medtr6g006900 Medicago truncatula HOM05D005762 ORTHO05D006823 8.8e-57 224.2 191 72.8
Rhsim01G0024500 Rhododendron simsii HOM05D005762 ORTHO05D006823 1.1e-56 223.8 188 68.1
Psat1g057520 Pisum sativum HOM05D005762 ORTHO05D006823 1.5e-56 223.4 191 65.4
Nitab4.5_0000032g0060 Nicotiana tabacum HOM05D005762 ORTHO05D006823 4.4e-56 221.9 193 64.8
Cc00_g06610 Coffea canephora HOM05D005762 ORTHO05D006823 1.3e-55 220.3 194 68.0
DCAR_014801 Daucus carota HOM05D005762 ORTHO05D006823 1.7e-55 219.9 191 63.9
Lsat_1_v5_gn_7_49601 Lactuca sativa HOM05D005762 ORTHO05D006823 2.8e-55 219.2 194 64.9
PSO761G0310 Papaver somniferum HOM05D005762 ORTHO05D006823 1.1e-54 217.2 195 66.7
Peaxi162Scf00765g00313 Petunia axillaris HOM05D005762 ORTHO05D006823 2.4e-54 216.1 194 64.4
Actinidia24370 Actinidia chinensis HOM05D000058 ORTHO05D000077 1.6e-53 213.4 194 68.0
MBI02_g32399_MAGBIO Magnolia biondii HOM05D005762 ORTHO05D006823 1.6e-53 213.4 197 62.9
CANSAT11G0529 Cannabis sativa HOM05D005762 ORTHO05D006823 2.0e-53 213.0 192 70.8
CAN.G268.6 Capsicum annuum HOM05D005762 ORTHO05D006823 2.0e-53 213.0 193 63.7
ATR0767G248 Amborella trichopoda HOM05D005762 ORTHO05D006823 3.5e-53 212.2 195 62.1
HanXRQChr09g0244521 Helianthus annuus HOM05D005762 ORTHO05D006823 1.7e-52 209.9 193 62.7
Potri.006G180900 Populus trichocarpa HOM05D005762 ORTHO05D006823 3.8e-52 208.8 188 62.2
Sabra06G0137900 Salix brachista HOM05D005762 ORTHO05D006823 6.5e-52 208.0 191 61.8
HanXRQChr03g0066031 Helianthus annuus HOM05D005762 ORTHO05D006823 1.1e-51 207.2 194 60.3
Potri.018G103200 Populus trichocarpa HOM05D005762 ORTHO05D006823 1.5e-51 206.8 192 64.6
THA.LOC104814737 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 2.5e-51 206.1 191 60.7
MSTRG.25456 Avicennia marina HOM05D005762 ORTHO05D006823 3.2e-51 205.7 194 62.4
DCAR_019992 Daucus carota HOM05D005762 ORTHO05D006823 3.2e-51 205.7 191 59.7
HPP92_021390 Vanilla planifolia HOM05D005762 ORTHO05D006823 3.2e-51 205.7 198 63.1
CSS0036647 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 2.7e-50 202.6 183 64.5
SalBow7G3475 Salvia bowleyana HOM05D005762 ORTHO05D006823 1.0e-49 200.7 193 60.6
SGA_v2.0_scaffold118G32537 Striga asiatica HOM05D005762 ORTHO05D006823 1.0e-49 200.7 191 60.7
Migut.C01281 Erythranthe guttata HOM05D005762 ORTHO05D006823 4.0e-49 198.7 191 63.4
vmacro06054 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 6.8e-49 198.0 194 65.5
CDE02G2562 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 8.8e-49 197.6 192 59.9
Lj2g0017040 Lotus japonicus HOM05D005762 ORTHO05D006823 3.4e-48 195.7 179 63.1
Sabra18G0088700 Salix brachista HOM05D000058 ORTHO05D000077 7.5e-48 194.5 169 62.1
PSO357G0319 Papaver somniferum HOM05D005762 ORTHO05D006823 2.2e-47 193.0 197 59.4
PSO170G6399 Papaver somniferum HOM05D005762 ORTHO05D006823 3.7e-47 192.2 193 58.0
CDE06G1965 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 8.3e-47 191.0 192 59.4
CSS0014952 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 1.1e-46 190.7 192 59.9
BcaB03g12662 Brassica carinata HOM05D005762 ORTHO05D006823 5.3e-46 188.3 192 57.3
CARHR238660 Cardamine hirsuta HOM05D005762 ORTHO05D006823 5.3e-46 188.3 191 58.6
Sp7g28690 Schrenkiella parvula HOM05D005762 ORTHO05D006823 1.6e-45 186.8 191 54.5
Zm00001eb215170 Zea mays HOM05D005762 ORTHO05D006823 2.9e-44 182.6 187 57.2
Zm00001eb375400 Zea mays HOM05D005762 ORTHO05D006823 2.9e-44 182.6 187 57.2
Os11g0473100 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 1.5e-43 180.3 187 56.7
AT4G30820 Arabidopsis thaliana HOM05D005762 ORTHO05D006823 3.2e-43 179.1 191 54.5
Dinv41344 Davidia involucrata HOM05D005762 ORTHO05D006823 1.6e-42 176.8 146 67.8
unitig_0.g206 Utricularia gibba HOM05D005762 ORTHO05D006823 1.6e-42 176.8 191 56.0
C03p88490 Brassica napus HOM05D005762 ORTHO05D006823 2.7e-42 176.0 192 58.9
Os06g0171700 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 2.7e-42 176.0 200 54.5
BraA08t33867Z Brassica rapa HOM05D005762 ORTHO05D006823 4.7e-42 175.3 192 60.4
unitig_60.g25712 Utricularia gibba HOM05D005762 ORTHO05D006823 8.8e-41 171.0 191 57.1
SEGI_01916 Sequoiadendron giganteum HOM05D005762 ORTHO05D006823 5.7e-40 168.3 191 52.9
Carub.0007s0975 Capsella rubella HOM05D005762 ORTHO05D006823 9.8e-40 167.5 191 53.9
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 1.7e-39 166.8 174 56.3
BcaC01g01136 Brassica carinata HOM05D005762 ORTHO05D006823 1.1e-38 164.1 192 57.8
C07p58230 Brassica napus HOM05D000058 ORTHO05D000077 1.1e-38 164.1 191 53.9
BolC7t46281H Brassica oleracea HOM05D000058 ORTHO05D000077 1.1e-38 164.1 191 53.9
BcaNung01558 Brassica carinata HOM05D005762 ORTHO05D006823 5.4e-38 161.8 203 51.2
BcaNung02738 Brassica carinata HOM05D005762 ORTHO05D006823 7.0e-38 161.4 201 47.3
SHI02837 Sapria himalayana HOM05D005762 ORTHO05D006823 2.7e-37 159.5 195 49.7
SGA_v2.0_scaffold69G23111 Striga asiatica HOM05D005762 ORTHO05D006823 2.7e-37 159.5 212 49.1
Lj9A721G60 Lonicera japonica HOM05D005762 ORTHO05D006823 3.5e-37 159.1 149 62.4
A08p19060 Brassica napus HOM05D005762 ORTHO05D006823 4.5e-37 158.7 220 52.3
A03p60360 Brassica napus HOM05D005762 ORTHO05D006823 8.6e-36 154.5 191 49.7
Mapoly0025s0086 Marchantia polymorpha HOM05D005762 ORTHO05D006823 1.1e-35 154.1 195 46.2
AagrBONN_evm.TU.Sc2ySwM_344.3285 Anthoceros agrestis HOM05D005762 ORTHO05D006823 9.5e-35 151.0 188 45.7
Cfa020788 Carpinus fangiana HOM05D005762 ORTHO05D006823 8.0e-34 147.9 110 73.6
Rhsim03G0259100 Rhododendron simsii HOM05D005762 ORTHO05D006823 1.8e-33 146.7 146 60.3
Sc18g0003110 Simmondsia chinensis HOM05D005762 ORTHO05D006823 1.8e-30 136.7 149 58.4
Pp3c7_18190 Physcomitrium patens HOM05D005762 ORTHO05D006823 3.2e-30 136.0 192 43.8
SMO356G0316 Selaginella moellendorffii HOM05D005762 ORTHO05D006823 7.0e-30 134.8 192 43.8
BraA03t15075Z Brassica rapa HOM05D005762 ORTHO05D006823 2.7e-29 132.9 169 49.7
THA.LOC104804493 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 2.9e-28 129.4 139 55.4
Oeu026957.1 Olea europaea HOM05D005762 ORTHO05D006823 2.1e-26 123.2 118 63.6
vmacro13053 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 3.6e-26 122.5 74 86.5
Thhalv10026542m.g Eutrema salsugineum HOM05D005762 ORTHO05D006823 6.1e-26 121.7 146 53.4
AL7G21310 Arabidopsis lyrata HOM05D005762 ORTHO05D006823 3.1e-25 119.4 147 51.7
CBR_g45648 Chara braunii HOM05D005762 ORTHO05D006823 4.0e-25 119.0 207 40.6
AUR62025367 Chenopodium quinoa HOM05D005762 ORTHO05D006823 4.0e-25 119.0 82 75.6
EL10Ac8g18914 Beta vulgaris HOM05D005762 ORTHO05D006823 6.8e-25 118.2 82 75.6
AUR62028383 Chenopodium quinoa HOM05D005762 ORTHO05D006823 8.9e-25 117.9 82 74.4
BolC3t21157H Brassica oleracea HOM05D005762 ORTHO05D006823 4.4e-24 115.5 157 52.2
CsaV3_1G029180 Cucumis sativus L. HOM05D005762 ORTHO05D006823 1.2e-21 107.5 77 75.3
CBR_g3032 Chara braunii HOM05D005762 ORTHO05D006823 6.0e-21 105.1 89 60.7
Rhsim01G0060600 Rhododendron simsii HOM05D005762 ORTHO05D006823 3.6e-18 95.9 103 61.2
Dinv09756 Davidia involucrata HOM05D000667 ORTHO05D002614 6.2e-18 95.1 88 60.2
SGA_v2.0_scaffold63G21769 Striga asiatica HOM05D005762 ORTHO05D006823 3.1e-17 92.8 78 66.7
SMO004G0001 Selaginella moellendorffii HOM05D028982 ORTHO05D006823 8.9e-17 91.3 74 59.5
PSO357G0231 Papaver somniferum HOM05D005762 ORTHO05D006823 1.3e-15 87.4 137 44.5
vmacro13054 Vaccinium macrocarpon HOM05D006258 ORTHO05D007961 8.3e-15 84.7 84 56.0
MCO02G015 Micromonas commoda HOM05D005762 ORTHO05D006823 1.0e-12 77.8 96 47.9
Nitab4.5_0008759g0010 Nicotiana tabacum HOM05D005762 ORTHO05D006823 1.7e-12 77.0 84 50.0
Oeu064081.1 Olea europaea HOM05D005762 ORTHO05D006823 3.9e-12 75.9 57 75.4
CiPaw.15G164900 Carya illinoinensis HOM05D005762 ORTHO05D006823 1.6e-10 70.5 90 50.0
Cre16.g672753 Chlamydomonas reinhardtii HOM05D005762 ORTHO05D006823 2.3e-09 66.6 181 29.8
Aa31LG2G19570 Aethionema arabicum HOM05D005762 ORTHO05D006823 8.9e-09 64.7 85 47.1
MD02G1004700 Malus domestica HOM05D005762 ORTHO05D006823 2.6e-08 63.2 44 65.9
Actinidia26604 Actinidia chinensis HOM05D005762 ORTHO05D006823 1.9e-06 57.0 76 50.0


User provided reference genes

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