Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 3.6e-244 847.8 425 100.0
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 7.8e-215 750.4 425 87.5
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 6.8e-211 737.3 426 86.6
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 3.0e-206 721.8 429 83.7
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 4.0e-203 711.4 431 82.8
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 3.4e-202 708.4 429 82.3
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 4.4e-202 708.0 429 82.1
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 1.3e-201 706.4 429 82.3
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 9.2e-200 700.3 429 81.1
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 4.6e-199 698.0 424 81.1
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 1.3e-198 696.4 428 81.3
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 1.5e-197 693.0 419 82.8
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 4.3e-197 691.4 431 79.8
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 4.3e-197 691.4 428 80.1
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 9.5e-197 690.3 430 80.0
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 3.1e-195 685.3 430 79.1
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 6.8e-195 684.1 429 79.3
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 6.8e-195 684.1 430 78.8
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 8.9e-195 683.7 419 81.4
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 1.2e-194 683.3 440 77.5
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 1.5e-194 682.9 440 77.5
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 4.4e-194 681.4 430 79.5
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 2.9e-193 678.7 459 74.7
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 1.4e-192 676.4 434 78.6
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 4.1e-192 674.9 428 78.5
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 7.1e-192 674.1 429 77.6
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 1.2e-191 673.3 457 75.9
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 1.6e-191 672.9 428 78.3
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 3.5e-191 671.8 427 78.5
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 1.0e-190 670.2 428 77.8
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 8.7e-190 667.2 419 78.0
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 1.9e-189 666.0 419 79.0
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 2.5e-189 665.6 427 77.8
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 1.2e-188 663.3 430 75.8
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 4.7e-188 661.4 427 77.8
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 6.9e-187 657.5 426 76.8
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 1.3e-185 653.3 427 77.0
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 2.2e-185 652.5 431 74.9
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 2.2e-185 652.5 428 75.5
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 2.9e-185 652.1 413 77.7
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 4.9e-185 651.4 423 76.6
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 4.9e-185 651.4 423 76.6
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 8.4e-185 650.6 427 76.3
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 3.2e-184 648.7 426 75.1
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 1.2e-183 646.7 420 76.4
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 7.8e-183 644.0 424 75.9
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 1.3e-182 643.3 420 75.2
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 2.3e-182 642.5 427 75.4
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 5.1e-182 641.3 428 74.5
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 6.6e-182 641.0 420 75.7
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 1.9e-181 639.4 420 75.7
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 2.4e-179 632.5 431 72.4
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 2.4e-179 632.5 419 74.7
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 2.0e-178 629.4 548 63.3
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 2.6e-178 629.0 431 71.7
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 2.6e-178 629.0 448 71.4
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 3.4e-178 628.6 419 74.0
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 7.6e-178 627.5 443 70.9
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 9.9e-178 627.1 424 72.6
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 9.9e-178 627.1 424 72.6
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 1.3e-177 626.7 420 73.8
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 2.2e-177 625.9 421 74.1
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 3.8e-177 625.2 420 73.6
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 8.4e-177 624.0 420 73.3
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 5.4e-176 621.3 430 71.6
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 7.1e-176 620.9 420 72.9
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 7.1e-176 620.9 430 71.6
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 9.3e-176 620.5 433 72.3
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 1.6e-175 619.8 421 73.9
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 7.9e-175 617.5 421 73.6
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 1.0e-174 617.1 428 73.6
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 1.3e-174 616.7 419 72.8
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 6.7e-174 614.4 423 73.8
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 5.6e-173 611.3 421 72.4
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 5.6e-173 611.3 434 69.8
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 5.6e-173 611.3 419 69.7
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 9.6e-173 610.5 421 73.2
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 9.6e-173 610.5 421 73.2
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 1.3e-172 610.1 421 73.2
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 1.3e-172 610.1 421 71.3
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 1.6e-172 609.8 421 73.2
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 1.6e-172 609.8 421 72.9
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 2.1e-172 609.4 433 69.7
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 6.2e-172 607.8 420 72.1
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.1e-171 607.1 423 72.8
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.4e-171 606.7 423 72.8
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 5.3e-171 604.7 434 69.4
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 6.9e-171 604.4 423 72.6
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 1.2e-170 603.6 420 70.7
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 1.5e-170 603.2 419 69.9
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 1.3e-169 600.1 419 71.4
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 2.2e-169 599.4 418 73.2
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 2.7e-167 592.4 467 64.5
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 3.9e-166 588.6 419 69.0
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 1.3e-164 583.6 420 69.8
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 1.1e-163 580.5 419 67.5
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 2.2e-161 572.8 419 68.5
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 2.9e-161 572.4 419 66.8
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 1.9e-157 559.7 335 84.2
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 5.7e-157 558.1 416 66.8
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 3.1e-155 552.4 423 62.4
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 5.7e-149 531.6 423 61.7
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 4.7e-143 511.9 356 71.6
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 2.6e-141 506.1 428 56.8
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 4.8e-140 501.9 430 59.3
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 1.1e-139 500.7 426 61.3
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 1.7e-137 493.4 429 61.1
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 3.9e-134 482.3 432 54.2
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 1.3e-132 477.2 426 55.4
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 4.1e-131 472.2 434 60.6
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 8.5e-129 464.5 298 76.8
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 9.4e-128 461.1 351 67.5
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 9.1e-123 444.5 273 81.3
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 1.6e-122 443.7 428 49.8
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 1.2e-114 417.5 255 81.6
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 1.6e-114 417.2 420 55.0
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 1.7e-89 334.0 196 83.7
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 2.0e-85 320.5 417 44.1
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 7.6e-77 292.0 234 59.4
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 4.0e-70 269.6 184 74.5
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 8.4e-68 261.9 292 52.1
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 3.7e-55 219.9 138 80.4
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 1.1e-32 145.2 90 73.3
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 2.5e-32 144.1 89 74.2
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 3.1e-30 137.1 89 73.0
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 2.3e-25 120.9 85 65.9
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 7.0e-14 82.8 364 24.2
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 4.2e-11 73.6 90 46.7
CSS0028086 Camellia sinensis var. sinensis HOM05D001336 ORTHO05D001211 8.8e-09 65.9 41 70.7


User provided reference genes

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