Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G124600 Carya illinoinensis HOM05D000215 ORTHO05D128436 7.6e-124 447.2 230 100.0
CiPaw.09G219100 Carya illinoinensis HOM05D000215 ORTHO05D002239 6.4e-22 108.6 98 69.4
Haze_21155 Corylus avellana HOM05D000215 ORTHO05D002239 2.4e-16 90.1 96 56.2
Cfa017058 Carpinus fangiana HOM05D000215 ORTHO05D002239 2.2e-14 83.6 96 53.1
QL07p032599 Quercus lobata HOM05D000215 ORTHO05D002239 2.4e-13 80.1 96 53.1
GSVIVG01030205001 Vitis vinifera HOM05D000215 ORTHO05D002239 2.7e-12 76.6 96 50.0
CANSAT35G0758 Cannabis sativa HOM05D000215 ORTHO05D002239 7.9e-12 75.1 124 41.1
Duzib151G1209 Durio zibethinus HOM05D000215 ORTHO05D002239 1.0e-11 74.7 97 50.5
Dinv25323 Davidia involucrata HOM05D000215 ORTHO05D002239 5.1e-11 72.4 97 45.4
Gohir.A02G004300 Gossypium hirsutum HOM05D000215 ORTHO05D002239 5.1e-11 72.4 96 47.9
Gorai.005G005300 Gossypium raimondii HOM05D000215 ORTHO05D002239 6.7e-11 72.0 96 47.9
Gohir.D02G004700 Gossypium hirsutum HOM05D000215 ORTHO05D002239 1.1e-10 71.2 96 47.9
Rhsim05G0229300 Rhododendron simsii HOM05D000215 ORTHO05D002239 1.1e-10 71.2 96 43.8
TWI74G1010 Tripterygium wilfordii HOM05D000215 ORTHO05D002239 1.5e-10 70.9 144 36.1
CsaV3_4G027070 Cucumis sativus L. HOM05D000215 ORTHO05D002239 2.5e-10 70.1 96 45.8
Dinv11383 Davidia involucrata HOM05D000215 ORTHO05D002239 2.5e-10 70.1 96 44.8
Ciclev10011217m.g Citrus clementina HOM05D000215 ORTHO05D002239 4.3e-10 69.3 96 43.8
Potri.006G107600 Populus trichocarpa HOM05D000215 ORTHO05D002239 5.6e-10 68.9 96 49.0
Actinidia29045 Actinidia chinensis HOM05D000215 ORTHO05D002239 7.4e-10 68.6 96 44.8
Hma1.2p1_1052F.1_g252330 Hydrangea macrophylla HOM05D000215 ORTHO05D002239 7.4e-10 68.6 125 37.6
Cpa.g.sc86.33 Carica papaya HOM05D000215 ORTHO05D002239 9.6e-10 68.2 96 44.8
Oeu024008.1 Olea europaea HOM05D000215 ORTHO05D002239 1.3e-09 67.8 96 43.8
Oeu057995.1 Olea europaea HOM05D000215 ORTHO05D002239 1.3e-09 67.8 96 43.8
SalBow5G2526 Salvia bowleyana HOM05D000215 ORTHO05D002239 1.3e-09 67.8 96 40.6
Potri.016G134000 Populus trichocarpa HOM05D000215 ORTHO05D002239 2.1e-09 67.0 91 48.4
Prupe.6G290800 Prunus persica HOM05D000215 ORTHO05D002239 2.1e-09 67.0 96 44.8
Sabra06G0083700 Salix brachista HOM05D000215 ORTHO05D002239 3.7e-09 66.2 69 59.4
MELO3C025205.2 Cucumis melo HOM05D000215 ORTHO05D002239 6.2e-09 65.5 96 44.8
Sabra04G0151600 Salix brachista HOM05D000215 ORTHO05D002239 8.1e-09 65.1 91 48.4
FvH4_5g29050 Fragaria vesca HOM05D000215 ORTHO05D002239 1.1e-08 64.7 96 43.8
FAN18G3799 Fragaria x ananassa HOM05D000215 ORTHO05D002239 1.1e-08 64.7 96 43.8
MSTRG.5513 Avicennia marina HOM05D000215 ORTHO05D002239 1.8e-08 63.9 96 41.7
Manes.09G116300 Manihot esculenta HOM05D000215 ORTHO05D002239 2.4e-08 63.5 131 38.2
Aqoxy4G02365 Aquilegia oxysepala HOM05D000215 ORTHO05D002239 3.1e-08 63.2 91 46.2
CSS0011726 Camellia sinensis var. sinensis HOM05D000215 ORTHO05D002239 4.0e-08 62.8 96 40.6
CSS0023975 Camellia sinensis var. sinensis HOM05D000215 ORTHO05D002239 4.0e-08 62.8 96 40.6
Nn2g10344 Nelumbo nucifera HOM05D000215 ORTHO05D002239 4.0e-08 62.8 96 42.7
Eucgr.K01275 Eucalyptus grandis HOM05D000215 ORTHO05D002239 5.3e-08 62.4 96 41.7
FAN08G1132 Fragaria x ananassa HOM05D000215 ORTHO05D002239 5.3e-08 62.4 96 42.7
FAN13G0611 Fragaria x ananassa HOM05D000215 ORTHO05D002239 5.3e-08 62.4 96 42.7
Peaxi162Scf00732g00425 Petunia axillaris HOM05D000215 ORTHO05D002239 5.3e-08 62.4 118 37.3
Solyc09g018230.1 Solanum lycopersicum HOM05D000215 ORTHO05D002239 6.9e-08 62.0 108 38.9
Sopen09g010990 Solanum pennellii HOM05D000215 ORTHO05D002239 6.9e-08 62.0 108 38.9
PGSC0003DMG400027759 Solanum tuberosum HOM05D000215 ORTHO05D002239 9.0e-08 61.6 109 38.5
Migut.J00059 Erythranthe guttata HOM05D000215 ORTHO05D002239 1.2e-07 61.2 96 40.6
RcHm_v2.0_Chr3g0460861 Rosa chinensis HOM05D000215 ORTHO05D002239 1.2e-07 61.2 92 43.5
Nitab4.5_0003064g0010 Nicotiana tabacum HOM05D000215 ORTHO05D002239 1.5e-07 60.8 103 38.8
CSS0030349 Camellia sinensis var. sinensis HOM05D000215 ORTHO05D002239 2.0e-07 60.5 125 33.6
PGR004G2249 Punica granatum HOM05D000215 ORTHO05D002239 2.0e-07 60.5 96 39.6
PSO170G4222 Papaver somniferum HOM05D000215 ORTHO05D002239 3.4e-07 59.7 96 42.7
TWI77G0030 Tripterygium wilfordii HOM05D000215 ORTHO05D002239 3.4e-07 59.7 98 42.9
SGA_v2.0_scaffold85G26647 Striga asiatica HOM05D000215 ORTHO05D002239 4.5e-07 59.3 96 39.6
Gohir.A10G149500 Gossypium hirsutum HOM05D000215 ORTHO05D002239 7.6e-07 58.5 70 50.0
Gohir.D10G117300 Gossypium hirsutum HOM05D000215 ORTHO05D002239 7.6e-07 58.5 70 50.0
Lj2C61T5 Lonicera japonica HOM05D000215 ORTHO05D002239 7.6e-07 58.5 96 39.6
CAN.G585.37 Capsicum annuum HOM05D000215 ORTHO05D002239 1.0e-06 58.2 102 39.2
ClCG04G006430 Citrullus lanatus HOM05D000215 ORTHO05D002239 1.0e-06 58.2 96 42.7
EL10Ac7g17067 Beta vulgaris HOM05D000215 ORTHO05D002239 1.3e-06 57.8 97 38.1
Cc06_g00510 Coffea canephora HOM05D000215 ORTHO05D002239 1.3e-06 57.8 108 37.0
Gorai.011G129200 Gossypium raimondii HOM05D000215 ORTHO05D002239 1.3e-06 57.8 70 50.0
Ah.15g090180 Amaranthus hybridus HOM05D000131 ORTHO05D002239 2.2e-06 57.0 105 38.1
Manes.08G173500 Manihot esculenta HOM05D000215 ORTHO05D002239 2.2e-06 57.0 96 42.7
PSO017G6701 Papaver somniferum HOM05D000215 ORTHO05D002239 2.2e-06 57.0 96 41.7
Thhalv10022583m.g Eutrema salsugineum HOM05D000215 ORTHO05D002239 2.9e-06 56.6 70 47.1
AL6G10200 Arabidopsis lyrata HOM05D000215 ORTHO05D002239 8.4e-06 55.1 93 39.8


User provided reference genes

Program Settings