Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G122900 Carya illinoinensis HOM05D006389 ORTHO05D007863 4.7e-285 983.8 474 100.0
Cfa005620 Carpinus fangiana HOM05D006389 ORTHO05D007863 9.8e-243 843.2 472 84.5
QL01p005900 Quercus lobata HOM05D006389 ORTHO05D007863 3.4e-235 818.1 473 82.0
Manes.06G168100 Manihot esculenta HOM05D006389 ORTHO05D007863 1.2e-208 729.9 473 72.5
MD11G1027100 Malus domestica HOM05D006389 ORTHO05D007863 1.9e-198 696.0 472 68.9
Atru.chr3.2543 Acer truncatum HOM05D006389 ORTHO05D007863 1.6e-197 693.0 471 71.1
Prupe.6G021400 Prunus persica HOM05D006389 ORTHO05D007863 2.1e-197 692.6 474 69.6
COL.COLO4_24825 Corchorus olitorius HOM05D006389 ORTHO05D007863 1.8e-196 689.5 474 67.9
RcHm_v2.0_Chr5g0077431 Rosa chinensis HOM05D006389 ORTHO05D007863 4.9e-194 681.4 473 68.7
Potri.001G016800 Populus trichocarpa HOM05D006389 ORTHO05D007863 8.4e-194 680.6 486 68.3
Gorai.006G129600 Gossypium raimondii HOM05D006389 ORTHO05D007863 1.0e-191 673.7 475 68.4
Gohir.D09G111800 Gossypium hirsutum HOM05D006389 ORTHO05D007863 1.9e-190 669.5 475 68.0
Haze_10646 Corylus avellana HOM05D006389 ORTHO05D007863 1.3e-189 666.8 565 61.8
Gohir.A09G115200 Gossypium hirsutum HOM05D006389 ORTHO05D007863 1.5e-187 659.8 475 67.8
CsaV3_1G042620 Cucumis sativus L. HOM05D006389 ORTHO05D007863 2.0e-187 659.4 472 66.5
Glyma.11G130800 Glycine max HOM05D006389 ORTHO05D007863 3.4e-187 658.7 474 66.2
FAN11G1995 Fragaria x ananassa HOM05D006389 ORTHO05D007863 3.8e-186 655.2 474 66.2
TAR623G0704 Trochodendron aralioides HOM05D006389 ORTHO05D007863 3.8e-186 655.2 498 64.5
PSO339G5502 Papaver somniferum HOM05D006389 ORTHO05D007863 5.0e-186 654.8 475 67.2
FvH4_3g43320 Fragaria vesca HOM05D006389 ORTHO05D007863 6.5e-186 654.4 474 66.0
TWI34G0575 Tripterygium wilfordii HOM05D006389 ORTHO05D007863 3.2e-185 652.1 476 64.9
ClCG03G013410 Citrullus lanatus HOM05D006389 ORTHO05D007863 1.8e-183 646.4 475 65.1
arahy.Tifrunner.gnm1.ann1.VM78M6 Arachis hypogaea HOM05D006389 ORTHO05D007863 3.0e-183 645.6 473 66.0
Sed0000566 Sechium edule HOM05D006389 ORTHO05D007863 1.5e-182 643.3 472 65.9
GSVIVG01025317001 Vitis vinifera HOM05D006389 ORTHO05D007863 4.3e-182 641.7 460 67.8
DCAR_023759 Daucus carota HOM05D006389 ORTHO05D007863 1.6e-181 639.8 473 61.7
arahy.Tifrunner.gnm1.ann1.XMKE9J Arachis hypogaea HOM05D006389 ORTHO05D007863 4.1e-180 635.2 473 65.1
Sopen11g021140 Solanum pennellii HOM05D006389 ORTHO05D007863 2.6e-179 632.5 475 63.4
Lalb_Chr03g0026221 Lupinus albus HOM05D006389 ORTHO05D007863 1.0e-178 630.6 473 64.3
Nn7g36087 Nelumbo nucifera HOM05D006389 ORTHO05D007863 2.5e-177 625.9 472 64.2
AUR62019259 Chenopodium quinoa HOM05D006389 ORTHO05D007863 5.1e-175 618.2 482 62.9
CAN.G409.1 Capsicum annuum HOM05D006389 ORTHO05D007863 6.7e-175 617.8 476 63.2
Oeu014062.1 Olea europaea HOM05D006389 ORTHO05D007863 1.5e-174 616.7 469 62.9
Actinidia16300 Actinidia chinensis HOM05D006389 ORTHO05D007863 3.3e-174 615.5 473 63.4
FAN16G0020 Fragaria x ananassa HOM05D006389 ORTHO05D007863 1.3e-173 613.6 487 62.2
Nitab4.5_0003250g0030 Nicotiana tabacum HOM05D006389 ORTHO05D007863 3.1e-172 609.0 456 64.0
VMungo1127G1170 Vigna mungo HOM05D006389 ORTHO05D007863 9.1e-172 607.4 518 57.7
PGR102G3332 Punica granatum HOM05D006389 ORTHO05D007863 2.0e-171 606.3 476 62.0
Sabra01G0011800 Salix brachista HOM05D006389 ORTHO05D007863 4.5e-171 605.1 532 58.6
Cpa.g.sc84.94 Carica papaya HOM05D006389 ORTHO05D007863 2.5e-169 599.4 497 58.6
Phvul.011G057100 Phaseolus vulgaris HOM05D006389 ORTHO05D007863 3.2e-169 599.0 478 61.1
Cc01_g04330 Coffea canephora HOM05D006389 ORTHO05D007863 3.6e-168 595.5 477 60.2
Hund22074 Selenicereus undatus HOM05D006389 ORTHO05D007863 1.0e-167 594.0 473 60.7
Migut.N02297 Erythranthe guttata HOM05D006389 ORTHO05D007863 1.8e-167 593.2 464 59.3
Aqoxy1G00204 Aquilegia oxysepala HOM05D006389 ORTHO05D007863 2.6e-163 579.3 472 59.5
THA.LOC104799096 Tarenaya hassleriana HOM05D006389 ORTHO05D007863 2.9e-162 575.9 474 59.7
Dinv36295 Davidia involucrata HOM05D006389 ORTHO05D007863 2.5e-161 572.8 377 72.9
Lj3g0001596 Lotus japonicus HOM05D006389 ORTHO05D007863 2.1e-160 569.7 472 59.5
Sc16g0011670 Simmondsia chinensis HOM05D006389 ORTHO05D007863 6.3e-157 558.1 387 68.5
Lsat_1_v5_gn_2_101040 Lactuca sativa HOM05D006389 ORTHO05D007863 1.2e-155 553.9 472 59.1
Medtr4g066000 Medicago truncatula HOM05D006389 ORTHO05D007863 3.5e-155 552.4 474 56.8
FAN25G0313 Fragaria x ananassa HOM05D006389 ORTHO05D007863 2.2e-154 549.7 500 56.4
HanXRQChr13g0407081 Helianthus annuus HOM05D006389 ORTHO05D007863 9.4e-153 544.3 482 57.3
Thecc.09G225900 Theobroma cacao HOM05D006389 ORTHO05D007863 8.0e-152 541.2 389 67.1
A03p05690 Brassica napus HOM05D006389 ORTHO05D007863 8.8e-151 537.7 474 55.3
C03p06650 Brassica napus HOM05D006389 ORTHO05D007863 1.8e-148 530.0 475 54.7
Carub.0006s1110 Capsella rubella HOM05D006389 ORTHO05D007863 9.1e-148 527.7 472 54.7
ECA238G3473 Erigeron canadensis HOM05D006389 ORTHO05D007863 9.1e-148 527.7 475 56.4
vmacro04176 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 3.5e-147 525.8 387 66.7
AT5G12920 Arabidopsis thaliana HOM05D006389 ORTHO05D007863 7.7e-147 524.6 474 54.9
CARHR200530 Cardamine hirsuta HOM05D006389 ORTHO05D007863 7.7e-147 524.6 476 54.6
Sp6g31040 Schrenkiella parvula HOM05D006389 ORTHO05D007863 1.3e-146 523.9 472 54.4
AUR62000087 Chenopodium quinoa HOM05D006389 ORTHO05D007863 2.9e-146 522.7 473 56.2
Psat0s3083g0200 Pisum sativum HOM05D006389 ORTHO05D007863 2.9e-146 522.7 474 53.6
BcaB01g05390 Brassica carinata HOM05D006389 ORTHO05D007863 1.2e-144 517.3 475 53.3
SalBow4G3167 Salvia bowleyana HOM05D006389 ORTHO05D007863 4.7e-144 515.4 512 50.4
Aa31LG3G14700 Aethionema arabicum HOM05D006389 ORTHO05D007863 1.8e-143 513.5 474 54.2
AL6G23480 Arabidopsis lyrata HOM05D006389 ORTHO05D007863 1.8e-143 513.5 482 53.1
HanXRQChr14g0453091 Helianthus annuus HOM05D006389 ORTHO05D007863 3.0e-143 512.7 520 52.3
BraA03t09908Z Brassica rapa HOM05D006389 ORTHO05D007863 4.0e-143 512.3 521 50.5
HanXRQChr13g0407091 Helianthus annuus HOM05D006389 ORTHO05D007863 2.2e-141 506.5 480 55.0
BolC3t13171H Brassica oleracea HOM05D006389 ORTHO05D007863 6.3e-141 505.0 515 50.5
SGA_v2.0_scaffold3G01545 Striga asiatica HOM05D006389 ORTHO05D007863 8.3e-141 504.6 489 53.4
COL.COLO4_26371 Corchorus olitorius HOM05D006389 ORTHO05D007863 4.5e-139 498.8 435 58.9
Ah.02g115890 Amaranthus hybridus HOM05D006389 ORTHO05D007863 2.9e-138 496.1 471 52.0
FAN21G1265 Fragaria x ananassa HOM05D002542 ORTHO05D005078 2.9e-138 496.1 387 63.6
TPR.G13666 Trifolium pratense HOM05D006389 ORTHO05D007863 3.8e-138 495.7 480 51.9
MELO3C015208.2 Cucumis melo HOM05D006389 ORTHO05D007863 5.6e-137 491.9 470 54.3
Thhalv10015483m.g Eutrema salsugineum HOM05D006389 ORTHO05D007863 1.2e-136 490.7 464 53.2
Rhsim13G0224700 Rhododendron simsii HOM05D006389 ORTHO05D007863 9.8e-134 481.1 503 51.7
AUR62043581 Chenopodium quinoa HOM05D006389 ORTHO05D007863 1.0e-130 471.1 469 53.3
SalBow4G2322 Salvia bowleyana HOM05D006389 ORTHO05D007863 7.3e-129 464.9 512 47.3
ATR0605G326 Amborella trichopoda HOM05D006389 ORTHO05D007863 9.2e-124 448.0 480 49.8
Zm00001eb245730 Zea mays HOM05D006389 ORTHO05D007863 1.6e-123 447.2 478 50.8
unitig_699.g19125 Utricularia gibba HOM05D006389 ORTHO05D007863 5.4e-116 422.2 329 60.2
CDE06G1860 Ceratophyllum demersum HOM05D006389 ORTHO05D007863 1.6e-115 420.6 331 61.0
Os02g0591600 Oryza sativa ssp. japonica HOM05D006389 ORTHO05D007863 3.0e-114 416.4 481 47.0
HanXRQChr14g0455041 Helianthus annuus HOM05D006389 ORTHO05D007863 9.9e-110 401.4 310 63.2
HPP92_018945 Vanilla planifolia HOM05D006389 ORTHO05D007863 8.7e-106 388.3 480 43.8
Hma1.2p1_0728F.1_g209350 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 6.2e-104 382.1 257 70.4
Solyc11g045510.3 Solanum lycopersicum HOM05D006389 ORTHO05D007863 1.1e-103 381.3 289 64.0
PSO384G2577 Papaver somniferum HOM05D006389 ORTHO05D007863 4.9e-101 372.5 282 64.2
Nitab4.5_0000175g0150 Nicotiana tabacum HOM05D006389 ORTHO05D007863 3.5e-99 366.3 292 62.0
CSS0004435 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 4.0e-95 352.8 294 60.9
Eucgr.B03666 Eucalyptus grandis HOM05D006389 ORTHO05D007863 1.3e-93 347.8 285 57.5
Ca_20580_v3 Cicer arietinum L. HOM05D006389 ORTHO05D007863 1.0e-90 338.2 328 52.4
Pp3c6_27180 Physcomitrium patens HOM05D006389 ORTHO05D007863 2.5e-89 333.6 488 36.7
MSTRG.17573 Avicennia marina HOM05D006389 ORTHO05D007863 3.7e-72 276.6 206 62.1
Mapoly0014s0037 Marchantia polymorpha HOM05D006389 ORTHO05D007863 4.1e-71 273.1 471 33.8
Peaxi162Scf00559g00114 Petunia axillaris HOM05D006389 ORTHO05D007863 4.1e-71 273.1 191 67.0
MBI01_g14331_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 9.4e-68 261.9 156 75.6
Ciclev10016567m.g Citrus clementina HOM05D006389 ORTHO05D007863 1.6e-67 261.2 227 58.6
SHI30505 Sapria himalayana HOM05D006389 ORTHO05D007863 1.0e-66 258.5 186 66.7
Hma1.2p1_0728F.1_g209340 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 5.1e-66 256.1 188 65.4
Ciclev10018279m.g Citrus clementina HOM05D006389 ORTHO05D007863 3.6e-59 233.4 168 64.9
AagrBONN_evm.TU.Sc2ySwM_228.3166 Anthoceros agrestis HOM05D006389 ORTHO05D007863 1.8e-58 231.1 460 33.3
Lj1A361T11 Lonicera japonica HOM05D006389 ORTHO05D007863 4.2e-52 209.9 161 60.2
CBR_g1099 Chara braunii HOM05D000019 ORTHO05D000002 3.7e-40 170.2 350 31.7
Nitab4.5_0000175g0160 Nicotiana tabacum HOM05D006389 ORTHO05D007863 8.5e-37 159.1 130 56.9
HanXRQChr14g0450961 Helianthus annuus HOM05D006389 ORTHO05D007863 1.0e-34 152.1 191 41.9
Peaxi162Scf00185g00310 Petunia axillaris HOM05D006389 ORTHO05D007863 7.2e-28 129.4 133 50.4
CSS0015492 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 8.0e-27 125.9 85 67.1
SHI30507 Sapria himalayana HOM05D006389 ORTHO05D007863 1.7e-24 118.2 91 61.5
vmacro04177 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 6.1e-19 99.8 91 51.6
MCO05G648 Micromonas commoda HOM05D006389 ORTHO05D007863 1.8e-18 98.2 362 26.0
arahy.Tifrunner.gnm1.ann1.RII35Q Arachis hypogaea HOM05D006389 ORTHO05D007863 3.1e-18 97.4 294 26.9
Psat4g014880 Pisum sativum HOM05D006389 ORTHO05D007863 4.4e-17 93.6 168 36.9
MBI01_g14332_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 4.9e-16 90.1 100 48.0
HanXRQChr13g0389161 Helianthus annuus HOM05D006389 ORTHO05D007863 5.4e-15 86.7 53 71.7
Peaxi162Scf00559g00110 Petunia axillaris HOM05D006389 ORTHO05D007863 2.8e-11 74.3 56 60.7
QL01p005881 Quercus lobata HOM05D006389 ORTHO05D007863 1.1e-10 72.4 79 51.9
SEGI_11371 Sequoiadendron giganteum HOM05D006389 ORTHO05D007863 3.7e-08 63.9 87 41.4
SEGI_20259 Sequoiadendron giganteum HOM05D006389 ORTHO05D007863 4.1e-07 60.5 73 45.2
QL01p005785 Quercus lobata HOM05D148482 ORTHO05D337006 5.4e-07 60.1 34 82.4
MD03G1022900 Malus domestica HOM05D006389 ORTHO05D007863 9.2e-07 59.3 64 46.9


User provided reference genes

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