Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G052300 Carya illinoinensis HOM05D002376 ORTHO05D004654 1.3e-128 463.0 226 100.0
Cfa011807 Carpinus fangiana HOM05D002376 ORTHO05D004654 2.1e-70 269.6 238 60.5
Haze_24447 Corylus avellana HOM05D002376 ORTHO05D004654 9.9e-68 260.8 241 59.8
QL01p025227 Quercus lobata HOM05D002376 ORTHO05D004654 9.3e-66 254.2 233 60.1
Dinv28716 Davidia involucrata HOM05D002376 ORTHO05D004654 2.4e-45 186.4 251 44.6
Eucgr.J01841 Eucalyptus grandis HOM05D002376 ORTHO05D004654 7.2e-42 174.9 223 45.3
MD03G1055200 Malus domestica HOM05D002376 ORTHO05D004654 4.6e-41 172.2 276 39.9
MD11G1056400 Malus domestica HOM05D002376 ORTHO05D004654 5.1e-40 168.7 276 37.7
Prupe.6G045800 Prunus persica HOM05D002376 ORTHO05D004654 2.8e-38 162.9 290 39.3
Hma1.2p1_1637F.1_g294890 Hydrangea macrophylla HOM05D002376 ORTHO05D004654 3.7e-38 162.5 247 42.9
CANSAT54G2949 Cannabis sativa HOM05D002376 ORTHO05D004654 2.4e-37 159.8 217 43.8
Hma1.2p1_2270F.1_g318510 Hydrangea macrophylla HOM05D002376 ORTHO05D004654 3.1e-37 159.5 243 42.4
Prupe.6G043600 Prunus persica HOM05D002376 ORTHO05D004654 3.1e-37 159.5 288 39.6
PGR119G0696 Punica granatum HOM05D002376 ORTHO05D004654 4.1e-37 159.1 241 43.6
Actinidia23178 Actinidia chinensis HOM05D002376 ORTHO05D004654 5.9e-36 155.2 229 41.9
TAR369G0569 Trochodendron aralioides HOM05D002376 ORTHO05D004654 7.7e-36 154.8 252 41.7
ClCG03G000240 Citrullus lanatus HOM05D002376 ORTHO05D004654 6.5e-35 151.8 254 40.6
CSS0048295 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D004654 1.4e-34 150.6 240 38.8
FAN25G0776 Fragaria x ananassa HOM05D002376 ORTHO05D004654 1.4e-34 150.6 292 36.0
FvH4_3g40230 Fragaria vesca HOM05D002376 ORTHO05D004654 3.2e-34 149.4 288 36.1
FAN16G2868 Fragaria x ananassa HOM05D002376 ORTHO05D004654 4.2e-34 149.1 288 36.1
Ca_15029_v3 Cicer arietinum L. HOM05D002376 ORTHO05D004654 1.2e-33 147.5 246 39.0
FAN21G3096 Fragaria x ananassa HOM05D002376 ORTHO05D004654 1.6e-33 147.1 288 35.8
RcHm_v2.0_Chr5g0072441 Rosa chinensis HOM05D002376 ORTHO05D004654 1.6e-33 147.1 289 33.9
FAN11G3581 Fragaria x ananassa HOM05D002376 ORTHO05D004654 6.1e-33 145.2 288 35.8
VMungo0540G1534 Vigna mungo HOM05D002376 ORTHO05D004654 1.0e-32 144.4 256 39.1
Ciclev10001469m.g Citrus clementina HOM05D002376 ORTHO05D004654 2.3e-32 143.3 240 42.1
Glyma.11G161200 Glycine max HOM05D002376 ORTHO05D004654 2.3e-32 143.3 249 38.2
Glyma.18G054900 Glycine max HOM05D002376 ORTHO05D004654 5.1e-32 142.1 248 39.1
Phvul.006G076300 Phaseolus vulgaris HOM05D002376 ORTHO05D004654 5.1e-32 142.1 248 39.5
TWI79G1034 Tripterygium wilfordii HOM05D002376 ORTHO05D004654 3.3e-31 139.4 264 38.3
Medtr3g466410 Medicago truncatula HOM05D002376 ORTHO05D004654 5.7e-31 138.7 268 35.8
CSS0050025 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D004654 1.7e-30 137.1 243 36.2
Cpa.g.sc2.324 Carica papaya HOM05D002376 ORTHO05D004654 1.7e-30 137.1 257 38.9
Lalb_Chr15g0085961 Lupinus albus HOM05D002376 ORTHO05D004654 3.7e-30 136.0 257 37.7
Peaxi162Scf01078g00415 Petunia axillaris HOM05D002376 ORTHO05D004654 6.3e-30 135.2 239 37.2
Atru.chr1.2538 Acer truncatum HOM05D002376 ORTHO05D004654 1.1e-29 134.4 243 39.5
Nn5g26910 Nelumbo nucifera HOM05D002376 ORTHO05D004654 1.8e-29 133.7 266 39.5
Nitab4.5_0000734g0130 Nicotiana tabacum HOM05D002376 ORTHO05D004654 1.8e-29 133.7 230 39.6
Sc12g0000140 Simmondsia chinensis HOM05D002376 ORTHO05D004654 3.1e-29 132.9 248 35.1
MELO3C020503.2 Cucumis melo HOM05D002376 ORTHO05D004654 4.1e-29 132.5 266 36.5
CsaV3_1G036670 Cucumis sativus L. HOM05D002376 ORTHO05D004654 9.1e-29 131.3 274 35.8
PGSC0003DMG400020864 Solanum tuberosum HOM05D002376 ORTHO05D004654 9.1e-29 131.3 229 38.4
Lj6g0027008 Lotus japonicus HOM05D002376 ORTHO05D004654 2.6e-28 129.8 275 36.4
CAN.G473.25 Capsicum annuum HOM05D002376 ORTHO05D004654 5.9e-28 128.6 245 35.9
Sopen09g014780 Solanum pennellii HOM05D002376 ORTHO05D004654 5.9e-28 128.6 231 37.7
Sed0022472 Sechium edule HOM05D002376 ORTHO05D004654 7.7e-28 128.3 294 34.4
TPR.G24962 Trifolium pratense HOM05D002376 ORTHO05D004654 7.7e-28 128.3 273 34.4
THA.LOC104826270 Tarenaya hassleriana HOM05D002376 ORTHO05D004654 1.0e-27 127.9 237 38.4
Actinidia11613 Actinidia chinensis HOM05D000055 ORTHO05D000057 1.3e-27 127.5 223 37.7
Gohir.1Z049334 Gossypium hirsutum HOM05D002376 ORTHO05D004654 2.9e-27 126.3 301 33.9
Rhsim01G0242200 Rhododendron simsii HOM05D002376 ORTHO05D004654 3.8e-27 125.9 274 32.5
Manes.18G137600 Manihot esculenta HOM05D002376 ORTHO05D004654 5.0e-27 125.6 281 35.9
Thecc.09G361600 Theobroma cacao HOM05D002376 ORTHO05D004654 1.1e-26 124.4 306 34.0
Gohir.1Z049629 Gossypium hirsutum HOM05D002376 ORTHO05D004654 1.9e-26 123.6 308 33.1
Thhalv10016841m.g Eutrema salsugineum HOM05D002376 ORTHO05D004654 2.5e-26 123.2 243 35.4
arahy.Tifrunner.gnm1.ann1.D8LDTS Arachis hypogaea HOM05D002376 ORTHO05D004654 3.2e-26 122.9 267 34.8
arahy.Tifrunner.gnm1.ann1.WIJ2N1 Arachis hypogaea HOM05D002376 ORTHO05D004654 7.2e-26 121.7 273 34.1
Gohir.A13G235800 Gossypium hirsutum HOM05D002376 ORTHO05D004654 7.2e-26 121.7 305 33.8
Lalb_Chr20g0117351 Lupinus albus HOM05D002376 ORTHO05D004654 3.6e-25 119.4 288 30.9
ECA248G1568 Erigeron canadensis HOM05D002376 ORTHO05D004654 4.7e-25 119.0 277 32.9
MSTRG.21249 Avicennia marina HOM05D002376 ORTHO05D004654 8.0e-25 118.2 253 34.8
vmacro14632 Vaccinium macrocarpon HOM05D002376 ORTHO05D004654 8.0e-25 118.2 302 31.8
Cc01_g15150 Coffea canephora HOM05D002376 ORTHO05D004654 3.0e-24 116.3 256 35.9
Gohir.D04G000035 Gossypium hirsutum HOM05D002376 ORTHO05D004654 3.0e-24 116.3 99 61.6
Gorai.012G000400 Gossypium raimondii HOM05D002376 ORTHO05D004654 3.0e-24 116.3 99 61.6
Gohir.D13G241500 Gossypium hirsutum HOM05D002376 ORTHO05D004654 4.0e-24 115.9 304 32.9
Prupe.1G108400 Prunus persica HOM05D002376 ORTHO05D004654 4.0e-24 115.9 227 35.7
Gorai.005G269000 Gossypium raimondii HOM05D002376 ORTHO05D004654 5.2e-24 115.5 99 62.6
TAR623G0587 Trochodendron aralioides HOM05D002376 ORTHO05D004654 8.8e-24 114.8 75 68.0
Aa31LG5G6350 Aethionema arabicum HOM05D002376 ORTHO05D004654 1.1e-23 114.4 236 34.3
A03p16960 Brassica napus HOM05D002376 ORTHO05D004654 1.1e-23 114.4 246 32.1
Solyc09g031790.4 Solanum lycopersicum HOM05D002376 ORTHO05D004654 3.3e-23 112.8 251 34.3
Duzib168G1857 Durio zibethinus HOM05D002376 ORTHO05D004654 4.4e-23 112.5 306 31.0
Nitab4.5_0002601g0080 Nicotiana tabacum HOM05D002376 ORTHO05D004654 5.7e-23 112.1 201 34.8
COL.COLO4_11190 Corchorus olitorius HOM05D002376 ORTHO05D004654 7.5e-23 111.7 313 31.3
Gorai.013G272400 Gossypium raimondii HOM05D002376 ORTHO05D004654 9.7e-23 111.3 99 61.6
Prupe.1G106000 Prunus persica HOM05D002376 ORTHO05D004654 9.7e-23 111.3 100 57.0
C03p19980 Brassica napus HOM05D002376 ORTHO05D004654 1.3e-22 110.9 233 33.9
BolC3t14376H Brassica oleracea HOM05D002376 ORTHO05D004654 1.3e-22 110.9 233 33.9
Potri.019G127600 Populus trichocarpa HOM05D002376 ORTHO05D004654 3.7e-22 109.4 122 49.2
Sabra13G0125800 Salix brachista HOM05D002376 ORTHO05D004654 1.4e-21 107.5 117 48.7
Lsat_1_v5_gn_5_175220 Lactuca sativa HOM05D002376 ORTHO05D004654 1.8e-21 107.1 249 30.9
BcaC01g05989 Brassica carinata HOM05D002376 ORTHO05D004654 2.4e-21 106.7 234 34.2
BcaC02g08025 Brassica carinata HOM05D002376 ORTHO05D004654 1.2e-20 104.4 226 32.3
GSVIVG01024586001 Vitis vinifera HOM05D002376 ORTHO05D004654 1.2e-20 104.4 85 63.5
BcaB01g04112 Brassica carinata HOM05D002376 ORTHO05D004654 1.6e-20 104.0 242 32.6
DCAR_004798 Daucus carota HOM05D002376 ORTHO05D004654 1.6e-20 104.0 257 30.4
Gohir.A06G201400 Gossypium hirsutum HOM05D002376 ORTHO05D004654 1.6e-20 104.0 99 55.6
Gohir.A08G000028 Gossypium hirsutum HOM05D002376 ORTHO05D004654 1.6e-20 104.0 99 55.6
Potri.013G155900 Populus trichocarpa HOM05D002376 ORTHO05D004654 2.0e-20 103.6 79 60.8
Gohir.A02G179401 Gossypium hirsutum HOM05D002376 ORTHO05D036218 3.5e-20 102.8 95 60.0
HanXRQChr01g0013301 Helianthus annuus HOM05D002376 ORTHO05D004654 6.5e-19 98.6 285 29.5
Carub.0004s1150 Capsella rubella HOM05D002376 ORTHO05D004654 1.1e-18 97.8 259 30.1
CARHR123670 Cardamine hirsuta HOM05D002376 ORTHO05D004654 1.1e-18 97.8 238 30.7
SHI19259 Sapria himalayana HOM05D002376 ORTHO05D004654 5.5e-18 95.5 222 35.6
Thecc.10G043800 Theobroma cacao HOM05D002376 ORTHO05D004654 7.2e-18 95.1 98 54.1
Gohir.A05G415701 Gossypium hirsutum HOM05D002376 ORTHO05D004654 9.4e-18 94.7 71 66.2
C04p59280 Brassica napus HOM05D002376 ORTHO05D004654 1.2e-17 94.4 229 31.0
Zm00001eb303730 Zea mays HOM05D002376 ORTHO05D004654 1.2e-17 94.4 253 33.6
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 2.1e-17 93.6 85 50.6
BcaB06g28361 Brassica carinata HOM05D002376 ORTHO05D004654 2.7e-17 93.2 239 30.5
SGA_v2.0_scaffold6G03299 Striga asiatica HOM05D002376 ORTHO05D004654 3.6e-17 92.8 225 33.3
Aqoxy2G00731 Aquilegia oxysepala HOM05D002376 ORTHO05D004654 4.7e-17 92.4 69 58.0
A03p02950 Brassica napus HOM05D002376 ORTHO05D004654 6.1e-17 92.0 238 29.8
PSO339G0904 Papaver somniferum HOM05D002376 ORTHO05D004654 8.0e-17 91.7 96 50.0
Sp4g12910 Schrenkiella parvula HOM05D002376 ORTHO05D004654 1.4e-16 90.9 252 30.6
Migut.D00832 Erythranthe guttata HOM05D002376 ORTHO05D004654 2.3e-16 90.1 75 53.3
PSO384G2467 Papaver somniferum HOM05D002376 ORTHO05D004654 3.0e-16 89.7 111 45.9
SEGI_39190 Sequoiadendron giganteum HOM05D002376 ORTHO05D004654 6.8e-16 88.6 81 56.8
AL4G25210 Arabidopsis lyrata HOM05D002376 ORTHO05D004654 1.5e-15 87.4 259 30.1
BolC9t57873H Brassica oleracea HOM05D002376 ORTHO05D004654 1.5e-15 87.4 71 56.3
Aqoxy2G00736 Aquilegia oxysepala HOM05D002376 ORTHO05D004654 3.4e-15 86.3 77 54.5
CDE04G2750 Ceratophyllum demersum HOM05D002376 ORTHO05D004654 3.4e-15 86.3 248 27.4
AUR62036221 Chenopodium quinoa HOM05D002376 ORTHO05D004654 3.4e-15 86.3 128 38.3
MSTRG.12701 Avicennia marina HOM05D002376 ORTHO05D004654 4.4e-15 85.9 82 53.7
EL10Ac7g15858 Beta vulgaris HOM05D002376 ORTHO05D004654 7.5e-15 85.1 103 38.8
C09p50170 Brassica napus HOM05D002376 ORTHO05D004654 7.5e-15 85.1 71 54.9
BolC4t27433H Brassica oleracea HOM05D002376 ORTHO05D004654 7.5e-15 85.1 225 29.8
Gohir.1Z049465 Gossypium hirsutum HOM05D002376 ORTHO05D004654 7.5e-15 85.1 99 52.5
Gohir.A08G000016 Gossypium hirsutum HOM05D002376 ORTHO05D004654 7.5e-15 85.1 99 52.5
AT2G30350 Arabidopsis thaliana HOM05D002376 ORTHO05D004654 1.3e-14 84.3 246 29.3
unitig_747.g21450 Utricularia gibba HOM05D002376 ORTHO05D004654 1.3e-14 84.3 232 31.9
A04p23110 Brassica napus HOM05D002376 ORTHO05D004654 2.8e-14 83.2 234 28.6
AUR62009726 Chenopodium quinoa HOM05D002376 ORTHO05D004654 2.8e-14 83.2 112 41.1
BraA04t17841Z Brassica rapa HOM05D002376 ORTHO05D004654 3.7e-14 82.8 234 28.2
C04p59230 Brassica napus HOM05D002376 ORTHO05D004654 4.8e-14 82.4 102 46.1
ATR0681G169 Amborella trichopoda HOM05D002376 ORTHO05D004654 8.3e-14 81.6 54 70.4
Psat5g150440 Pisum sativum HOM05D002376 ORTHO05D004654 7.0e-13 78.6 274 27.0
Gorai.010G000700 Gossypium raimondii HOM05D002376 ORTHO05D004654 5.9e-12 75.5 59 61.0
AagrBONN_evm.TU.Sc2ySwM_369.511 Anthoceros agrestis HOM05D002376 ORTHO05D004654 1.7e-11 73.9 76 47.4
BcaC02g08132 Brassica carinata HOM05D002376 ORTHO05D004654 2.2e-11 73.6 81 48.1
BolC4t27329H Brassica oleracea HOM05D002376 ORTHO05D004654 2.2e-11 73.6 81 48.1
Hund05050 Selenicereus undatus HOM05D002376 ORTHO05D004654 6.5e-11 72.0 68 48.5
BcaC02g08029 Brassica carinata HOM05D002376 ORTHO05D004654 8.5e-11 71.6 243 28.4
C07p50650 Brassica napus HOM05D002376 ORTHO05D004654 8.5e-11 71.6 44 70.5
BolC7t45569H Brassica oleracea HOM05D002376 ORTHO05D004654 8.5e-11 71.6 44 70.5
C02p16040 Brassica napus HOM05D002376 ORTHO05D004654 1.1e-10 71.2 44 70.5
Os07g0230500 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D004654 1.1e-10 71.2 49 61.2
Lj1P122T40 Lonicera japonica HOM05D002376 ORTHO05D004654 1.5e-10 70.9 222 29.7
C09p15830 Brassica napus HOM05D001212 ORTHO05D000246 1.2e-09 67.8 42 69.0
CBR_g20119 Chara braunii HOM05D002376 ORTHO05D004654 1.6e-09 67.4 77 41.6
SEGI_33829 Sequoiadendron giganteum HOM05D002376 ORTHO05D004654 2.7e-09 66.6 57 49.1
Cpa.g.sc2.244 Carica papaya HOM05D002376 ORTHO05D004654 3.0e-08 63.2 41 68.3
CDE12G0746 Ceratophyllum demersum HOM05D002376 ORTHO05D004654 8.8e-08 61.6 41 61.0
HPP92_007517 Vanilla planifolia HOM05D002376 ORTHO05D004654 2.0e-07 60.5 58 46.6
Pp3c10_1920 Physcomitrium patens HOM05D002376 ORTHO05D004654 4.9e-06 55.8 110 32.7


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