Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G052200 Carya illinoinensis HOM05D002376 ORTHO05D004654 3.7e-73 278.1 138 100.0
Haze_24447 Corylus avellana HOM05D002376 ORTHO05D004654 8.0e-44 180.6 102 84.3
QL01p025227 Quercus lobata HOM05D002376 ORTHO05D004654 2.2e-41 172.6 122 71.3
CSS0050025 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D004654 9.4e-37 157.1 106 74.5
Thhalv10016841m.g Eutrema salsugineum HOM05D002376 ORTHO05D004654 1.2e-36 156.8 102 74.5
CSS0048295 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D004654 2.1e-36 156.0 104 75.0
Carub.0004s1150 Capsella rubella HOM05D002376 ORTHO05D004654 4.7e-36 154.8 102 74.5
Duzib168G1857 Durio zibethinus HOM05D002376 ORTHO05D004654 4.7e-36 154.8 121 61.2
AT2G30350 Arabidopsis thaliana HOM05D002376 ORTHO05D004654 8.0e-36 154.1 120 67.5
AL4G25210 Arabidopsis lyrata HOM05D002376 ORTHO05D004654 1.0e-35 153.7 120 67.5
Hma1.2p1_1637F.1_g294890 Hydrangea macrophylla HOM05D002376 ORTHO05D004654 1.4e-35 153.3 107 72.9
Thecc.09G361600 Theobroma cacao HOM05D002376 ORTHO05D004654 1.4e-35 153.3 132 60.6
BraA04t17841Z Brassica rapa HOM05D002376 ORTHO05D004654 1.8e-35 152.9 104 75.0
Sp4g12910 Schrenkiella parvula HOM05D002376 ORTHO05D004654 2.3e-35 152.5 107 71.0
C04p59280 Brassica napus HOM05D002376 ORTHO05D004654 5.2e-35 151.4 104 71.2
BolC4t27433H Brassica oleracea HOM05D002376 ORTHO05D004654 5.2e-35 151.4 104 71.2
BcaC02g08025 Brassica carinata HOM05D002376 ORTHO05D004654 1.2e-34 150.2 104 70.2
Aa31LG5G6350 Aethionema arabicum HOM05D002376 ORTHO05D004654 1.5e-34 149.8 102 72.5
Cpa.g.sc2.324 Carica papaya HOM05D002376 ORTHO05D004654 1.5e-34 149.8 102 71.6
THA.LOC104826270 Tarenaya hassleriana HOM05D002376 ORTHO05D004654 1.5e-34 149.8 101 71.3
MSTRG.21249 Avicennia marina HOM05D002376 ORTHO05D004654 2.0e-34 149.4 102 69.6
CARHR123670 Cardamine hirsuta HOM05D002376 ORTHO05D004654 2.0e-34 149.4 120 65.8
TAR369G0569 Trochodendron aralioides HOM05D002376 ORTHO05D004654 2.0e-34 149.4 123 61.8
Dinv28716 Davidia involucrata HOM05D002376 ORTHO05D004654 3.4e-34 148.7 102 72.5
Oeu011367.1 Olea europaea HOM05D002376 ORTHO05D004654 4.4e-34 148.3 132 59.8
Actinidia23178 Actinidia chinensis HOM05D002376 ORTHO05D004654 5.7e-34 147.9 105 71.4
CANSAT54G2949 Cannabis sativa HOM05D002376 ORTHO05D004654 7.5e-34 147.5 102 72.5
SGA_v2.0_scaffold6G03299 Striga asiatica HOM05D002376 ORTHO05D004654 7.5e-34 147.5 102 72.5
BcaB06g28361 Brassica carinata HOM05D002376 ORTHO05D004654 1.3e-33 146.7 104 70.2
Gohir.1Z049629 Gossypium hirsutum HOM05D002376 ORTHO05D004654 1.7e-33 146.4 78 84.6
Gohir.D04G000035 Gossypium hirsutum HOM05D002376 ORTHO05D004654 1.7e-33 146.4 78 84.6
Gohir.D13G241450 Gossypium hirsutum HOM05D002376 ORTHO05D004654 1.7e-33 146.4 78 84.6
Gorai.012G000400 Gossypium raimondii HOM05D002376 ORTHO05D004654 1.7e-33 146.4 78 84.6
A04p23110 Brassica napus HOM05D002376 ORTHO05D004654 2.2e-33 146.0 103 72.8
Migut.D00832 Erythranthe guttata HOM05D002376 ORTHO05D004654 2.2e-33 146.0 102 69.6
Gohir.A13G235800 Gossypium hirsutum HOM05D002376 ORTHO05D004654 2.2e-33 146.0 121 60.3
A03p16960 Brassica napus HOM05D002376 ORTHO05D004654 3.7e-33 145.2 102 68.6
BcaB01g04112 Brassica carinata HOM05D002376 ORTHO05D004654 6.3e-33 144.4 102 69.6
Lj6g0027008 Lotus japonicus HOM05D002376 ORTHO05D004654 6.3e-33 144.4 106 70.8
COL.COLO4_11190 Corchorus olitorius HOM05D002376 ORTHO05D004654 8.3e-33 144.1 94 73.4
TPR.G24962 Trifolium pratense HOM05D002376 ORTHO05D004654 8.3e-33 144.1 109 67.0
Glyma.18G054900 Glycine max HOM05D002376 ORTHO05D004654 1.1e-32 143.7 102 69.6
Thecc.10G043800 Theobroma cacao HOM05D002376 ORTHO05D004654 1.1e-32 143.7 95 71.6
GSVIVG01024586001 Vitis vinifera HOM05D002376 ORTHO05D004654 1.1e-32 143.7 103 72.8
Gorai.013G272400 Gossypium raimondii HOM05D002376 ORTHO05D004654 1.4e-32 143.3 78 83.3
MD03G1055200 Malus domestica HOM05D002376 ORTHO05D004654 1.8e-32 142.9 101 70.3
Atru.chr1.2538 Acer truncatum HOM05D002376 ORTHO05D004654 2.4e-32 142.5 112 65.2
HanXRQChr01g0013301 Helianthus annuus HOM05D002376 ORTHO05D004654 3.1e-32 142.1 108 65.7
Nn5g26899 Nelumbo nucifera HOM05D002376 ORTHO05D004654 3.1e-32 142.1 83 80.7
Prupe.6G043600 Prunus persica HOM05D002376 ORTHO05D004654 3.1e-32 142.1 82 79.3
Psat5g150440 Pisum sativum HOM05D002376 ORTHO05D004654 5.4e-32 141.4 73 89.0
Hma1.2p1_2270F.1_g318510 Hydrangea macrophylla HOM05D002376 ORTHO05D004654 9.1e-32 140.6 102 69.6
Medtr3g466410 Medicago truncatula HOM05D002376 ORTHO05D004654 9.1e-32 140.6 71 88.7
Phvul.006G076300 Phaseolus vulgaris HOM05D002376 ORTHO05D004654 9.1e-32 140.6 104 69.2
Prupe.6G045800 Prunus persica HOM05D002376 ORTHO05D004654 9.1e-32 140.6 82 79.3
TWI79G1034 Tripterygium wilfordii HOM05D002376 ORTHO05D004654 9.1e-32 140.6 102 69.6
ATR0681G169 Amborella trichopoda HOM05D002376 ORTHO05D004654 1.2e-31 140.2 72 87.5
Eucgr.J01841 Eucalyptus grandis HOM05D002376 ORTHO05D004654 1.2e-31 140.2 128 56.2
Lsat_1_v5_gn_5_175220 Lactuca sativa HOM05D002376 ORTHO05D004654 1.6e-31 139.8 108 68.5
CAN.G473.25 Capsicum annuum HOM05D002376 ORTHO05D004654 2.0e-31 139.4 102 66.7
BcaC01g05989 Brassica carinata HOM05D002376 ORTHO05D004654 2.7e-31 139.0 70 88.6
C03p19980 Brassica napus HOM05D002376 ORTHO05D004654 2.7e-31 139.0 70 88.6
BolC3t14376H Brassica oleracea HOM05D002376 ORTHO05D004654 2.7e-31 139.0 70 88.6
MD11G1056400 Malus domestica HOM05D002376 ORTHO05D004654 2.7e-31 139.0 102 65.7
Peaxi162Scf01078g00415 Petunia axillaris HOM05D002376 ORTHO05D004654 2.7e-31 139.0 102 66.7
RcHm_v2.0_Chr5g0072441 Rosa chinensis HOM05D002376 ORTHO05D004654 3.5e-31 138.7 103 68.9
arahy.Tifrunner.gnm1.ann1.WIJ2N1 Arachis hypogaea HOM05D002376 ORTHO05D004654 4.5e-31 138.3 102 68.6
Cc01_g15150 Coffea canephora HOM05D002376 ORTHO05D004654 4.5e-31 138.3 111 61.3
Prupe.1G106000 Prunus persica HOM05D002376 ORTHO05D004654 5.9e-31 137.9 101 68.3
TAR623G0587 Trochodendron aralioides HOM05D002376 ORTHO05D004654 7.7e-31 137.5 123 61.0
MSTRG.12701 Avicennia marina HOM05D002376 ORTHO05D004654 1.0e-30 137.1 102 69.6
Manes.18G137600 Manihot esculenta HOM05D002376 ORTHO05D004654 1.0e-30 137.1 116 59.5
PGR119G0696 Punica granatum HOM05D002376 ORTHO05D004654 1.0e-30 137.1 89 71.9
Ca_15029_v3 Cicer arietinum L. HOM05D002376 ORTHO05D004654 1.3e-30 136.7 112 62.5
FvH4_3g40230 Fragaria vesca HOM05D002376 ORTHO05D004654 1.3e-30 136.7 72 84.7
FAN11G3581 Fragaria x ananassa HOM05D002376 ORTHO05D004654 1.3e-30 136.7 72 84.7
FAN16G2868 Fragaria x ananassa HOM05D002376 ORTHO05D004654 1.3e-30 136.7 72 84.7
FAN21G3096 Fragaria x ananassa HOM05D002376 ORTHO05D004654 1.3e-30 136.7 72 84.7
FAN25G0776 Fragaria x ananassa HOM05D002376 ORTHO05D004654 1.3e-30 136.7 72 84.7
Prupe.1G103400 Prunus persica HOM05D002376 ORTHO05D004654 1.3e-30 136.7 99 68.7
VMungo0540G1534 Vigna mungo HOM05D002376 ORTHO05D004654 1.3e-30 136.7 71 87.3
CDE04G2750 Ceratophyllum demersum HOM05D002376 ORTHO05D004654 2.3e-30 136.0 69 87.0
Ciclev10001469m.g Citrus clementina HOM05D002376 ORTHO05D004654 2.9e-30 135.6 133 60.2
Nitab4.5_0002601g0080 Nicotiana tabacum HOM05D002376 ORTHO05D004654 3.8e-30 135.2 105 65.7
Sc12g0000140 Simmondsia chinensis HOM05D002376 ORTHO05D004654 5.0e-30 134.8 78 74.4
Rhsim01G0242200 Rhododendron simsii HOM05D002376 ORTHO05D004654 6.6e-30 134.4 116 64.7
arahy.Tifrunner.gnm1.ann1.D8LDTS Arachis hypogaea HOM05D002376 ORTHO05D004654 8.6e-30 134.0 75 81.3
Sed0022472 Sechium edule HOM05D002376 ORTHO05D004654 1.1e-29 133.7 102 62.7
EL10Ac7g15858 Beta vulgaris HOM05D002376 ORTHO05D004654 1.9e-29 132.9 102 60.8
Potri.019G127600 Populus trichocarpa HOM05D002376 ORTHO05D004654 1.9e-29 132.9 100 65.0
Sabra13G0125800 Salix brachista HOM05D002376 ORTHO05D004654 1.9e-29 132.9 98 66.3
Solyc09g031790.4 Solanum lycopersicum HOM05D002376 ORTHO05D004654 1.9e-29 132.9 100 63.0
PGSC0003DMG400020864 Solanum tuberosum HOM05D002376 ORTHO05D004654 2.5e-29 132.5 78 76.9
AUR62009726 Chenopodium quinoa HOM05D002376 ORTHO05D004654 3.3e-29 132.1 99 65.7
Potri.013G155900 Populus trichocarpa HOM05D002376 ORTHO05D004654 3.3e-29 132.1 98 66.3
Sopen09g014780 Solanum pennellii HOM05D002376 ORTHO05D004654 3.3e-29 132.1 97 64.9
Lalb_Chr20g0117351 Lupinus albus HOM05D002376 ORTHO05D004654 4.2e-29 131.7 116 62.9
Lalb_Chr15g0085961 Lupinus albus HOM05D002376 ORTHO05D004654 5.5e-29 131.3 112 62.5
ClCG03G000240 Citrullus lanatus HOM05D002376 ORTHO05D004654 7.2e-29 131.0 105 61.9
PSO339G0904 Papaver somniferum HOM05D002376 ORTHO05D004654 7.2e-29 131.0 104 64.4
vmacro14632 Vaccinium macrocarpon HOM05D002376 ORTHO05D004654 9.5e-29 130.6 104 67.3
Aqoxy2G00736 Aquilegia oxysepala HOM05D002376 ORTHO05D004654 1.2e-28 130.2 105 61.0
ECA248G1568 Erigeron canadensis HOM05D002376 ORTHO05D004654 1.2e-28 130.2 115 57.4
Gohir.1Z049334 Gossypium hirsutum HOM05D002376 ORTHO05D004654 1.6e-28 129.8 69 84.1
SHI19259 Sapria himalayana HOM05D002376 ORTHO05D004654 2.1e-28 129.4 101 59.4
MELO3C020503.2 Cucumis melo HOM05D002376 ORTHO05D004654 2.8e-28 129.0 105 60.0
Nitab4.5_0000734g0130 Nicotiana tabacum HOM05D002376 ORTHO05D004654 2.8e-28 129.0 101 66.3
PSO384G2467 Papaver somniferum HOM05D002376 ORTHO05D004654 3.6e-28 128.6 106 65.1
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 3.6e-28 128.6 107 62.6
Zm00001eb303730 Zea mays HOM05D002376 ORTHO05D004654 3.6e-28 128.6 87 70.1
DCAR_004798 Daucus carota HOM05D002376 ORTHO05D004654 6.1e-28 127.9 67 82.1
unitig_747.g21450 Utricularia gibba HOM05D002376 ORTHO05D004654 6.1e-28 127.9 71 81.7
Hund05050 Selenicereus undatus HOM05D002376 ORTHO05D004654 8.0e-28 127.5 100 61.0
Aqoxy2G00731 Aquilegia oxysepala HOM05D002376 ORTHO05D004654 2.6e-26 122.5 101 62.4
Pp3c10_1920 Physcomitrium patens HOM05D002376 ORTHO05D004654 2.2e-25 119.4 67 76.1
SMO364G0016 Selaginella moellendorffii HOM05D002376 ORTHO05D004654 6.3e-25 117.9 67 77.6
Gohir.1Z049465 Gossypium hirsutum HOM05D002376 ORTHO05D004654 1.8e-24 116.3 78 70.5
Cre07.g351500 Chlamydomonas reinhardtii HOM05D002376 ORTHO05D004654 4.1e-24 115.2 84 63.1
Actinidia11613 Actinidia chinensis HOM05D000055 ORTHO05D000057 7.0e-24 114.4 98 59.2
Os07g0230500 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D004654 7.0e-24 114.4 63 82.5
AagrBONN_evm.TU.Sc2ySwM_369.511 Anthoceros agrestis HOM05D002376 ORTHO05D004654 5.9e-23 111.3 67 68.7
Mapoly0004s0007 Marchantia polymorpha HOM05D002376 ORTHO05D004654 3.6e-20 102.1 65 69.2
Gohir.A08G000016 Gossypium hirsutum HOM05D002376 ORTHO05D004654 4.7e-20 101.7 53 84.9
Eucgr.C01059 Eucalyptus grandis HOM05D002376 ORTHO05D004654 8.0e-20 100.9 51 86.3
CBR_g31178 Chara braunii HOM05D002376 ORTHO05D004654 2.0e-18 96.3 67 61.2
MCO16G118 Micromonas commoda HOM05D002376 ORTHO05D004654 7.5e-18 94.4 76 57.9
C04p59230 Brassica napus HOM05D002376 ORTHO05D004654 3.7e-17 92.0 46 89.1
CsaV3_1G036670 Cucumis sativus L. HOM05D002376 ORTHO05D004654 1.1e-16 90.5 48 83.3
PRCOL_00000864 Prasinoderma coloniale HOM05D002376 ORTHO05D004654 3.5e-15 85.5 89 51.7
FAN26G2163 Fragaria x ananassa HOM05D002376 ORTHO05D004654 1.6e-12 76.6 61 55.7
CBR_g20119 Chara braunii HOM05D002376 ORTHO05D004654 4.7e-12 75.1 88 44.3
Cfa023829 Carpinus fangiana HOM05D002376 ORTHO05D004654 1.4e-11 73.6 68 48.5
Cc04_g14680 Coffea canephora HOM05D000916 ORTHO05D009274 9.2e-08 60.8 95 33.7
FvH4_7g05780 Fragaria vesca HOM05D014655 ORTHO05D045933 2.1e-07 59.7 41 61.0
Mapoly0059s0058 Marchantia polymorpha HOM05D000916 ORTHO05D009274 2.1e-07 59.7 66 47.0
Eucgr.G03277 Eucalyptus grandis HOM05D000916 ORTHO05D009274 4.6e-07 58.5 109 32.1
Nitab4.5_0002888g0050 Nicotiana tabacum HOM05D000916 ORTHO05D009274 6.0e-07 58.2 92 34.8
SEGI_20425 Sequoiadendron giganteum HOM05D000916 ORTHO05D009274 6.0e-07 58.2 78 37.2
FAN19G3001 Fragaria x ananassa HOM05D014655 ORTHO05D045933 2.3e-06 56.2 47 53.2
Oeu049471.1 Olea europaea HOM05D000916 ORTHO05D009274 3.9e-06 55.5 102 30.4
AUR62023107 Chenopodium quinoa HOM05D000916 ORTHO05D009274 6.6e-06 54.7 83 32.5


User provided reference genes

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