Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G046500 Carya illinoinensis HOM05D000003 ORTHO05D000126 2.3e-176 622.1 312 100.0
Lj3g0009751 Lotus japonicus HOM05D000003 ORTHO05D000126 1.5e-10 71.2 92 35.9
Prupe.1G197400 Prunus persica HOM05D000003 ORTHO05D000126 2.6e-10 70.5 65 50.8
Dinv10706 Davidia involucrata HOM05D000003 ORTHO05D000126 3.4e-10 70.1 68 50.0
CSS0041731 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 4.5e-10 69.7 65 50.8
CSS0018636 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 7.6e-10 68.9 109 40.4
CSS0004935 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 1.0e-09 68.6 68 47.1
CSS0016982 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 1.0e-09 68.6 68 47.1
CSS0013263 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 1.3e-09 68.2 92 37.0
CSS0049896 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 1.7e-09 67.8 65 50.8
Oeu000328.1 Olea europaea HOM05D000003 ORTHO05D000126 1.7e-09 67.8 112 33.9
Dinv10341 Davidia involucrata HOM05D001724 ORTHO05D007284 2.2e-09 67.4 68 42.6
Dinv15867 Davidia involucrata HOM05D000003 ORTHO05D000126 2.2e-09 67.4 68 42.6
AUR62016456 Chenopodium quinoa HOM05D000003 ORTHO05D000126 2.9e-09 67.0 88 35.2
Lj1P1051T34 Lonicera japonica HOM05D000003 ORTHO05D000126 2.9e-09 67.0 67 44.8
Lj3g0007232 Lotus japonicus HOM05D000003 ORTHO05D000126 2.9e-09 67.0 95 35.8
CSS0003652 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 3.8e-09 66.6 128 38.3
CSS0006606 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 6.5e-09 65.9 109 38.5
QL01p000768 Quercus lobata HOM05D000003 ORTHO05D000126 6.5e-09 65.9 70 41.4
LjContig00312_ERROPOS870357g0011324 Lotus japonicus HOM05D000003 ORTHO05D000126 8.5e-09 65.5 82 37.8
QL02p014730 Quercus lobata HOM05D000003 ORTHO05D000126 8.5e-09 65.5 70 40.0
QL02p066394 Quercus lobata HOM05D000003 ORTHO05D000126 8.5e-09 65.5 68 38.2
QL10p058267 Quercus lobata HOM05D000003 ORTHO05D000126 8.5e-09 65.5 70 41.4
vmacro02127 Vaccinium macrocarpon HOM05D000003 ORTHO05D000004 8.5e-09 65.5 68 45.6
CSS0044481 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 1.1e-08 65.1 69 39.1
Lj6g0025856 Lotus japonicus HOM05D000003 ORTHO05D000126 1.1e-08 65.1 82 37.8
Lj1P554T9 Lonicera japonica HOM05D000003 ORTHO05D000126 1.4e-08 64.7 66 39.4
Lj8C13T6 Lonicera japonica HOM05D000003 ORTHO05D000126 1.4e-08 64.7 68 41.2
Lj3P316T7 Lonicera japonica HOM05D000003 ORTHO05D000126 1.9e-08 64.3 91 36.3
QL04p056296 Quercus lobata HOM05D000003 ORTHO05D000004 1.9e-08 64.3 70 40.0
CSS0020689 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 2.5e-08 63.9 68 42.6
Dinv03310 Davidia involucrata HOM05D000003 ORTHO05D000126 2.5e-08 63.9 68 42.6
Dinv06062 Davidia involucrata HOM05D000003 ORTHO05D000126 3.2e-08 63.5 68 42.6
Dinv34280 Davidia involucrata HOM05D000003 ORTHO05D000126 3.2e-08 63.5 100 33.0
Lj5P457T10 Lonicera japonica HOM05D000003 ORTHO05D000126 3.2e-08 63.5 78 39.7
AUR62022477 Chenopodium quinoa HOM05D000003 ORTHO05D000126 4.2e-08 63.2 88 34.1
TWI23G1165 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 4.2e-08 63.2 65 43.1
CSS0003648 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 5.5e-08 62.8 68 41.2
AUR62027518 Chenopodium quinoa HOM05D000003 ORTHO05D000126 5.5e-08 62.8 88 35.2
Dinv10481 Davidia involucrata HOM05D000003 ORTHO05D000126 5.5e-08 62.8 112 34.8
Lj2C325T18 Lonicera japonica HOM05D000003 ORTHO05D000126 5.5e-08 62.8 68 41.2
Lj4C893T10 Lonicera japonica HOM05D000003 ORTHO05D000126 5.5e-08 62.8 68 41.2
Lj4C35T6 Lonicera japonica HOM05D000003 ORTHO05D000126 7.2e-08 62.4 67 40.3
Lj8P336T24 Lonicera japonica HOM05D000003 ORTHO05D000126 9.3e-08 62.0 68 35.3
QL05p043073 Quercus lobata HOM05D000003 ORTHO05D000126 9.3e-08 62.0 65 43.1
Lj5P52T12 Lonicera japonica HOM05D000003 ORTHO05D000126 1.2e-07 61.6 68 42.6
Rhsim03G0079400 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.2e-07 61.6 69 44.9
Rhsim03G0080000 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.2e-07 61.6 69 44.9
AUR62036896 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.6e-07 61.2 88 34.1
Dinv25744 Davidia involucrata HOM05D000003 ORTHO05D000126 1.6e-07 61.2 88 34.1
Rhsim01G0174000 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.6e-07 61.2 69 46.4
Sed0026203 Sechium edule HOM05D000003 ORTHO05D000126 1.6e-07 61.2 88 36.4
Lj4C408G4 Lonicera japonica HOM05D000003 ORTHO05D000126 2.1e-07 60.8 57 40.4
Lj4C411T6 Lonicera japonica HOM05D000003 ORTHO05D000126 2.1e-07 60.8 50 46.0
Lj9C481T2 Lonicera japonica HOM05D000003 ORTHO05D000004 2.1e-07 60.8 68 36.8
QL02p097725 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-07 60.8 128 28.9
Haze_08252 Corylus avellana HOM05D009546 ORTHO05D014580 2.7e-07 60.5 68 39.7
FvH4_5g37180 Fragaria vesca HOM05D000003 ORTHO05D011454 2.7e-07 60.5 69 49.3
Lj2P1027T17 Lonicera japonica HOM05D000003 ORTHO05D000126 2.7e-07 60.5 93 36.6
Lj5P270T37 Lonicera japonica HOM05D000003 ORTHO05D000126 2.7e-07 60.5 68 33.8
TWI31G0464 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 2.7e-07 60.5 65 40.0
AUR62001213 Chenopodium quinoa HOM05D000025 ORTHO05D000040 3.6e-07 60.1 90 33.3
COL.COLO4_28522 Corchorus olitorius HOM05D000003 ORTHO05D000126 3.6e-07 60.1 88 35.2
Rhsim06G0043400 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.6e-07 60.1 86 36.0
Dinv28092 Davidia involucrata HOM05D000003 ORTHO05D000126 4.6e-07 59.7 68 38.2
Lj2A924G27 Lonicera japonica HOM05D000003 ORTHO05D000126 4.6e-07 59.7 59 47.5
Lj2C538T6 Lonicera japonica HOM05D000003 ORTHO05D000126 4.6e-07 59.7 64 34.4
Lj7P127T7 Lonicera japonica HOM05D000003 ORTHO05D000126 4.6e-07 59.7 57 42.1
Lj1P912T26 Lonicera japonica HOM05D000003 ORTHO05D000126 6.1e-07 59.3 57 42.1
Lj6P432T2 Lonicera japonica HOM05D000003 ORTHO05D000126 6.1e-07 59.3 57 42.1
Sed0017531 Sechium edule HOM05D000003 ORTHO05D000126 6.1e-07 59.3 85 34.1
TWI39G0375 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 7.9e-07 58.9 65 38.5
TWI56G0633 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 7.9e-07 58.9 65 38.5
Atru.chr4.156 Acer truncatum HOM05D000003 ORTHO05D000126 1.0e-06 58.5 71 31.0
Dinv16534 Davidia involucrata HOM05D000003 ORTHO05D000126 1.0e-06 58.5 137 31.4
FvH4_3g22921 Fragaria vesca HOM05D000003 ORTHO05D000126 1.0e-06 58.5 65 50.8
Lj5P129T22 Lonicera japonica HOM05D000003 ORTHO05D000126 1.0e-06 58.5 67 38.8
Lj9P463T30 Lonicera japonica HOM05D000003 ORTHO05D000126 1.0e-06 58.5 57 42.1
QL10p059361 Quercus lobata HOM05D000003 ORTHO05D000126 1.0e-06 58.5 64 39.1
Atru.chr1.3557 Acer truncatum HOM05D000003 ORTHO05D000126 1.3e-06 58.2 65 38.5
CSS0015504 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 1.3e-06 58.2 58 46.6
AUR62014309 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.3e-06 58.2 89 34.8
Lj1P222T20 Lonicera japonica HOM05D000003 ORTHO05D000126 1.3e-06 58.2 69 36.2
Lj1P98T8 Lonicera japonica HOM05D000003 ORTHO05D000126 1.3e-06 58.2 57 40.4
AUR62024889 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.8e-06 57.8 88 31.8
AUR62030615 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.8e-06 57.8 91 37.4
Medtr0010s0350 Medicago truncatula HOM05D000003 ORTHO05D000126 1.8e-06 57.8 91 31.9
Medtr0010s0370 Medicago truncatula HOM05D000003 ORTHO05D000126 1.8e-06 57.8 91 31.9
QL08p033637 Quercus lobata HOM05D000003 ORTHO05D000006 1.8e-06 57.8 63 41.3
QL11p025676 Quercus lobata HOM05D000003 ORTHO05D000126 1.8e-06 57.8 64 39.1
TPR.G21894 Trifolium pratense HOM05D000003 ORTHO05D000126 1.8e-06 57.8 69 36.2
AUR62004908 Chenopodium quinoa HOM05D000003 ORTHO05D000006 2.3e-06 57.4 62 45.2
Dinv03294 Davidia involucrata HOM05D000003 ORTHO05D000126 2.3e-06 57.4 68 38.2
Lj6P424T4 Lonicera japonica HOM05D000003 ORTHO05D000126 2.3e-06 57.4 53 43.4
QL03p048232 Quercus lobata HOM05D000003 ORTHO05D000126 2.3e-06 57.4 65 41.5
Atru.chr6.1097 Acer truncatum HOM05D000003 ORTHO05D000126 3.0e-06 57.0 65 36.9
Ah.10g024870 Amaranthus hybridus HOM05D005498 ORTHO05D006719 3.0e-06 57.0 86 36.0
AUR62001732 Chenopodium quinoa HOM05D000003 ORTHO05D000126 3.0e-06 57.0 74 39.2
Dinv06832 Davidia involucrata HOM05D000003 ORTHO05D000126 3.0e-06 57.0 129 30.2
FvH4_3g05891 Fragaria vesca HOM05D000003 ORTHO05D000126 3.0e-06 57.0 68 38.2
Sed0024751 Sechium edule HOM05D000003 ORTHO05D000126 3.0e-06 57.0 68 36.8
AUR62006131 Chenopodium quinoa HOM05D000003 ORTHO05D000126 3.9e-06 56.6 93 38.7
AUR62029005 Chenopodium quinoa HOM05D000003 ORTHO05D000126 3.9e-06 56.6 97 35.1
Lju897C2T1 Lonicera japonica HOM05D000003 ORTHO05D000126 3.9e-06 56.6 67 34.3
TWI38G1337 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 3.9e-06 56.6 75 36.0
Dinv09809 Davidia involucrata HOM05D000003 ORTHO05D000126 5.1e-06 56.2 68 38.2
Lj2C654T5 Lonicera japonica HOM05D000003 ORTHO05D000126 5.1e-06 56.2 65 40.0
Lj9C38T11 Lonicera japonica HOM05D000003 ORTHO05D000126 5.1e-06 56.2 68 36.8
QL05p080911 Quercus lobata HOM05D000774 ORTHO05D000602 5.1e-06 56.2 64 39.1
QL12p020478 Quercus lobata HOM05D000003 ORTHO05D000126 5.1e-06 56.2 65 40.0
AUR62031375 Chenopodium quinoa HOM05D000003 ORTHO05D000006 6.7e-06 55.8 62 43.5
COL.COLO4_27452 Corchorus olitorius HOM05D013553 ORTHO05D000126 6.7e-06 55.8 88 34.1
QL04p092364 Quercus lobata HOM05D000003 ORTHO05D000126 6.7e-06 55.8 63 39.7
Sed0025570 Sechium edule HOM05D000003 ORTHO05D000126 6.7e-06 55.8 92 32.6
Atru.chr13.891 Acer truncatum HOM05D000003 ORTHO05D000126 8.7e-06 55.5 72 31.9
AUR62027413 Chenopodium quinoa HOM05D000003 ORTHO05D000126 8.7e-06 55.5 64 39.1
AUR62029897 Chenopodium quinoa HOM05D000003 ORTHO05D000126 8.7e-06 55.5 63 41.3
Dinv24368 Davidia involucrata HOM05D000003 ORTHO05D000126 8.7e-06 55.5 68 41.2
Dinv26582 Davidia involucrata HOM05D055339 ORTHO05D000126 8.7e-06 55.5 65 38.5
Lj7P520T7 Lonicera japonica HOM05D000003 ORTHO05D000126 8.7e-06 55.5 67 34.3
Lj5g0024244 Lotus japonicus HOM05D000003 ORTHO05D000126 8.7e-06 55.5 67 35.8
Nn8g41082 Nelumbo nucifera HOM05D000003 ORTHO05D000126 8.7e-06 55.5 71 33.8
QL04p011906 Quercus lobata HOM05D000003 ORTHO05D000126 8.7e-06 55.5 63 39.7
TPR.G16107 Trifolium pratense HOM05D000003 ORTHO05D000126 8.7e-06 55.5 65 36.9
TPR.G36487 Trifolium pratense HOM05D000003 ORTHO05D000126 8.7e-06 55.5 67 37.3


User provided reference genes

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