Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G001800 Carya illinoinensis HOM05D006324 ORTHO05D007463 1.2e-103 379.8 187 100.0
Haze_03172 Corylus avellana HOM05D006324 ORTHO05D007463 8.2e-76 287.3 189 78.3
CiPaw.13G007100 Carya illinoinensis HOM05D006324 ORTHO05D007463 2.0e-74 282.7 183 76.5
QL04p008819 Quercus lobata HOM05D006324 ORTHO05D007463 4.7e-71 271.6 198 72.2
TAR633G2637 Trochodendron aralioides HOM05D006324 ORTHO05D007463 9.7e-61 237.3 188 66.0
Potri.001G263800 Populus trichocarpa HOM05D006324 ORTHO05D007463 2.4e-59 232.6 187 64.2
Thecc.09G178400 Theobroma cacao HOM05D006324 ORTHO05D007463 1.2e-58 230.3 185 64.3
Sabra16G0162000 Salix brachista HOM05D006324 ORTHO05D007463 2.0e-58 229.6 189 62.4
GSVIVG01032154001 Vitis vinifera HOM05D006324 ORTHO05D007463 4.5e-58 228.4 185 64.3
Duzib133G0472 Durio zibethinus HOM05D006324 ORTHO05D007463 2.2e-57 226.1 185 62.2
TWI74G1214 Tripterygium wilfordii HOM05D006324 ORTHO05D007463 2.2e-57 226.1 187 64.2
MD02G1307800 Malus domestica HOM05D006324 ORTHO05D007463 3.8e-57 225.3 186 62.9
Dinv09327 Davidia involucrata HOM05D006324 ORTHO05D007463 1.9e-56 223.0 187 61.0
Gorai.008G105500 Gossypium raimondii HOM05D006324 ORTHO05D007463 5.5e-56 221.5 185 62.2
Gohir.A12G094300 Gossypium hirsutum HOM05D006324 ORTHO05D007463 2.7e-55 219.2 185 61.6
Prupe.2G019000 Prunus persica HOM05D006324 ORTHO05D007463 8.0e-55 217.6 186 61.8
Gohir.D12G097000 Gossypium hirsutum HOM05D006324 ORTHO05D007463 1.0e-54 217.2 185 61.1
Prupe.2G017700 Prunus persica HOM05D006324 ORTHO05D007463 1.8e-54 216.5 186 61.3
PGR031G0767 Punica granatum HOM05D006324 ORTHO05D007463 3.0e-54 215.7 187 64.2
Eucgr.G03365 Eucalyptus grandis HOM05D006324 ORTHO05D007463 4.0e-54 215.3 187 60.4
Manes.07G007700 Manihot esculenta HOM05D006324 ORTHO05D007463 5.2e-54 214.9 187 62.0
RcHm_v2.0_Chr1g0317051 Rosa chinensis HOM05D006324 ORTHO05D007463 2.6e-53 212.6 186 60.2
MD07G1017800 Malus domestica HOM05D006324 ORTHO05D007463 5.7e-53 211.5 186 59.7
Nn7g36262 Nelumbo nucifera HOM05D006324 ORTHO05D007463 7.5e-53 211.1 187 58.3
Sed0027296 Sechium edule HOM05D006324 ORTHO05D007463 7.5e-53 211.1 185 60.0
Cpa.g.sc12.280 Carica papaya HOM05D006324 ORTHO05D007463 1.3e-52 210.3 187 59.9
FAN06G0074 Fragaria x ananassa HOM05D006324 ORTHO05D007463 4.8e-52 208.4 189 57.7
FAN01G1980 Fragaria x ananassa HOM05D006324 ORTHO05D007463 8.3e-52 207.6 190 60.0
COL.COLO4_24418 Corchorus olitorius HOM05D006324 ORTHO05D007463 1.4e-51 206.8 166 65.1
CsaV3_7G030870 Cucumis sativus L. HOM05D006324 ORTHO05D007463 2.4e-51 206.1 185 57.3
Glyma.09G227600 Glycine max HOM05D006324 ORTHO05D007463 2.4e-51 206.1 176 59.1
MELO3C023574.2 Cucumis melo HOM05D000009 ORTHO05D007463 3.1e-51 205.7 185 57.8
FvH4_7g01340 Fragaria vesca HOM05D006324 ORTHO05D007463 3.1e-51 205.7 186 58.6
Glyma.12G009100 Glycine max HOM05D006324 ORTHO05D007463 3.1e-51 205.7 176 59.7
Peaxi162Scf00019g00017 Petunia axillaris HOM05D006324 ORTHO05D007463 2.0e-50 203.0 187 59.4
Oeu049007.1 Olea europaea HOM05D006324 ORTHO05D007463 5.9e-50 201.4 185 56.2
CANSAT80G0022 Cannabis sativa HOM05D006324 ORTHO05D007463 1.0e-49 200.7 190 57.9
VMungo0464G1625 Vigna mungo HOM05D006324 ORTHO05D007463 1.0e-49 200.7 188 58.0
Peaxi162Scf00071g01141 Petunia axillaris HOM05D006324 ORTHO05D007463 1.7e-49 199.9 191 56.5
Nitab4.5_0005981g0020 Nicotiana tabacum HOM05D006324 ORTHO05D007463 2.2e-49 199.5 187 58.8
Solyc01g087550.3 Solanum lycopersicum HOM05D006324 ORTHO05D007463 3.8e-49 198.7 187 56.1
Sopen01g034520 Solanum pennellii HOM05D006324 ORTHO05D007463 5.0e-49 198.4 187 56.1
Lalb_Chr01g0000431 Lupinus albus HOM05D006324 ORTHO05D007463 1.1e-48 197.2 187 55.6
Ah.10g038740 Amaranthus hybridus HOM05D006324 ORTHO05D007463 2.5e-48 196.1 185 56.2
FAN03G2871 Fragaria x ananassa HOM05D006324 ORTHO05D007463 2.5e-48 196.1 186 58.1
CSS0038258 Camellia sinensis var. sinensis HOM05D006324 ORTHO05D007463 7.2e-48 194.5 177 55.4
PGSC0003DMG401006791 Solanum tuberosum HOM05D006324 ORTHO05D007463 7.2e-48 194.5 187 55.1
CAN.G219.51 Capsicum annuum HOM05D006324 ORTHO05D007463 1.6e-47 193.4 187 56.1
TWI53G0677 Tripterygium wilfordii HOM05D006324 ORTHO05D007463 1.6e-47 193.4 180 58.9
Nitab4.5_0000707g0250 Nicotiana tabacum HOM05D006324 ORTHO05D007463 3.6e-47 192.2 187 57.2
arahy.Tifrunner.gnm1.ann1.Q955DD Arachis hypogaea HOM05D006324 ORTHO05D007463 4.7e-47 191.8 192 55.2
arahy.Tifrunner.gnm1.ann1.N2H6V0 Arachis hypogaea HOM05D006324 ORTHO05D007463 6.1e-47 191.4 192 55.2
Sc16g0002910 Simmondsia chinensis HOM05D006324 ORTHO05D007463 8.0e-47 191.0 175 57.1
MSTRG.17017 Avicennia marina HOM05D006324 ORTHO05D007463 2.3e-46 189.5 188 55.3
EL10Ac2g04346 Beta vulgaris HOM05D006324 ORTHO05D007463 1.2e-45 187.2 184 54.9
Hund18591 Selenicereus undatus HOM05D006324 ORTHO05D007463 1.2e-45 187.2 186 52.7
AUR62023082 Chenopodium quinoa HOM05D006324 ORTHO05D007463 1.5e-45 186.8 183 57.4
Lj3g0011240 Lotus japonicus HOM05D006324 ORTHO05D007463 2.0e-45 186.4 193 54.4
Lj3g0003899 Lotus japonicus HOM05D006324 ORTHO05D007463 2.6e-45 186.0 194 54.1
Rhsim07G0057200 Rhododendron simsii HOM05D006324 ORTHO05D007463 2.6e-45 186.0 176 56.8
AUR62009399 Chenopodium quinoa HOM05D006324 ORTHO05D007463 5.7e-45 184.9 184 54.9
Phvul.004G011500 Phaseolus vulgaris HOM05D006324 ORTHO05D007463 5.7e-45 184.9 182 56.6
Hma1.2p1_1328F.1_g275960 Hydrangea macrophylla HOM05D006324 ORTHO05D007463 7.5e-45 184.5 210 49.0
Aqoxy5G04067 Aquilegia oxysepala HOM05D006324 ORTHO05D007463 1.3e-44 183.7 213 48.4
Ca_14667_v3 Cicer arietinum L. HOM05D006324 ORTHO05D007463 1.3e-44 183.7 188 56.4
vmacro13685 Vaccinium macrocarpon HOM05D006324 ORTHO05D007463 4.9e-44 181.8 169 57.4
Lj9C638G12 Lonicera japonica HOM05D006324 ORTHO05D007463 6.3e-44 181.4 234 44.9
Cc02_g28340 Coffea canephora HOM05D006324 ORTHO05D007463 8.3e-44 181.0 185 50.3
AL6G20110 Arabidopsis lyrata HOM05D006324 ORTHO05D007463 3.1e-43 179.1 176 56.8
Dinv43416 Davidia involucrata HOM05D006324 ORTHO05D007463 9.1e-43 177.6 157 59.9
Medtr0085s0010 Medicago truncatula HOM05D006324 ORTHO05D007463 1.2e-42 177.2 191 51.8
MSTRG.20569 Avicennia marina HOM05D006324 ORTHO05D007463 5.9e-42 174.9 175 52.0
AT5G09680 Arabidopsis thaliana HOM05D006324 ORTHO05D007463 7.7e-42 174.5 180 55.6
ECA248G0404 Erigeron canadensis HOM05D000636 ORTHO05D002338 7.7e-42 174.5 181 53.6
DCAR_023954 Daucus carota HOM05D006324 ORTHO05D007463 1.0e-41 174.1 178 53.9
SalBow6G4289 Salvia bowleyana HOM05D006324 ORTHO05D007463 1.7e-41 173.3 186 51.1
Migut.O00526 Erythranthe guttata HOM05D006324 ORTHO05D007463 1.1e-40 170.6 185 51.9
Migut.N01783 Erythranthe guttata HOM05D006324 ORTHO05D007463 7.2e-40 167.9 185 51.4
Carub.0004s0655 Capsella rubella HOM05D006324 ORTHO05D007463 2.1e-39 166.4 174 52.3
HanXRQChr12g0357631 Helianthus annuus HOM05D006324 ORTHO05D007463 2.1e-39 166.4 179 52.0
MBI04_g17676_MAGBIO Magnolia biondii HOM05D006324 ORTHO05D007463 2.1e-39 166.4 162 51.2
Ciclev10032828m.g Citrus clementina HOM05D006324 ORTHO05D007463 2.8e-39 166.0 176 54.0
Lj9C636G13 Lonicera japonica HOM05D006324 ORTHO05D007463 3.6e-39 165.6 222 44.6
SGA_v2.0_scaffold119G32747 Striga asiatica HOM05D006324 ORTHO05D007463 4.7e-39 165.2 204 48.5
Aa31LG3G17390 Aethionema arabicum HOM05D006324 ORTHO05D007463 6.1e-39 164.9 119 69.7
Sp6g33690 Schrenkiella parvula HOM05D006324 ORTHO05D007463 6.1e-39 164.9 173 52.0
Lsat_1_v5_gn_1_105261 Lactuca sativa HOM05D006324 ORTHO05D007463 1.8e-38 163.3 179 49.2
CARHR203710 Cardamine hirsuta HOM05D006324 ORTHO05D007463 2.3e-38 162.9 173 52.0
Carub.0008s1534 Capsella rubella HOM05D006324 ORTHO05D007463 3.0e-38 162.5 174 51.1
ATR0618G422 Amborella trichopoda HOM05D006324 ORTHO05D007463 4.0e-38 162.2 208 44.7
BcaB05g21537 Brassica carinata HOM05D006324 ORTHO05D007463 4.0e-38 162.2 175 52.0
FAN10G1589 Fragaria x ananassa HOM05D006324 ORTHO05D007463 8.9e-38 161.0 198 49.5
Thhalv10014674m.g Eutrema salsugineum HOM05D006324 ORTHO05D007463 1.2e-37 160.6 174 54.0
BraA02t04996Z Brassica rapa HOM05D006324 ORTHO05D007463 2.0e-37 159.8 175 53.7
Atru.chr11.2585 Acer truncatum HOM05D006324 ORTHO05D007463 1.3e-36 157.1 182 49.5
unitig_8.g3776 Utricularia gibba HOM05D006324 ORTHO05D007463 2.2e-36 156.4 183 46.4
BcaC03g13270 Brassica carinata HOM05D006324 ORTHO05D007463 1.4e-35 153.7 174 48.9
C02p04000 Brassica napus HOM05D006324 ORTHO05D007463 1.4e-35 153.7 174 48.9
BolC2t06362H Brassica oleracea HOM05D006324 ORTHO05D007463 1.4e-35 153.7 174 48.9
A10p27710 Brassica napus HOM05D000446 ORTHO05D000321 1.8e-35 153.3 173 49.7
BraA10t44823Z Brassica rapa HOM05D000446 ORTHO05D000321 1.8e-35 153.3 173 48.6
BcaB08g37192 Brassica carinata HOM05D000446 ORTHO05D000321 4.1e-35 152.1 173 49.1
C09p67800 Brassica napus HOM05D000446 ORTHO05D000321 4.1e-35 152.1 173 49.1
BolC9t59542H Brassica oleracea HOM05D000446 ORTHO05D000321 4.1e-35 152.1 173 49.1
ClCG09G003970 Citrullus lanatus HOM05D006324 ORTHO05D007463 1.2e-34 150.6 111 65.8
A02p00110 Brassica napus HOM05D006324 ORTHO05D007463 5.9e-34 148.3 202 46.0
Os07g0232200 Oryza sativa ssp. japonica HOM05D006324 ORTHO05D007463 3.0e-33 146.0 181 48.1
SEGI_35641 Sequoiadendron giganteum HOM05D006324 ORTHO05D007463 5.0e-33 145.2 181 43.1
Zm00001eb095000 Zea mays HOM05D006324 ORTHO05D007463 1.6e-31 140.2 163 45.4
BcaB08g37153 Brassica carinata HOM05D006324 ORTHO05D007463 2.1e-31 139.8 121 57.9
HPP92_005467 Vanilla planifolia HOM05D006324 ORTHO05D007463 8.9e-30 134.4 98 63.3
MBI02_g23139_MAGBIO Magnolia biondii HOM05D006324 ORTHO05D007463 2.6e-29 132.9 158 46.8
HanXRQChr01g0015801 Helianthus annuus HOM05D006324 ORTHO05D007463 7.0e-27 124.8 145 49.0
SMO331G0043 Selaginella moellendorffii HOM05D006324 ORTHO05D007463 2.0e-26 123.2 74 68.9
Psat0s1243g0040 Pisum sativum HOM05D006324 ORTHO05D007463 1.5e-24 117.1 143 51.0
Mapoly0022s0092 Marchantia polymorpha HOM05D006324 ORTHO05D007463 1.9e-24 116.7 90 58.9
Pp3c20_23480 Physcomitrium patens HOM05D006324 ORTHO05D007463 2.5e-24 116.3 77 70.1
AUR62027968 Chenopodium quinoa HOM05D006324 ORTHO05D007463 2.8e-23 112.8 59 79.7
Aa31sc1834G10 Aethionema arabicum HOM05D006324 ORTHO05D007463 6.2e-23 111.7 59 81.4
Nitab4.5_0000087g0020 Nicotiana tabacum HOM05D006324 ORTHO05D007463 2.3e-22 109.8 149 47.7
CBR_g29320 Chara braunii HOM05D006324 ORTHO05D007463 8.9e-22 107.8 76 60.5
SHI04081 Sapria himalayana HOM05D006324 ORTHO05D007463 1.2e-21 107.5 75 65.3
Cre13.g574800 Chlamydomonas reinhardtii HOM05D006324 ORTHO05D007463 8.3e-20 101.3 93 54.8
CDE02G1674 Ceratophyllum demersum HOM05D006324 ORTHO05D007463 3.2e-19 99.4 180 35.6
AagrBONN_evm.TU.Sc2ySwM_344.4124 Anthoceros agrestis HOM05D006324 ORTHO05D007463 2.1e-18 96.7 101 44.6
MCO04G106 Micromonas commoda HOM05D006324 ORTHO05D007463 1.9e-16 90.1 72 54.2
AUR62032791 Chenopodium quinoa HOM05D000001 ORTHO05D000501 3.1e-14 82.8 49 71.4
PRCOL_00001468 Prasinoderma coloniale HOM05D006324 ORTHO05D007463 1.3e-12 77.4 72 51.4
AagrBONN_evm.TU.Sc2ySwM_117.1159 Anthoceros agrestis HOM05D006324 ORTHO05D007463 1.6e-10 70.5 45 71.1
AUR62042252 Chenopodium quinoa HOM05D006324 ORTHO05D007463 8.6e-09 64.7 34 82.4
Cfa026803 Carpinus fangiana HOM05D006324 ORTHO05D007463 4.7e-07 58.9 79 39.2


User provided reference genes

Program Settings