Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 2.9e-105 385.2 187 100.0
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 2.1e-92 342.4 187 89.3
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 2.8e-92 342.0 186 88.7
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 4.1e-91 338.2 187 88.2
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 2.5e-88 328.9 186 83.9
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 5.5e-88 327.8 185 84.3
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 1.6e-87 326.2 186 84.9
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 3.9e-86 321.6 187 84.5
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 6.7e-86 320.9 187 83.4
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 8.7e-86 320.5 186 83.9
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 1.1e-85 320.1 183 83.1
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 1.9e-85 319.3 186 83.3
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 1.9e-85 319.3 186 83.3
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 1.9e-85 319.3 178 85.4
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 3.3e-85 318.5 186 81.7
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 3.3e-85 318.5 178 85.4
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 9.7e-85 317.0 186 82.3
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 1.3e-84 316.6 187 82.4
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 2.2e-84 315.8 188 80.9
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 2.8e-84 315.5 186 81.7
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 4.8e-84 314.7 180 82.2
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 4.8e-84 314.7 188 80.3
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 6.3e-84 314.3 164 89.6
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 6.3e-84 314.3 185 82.2
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 6.3e-84 314.3 185 82.2
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 8.2e-84 313.9 187 82.4
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 1.1e-83 313.5 184 81.0
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 1.4e-83 313.2 172 84.9
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 1.4e-83 313.2 186 80.6
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 2.4e-83 312.4 187 80.2
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 3.1e-83 312.0 214 74.3
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 4.1e-83 311.6 167 88.6
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 4.1e-83 311.6 187 80.2
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 5.3e-83 311.2 165 88.5
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 1.5e-82 309.7 187 81.3
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 1.5e-82 309.7 187 81.3
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 1.5e-82 309.7 177 84.2
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 2.0e-82 309.3 187 80.7
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 3.4e-82 308.5 187 80.2
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 3.4e-82 308.5 187 80.2
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 4.5e-82 308.1 186 79.6
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 1.0e-81 307.0 172 83.7
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 1.3e-81 306.6 187 80.7
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 2.2e-81 305.8 184 79.9
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 2.9e-81 305.4 179 81.0
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 5.0e-81 304.7 188 79.3
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 8.5e-81 303.9 182 81.3
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 1.1e-80 303.5 185 78.4
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 9.4e-80 300.4 175 81.7
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 9.4e-80 300.4 183 79.2
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 2.7e-79 298.9 186 78.5
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 7.9e-79 297.4 183 77.6
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 1.8e-78 296.2 168 81.0
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 3.0e-78 295.4 162 86.4
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 3.0e-78 295.4 181 79.6
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 3.9e-78 295.0 177 78.5
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 6.7e-78 294.3 170 80.6
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 8.8e-78 293.9 164 85.4
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 2.0e-77 292.7 181 77.9
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 2.0e-77 292.7 176 78.4
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 3.3e-77 292.0 181 79.0
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 5.7e-77 291.2 180 78.3
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 5.7e-77 291.2 170 80.0
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 2.2e-76 289.3 183 74.9
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 2.8e-76 288.9 174 76.4
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 6.3e-76 287.7 176 77.3
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 1.1e-75 287.0 175 77.1
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 1.1e-75 287.0 164 81.7
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 1.4e-75 286.6 178 75.8
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 2.4e-75 285.8 179 76.0
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 3.1e-75 285.4 175 79.4
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 3.1e-75 285.4 175 79.4
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 3.1e-75 285.4 175 79.4
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 4.1e-75 285.0 178 77.5
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 9.1e-75 283.9 181 75.7
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 1.5e-74 283.1 175 78.9
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 4.5e-74 281.6 173 77.5
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 1.0e-73 280.4 173 76.9
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 1.7e-73 279.6 179 77.1
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 2.2e-73 279.3 173 76.9
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 8.5e-73 277.3 176 77.8
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 8.5e-73 277.3 177 75.1
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 8.5e-73 277.3 178 75.8
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 1.9e-72 276.2 176 76.7
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 5.5e-72 274.6 180 75.0
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 1.6e-71 273.1 183 72.1
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 6.1e-71 271.2 178 69.1
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 3.9e-70 268.5 185 72.4
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 3.3e-69 265.4 159 79.2
Actinidia07225 Actinidia chinensis HOM05D006649 ORTHO05D008754 9.7e-69 263.8 196 69.4
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 2.4e-67 259.2 185 67.6
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 3.1e-67 258.8 213 62.4
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 2.0e-61 239.6 168 66.7
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 7.5e-61 237.7 173 65.9
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 1.4e-59 233.4 152 74.3
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 1.2e-58 230.3 176 63.6
CDE08G1146 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 5.9e-58 228.0 177 64.4
ClCG02G022010 Citrullus lanatus HOM05D006649 ORTHO05D008754 5.0e-57 224.9 185 64.9
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 5.0e-57 224.9 130 81.5
Zm00001eb339600 Zea mays HOM05D006649 ORTHO05D008754 6.1e-55 218.0 131 77.1
Zm00001eb382760 Zea mays HOM05D006649 ORTHO05D008754 1.3e-52 210.3 126 77.0
Dinv29440 Davidia involucrata HOM05D006649 ORTHO05D008754 3.5e-50 202.2 117 80.3
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 1.1e-48 197.2 161 60.2
Thhalv10002731m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 4.0e-46 188.7 114 78.1
Ah.15g095620 Amaranthus hybridus HOM05D006649 ORTHO05D008754 2.2e-44 183.0 119 70.6
AL5G22830 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 8.3e-44 181.0 114 73.7
AL5G22760 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 1.8e-43 179.9 114 73.7
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 7.7e-42 174.5 121 74.4
Zm00001eb039610 Zea mays HOM05D006649 ORTHO05D008754 4.3e-40 168.7 113 73.5
Sed0010741 Sechium edule HOM05D006649 ORTHO05D008754 1.6e-39 166.8 108 77.8
Cre14.g632767 Chlamydomonas reinhardtii HOM05D006649 ORTHO05D008754 2.8e-39 166.0 181 48.6
SEGI_31986 Sequoiadendron giganteum HOM05D006649 ORTHO05D008754 2.8e-39 166.0 109 69.7
PRCOL_00004711 Prasinoderma coloniale HOM05D006649 ORTHO05D008754 5.2e-38 161.8 180 46.7
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 3.6e-23 112.5 169 37.3
Thhalv10003008m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 9.2e-19 97.8 62 75.8
CDE06G0522 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 1.6e-15 87.0 55 72.7
Mapoly0054s0048 Marchantia polymorpha HOM05D006649 ORTHO05D023509 2.0e-13 80.1 169 29.6
Pp3c1_29030 Physcomitrium patens HOM05D006649 ORTHO05D023509 9.9e-13 77.8 178 28.1
GSVIVG01023086001 Vitis vinifera HOM05D006649 ORTHO05D008754 1.1e-11 74.3 63 58.7
CBR_g19487 Chara braunii HOM05D006649 ORTHO05D023509 7.1e-11 71.6 170 27.1
AT3G44485 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 1.8e-06 57.0 60 53.3


User provided reference genes

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