Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G069500 Carya illinoinensis HOM05D005631 ORTHO05D006765 4.0e-64 248.1 134 100.0
Cfa011776 Carpinus fangiana HOM05D005631 ORTHO05D006765 1.5e-42 176.4 106 88.7
QL01p026260 Quercus lobata HOM05D005631 ORTHO05D006765 1.2e-39 166.8 106 85.8
Thecc.09G357600 Theobroma cacao HOM05D005631 ORTHO05D006765 1.7e-38 162.9 106 84.0
Actinidia23857 Actinidia chinensis HOM05D005631 ORTHO05D006765 6.4e-38 161.0 106 84.9
Duzib150G1412 Durio zibethinus HOM05D005631 ORTHO05D006765 1.2e-36 156.8 122 73.0
CSS0000896 Camellia sinensis var. sinensis HOM05D005631 ORTHO05D006765 1.6e-36 156.4 106 82.1
Gohir.A03G025600 Gossypium hirsutum HOM05D005631 ORTHO05D006765 1.7e-35 152.9 106 77.4
Gohir.D03G142900 Gossypium hirsutum HOM05D005631 ORTHO05D006765 1.7e-35 152.9 106 77.4
Gorai.003G150100 Gossypium raimondii HOM05D005631 ORTHO05D006765 1.7e-35 152.9 106 77.4
ClCG02G019260 Citrullus lanatus HOM05D005631 ORTHO05D006765 5.0e-35 151.4 106 78.3
MELO3C025697.2 Cucumis melo HOM05D005631 ORTHO05D006765 1.5e-34 149.8 106 79.2
CsaV3_6G015890 Cucumis sativus L. HOM05D005631 ORTHO05D006765 4.3e-34 148.3 106 78.3
GSVIVG01033331001 Vitis vinifera HOM05D005631 ORTHO05D006765 4.3e-34 148.3 104 76.9
SGA_v2.0_scaffold18G08260 Striga asiatica HOM05D005631 ORTHO05D006765 5.6e-34 147.9 106 76.4
Actinidia34479 Actinidia chinensis HOM05D005631 ORTHO05D006765 7.3e-34 147.5 105 79.0
RcHm_v2.0_Chr5g0071621 Rosa chinensis HOM05D005631 ORTHO05D006765 7.3e-34 147.5 106 76.4
Cpa.g.sc2.358 Carica papaya HOM05D005631 ORTHO05D006765 9.5e-34 147.1 107 74.8
Prupe.6G048500 Prunus persica HOM05D005631 ORTHO05D006765 9.5e-34 147.1 106 76.4
Rhsim01G0240900 Rhododendron simsii HOM05D005631 ORTHO05D006765 9.5e-34 147.1 108 80.6
Hma1.2p1_1586F.1_g292190 Hydrangea macrophylla HOM05D005631 ORTHO05D006765 1.2e-33 146.7 106 78.3
CANSAT54G1076 Cannabis sativa HOM05D005631 ORTHO05D006765 2.1e-33 146.0 106 75.5
Manes.02G211700 Manihot esculenta HOM05D005631 ORTHO05D006765 2.1e-33 146.0 106 76.4
Lalb_Chr15g0083281 Lupinus albus HOM05D005631 ORTHO05D006765 2.8e-33 145.6 107 77.6
MD03G1056300 Malus domestica HOM05D005631 ORTHO05D006765 2.8e-33 145.6 106 76.4
DCAR_004046 Daucus carota HOM05D005631 ORTHO05D006765 4.7e-33 144.8 106 75.5
FvH4_3g39740 Fragaria vesca HOM05D005631 ORTHO05D006765 6.2e-33 144.4 106 75.5
FAN11G1428 Fragaria x ananassa HOM05D005631 ORTHO05D006765 6.2e-33 144.4 106 75.5
FAN16G0042 Fragaria x ananassa HOM05D005631 ORTHO05D006765 6.2e-33 144.4 106 75.5
Potri.013G152600 Populus trichocarpa HOM05D005631 ORTHO05D006765 6.2e-33 144.4 106 73.6
Sabra13G0122700 Salix brachista HOM05D005631 ORTHO05D006765 6.2e-33 144.4 106 73.6
Sed0015217 Sechium edule HOM05D005631 ORTHO05D006765 6.2e-33 144.4 106 76.4
FAN21G1424 Fragaria x ananassa HOM05D005631 ORTHO05D006765 3.1e-32 142.1 106 74.5
HPP92_019076 Vanilla planifolia HOM05D005631 ORTHO05D006765 4.0e-32 141.7 106 72.6
ATR0304G021 Amborella trichopoda HOM05D005631 ORTHO05D006765 8.9e-32 140.6 106 72.6
CDE09G1253 Ceratophyllum demersum HOM05D001009 ORTHO05D000829 1.5e-31 139.8 105 71.4
Atru.chr3.4122 Acer truncatum HOM05D005631 ORTHO05D006765 2.6e-31 139.0 98 78.6
MD11G1057500 Malus domestica HOM05D005631 ORTHO05D006765 3.4e-31 138.7 106 73.6
Lsat_1_v5_gn_6_47101 Lactuca sativa HOM05D005631 ORTHO05D006765 4.4e-31 138.3 106 69.8
Phvul.006G073900 Phaseolus vulgaris HOM05D005631 ORTHO05D006765 4.4e-31 138.3 107 73.8
Migut.H00695 Erythranthe guttata HOM05D005631 ORTHO05D006765 5.8e-31 137.9 106 71.7
Glyma.18G057300 Glycine max HOM05D005631 ORTHO05D006765 5.8e-31 137.9 107 73.8
Medtr3g465690 Medicago truncatula HOM05D005631 ORTHO05D006765 7.5e-31 137.5 107 73.8
Ca_15008_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 1.3e-30 136.7 107 72.9
Ca_15010_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 1.3e-30 136.7 107 72.9
PGR102G0278 Punica granatum HOM05D005631 ORTHO05D006765 1.3e-30 136.7 107 74.8
vmacro14621 Vaccinium macrocarpon HOM05D005631 ORTHO05D006765 1.7e-30 136.3 109 74.3
Glyma.11G164100 Glycine max HOM05D005631 ORTHO05D006765 2.9e-30 135.6 107 72.9
Oeu059694.1 Olea europaea HOM05D005631 ORTHO05D006765 2.9e-30 135.6 106 70.8
FAN25G2299 Fragaria x ananassa HOM05D005631 ORTHO05D006765 4.9e-30 134.8 106 71.7
SGA_v2.0_scaffold20G09058 Striga asiatica HOM05D005631 ORTHO05D006765 8.3e-30 134.0 111 72.1
TAR633G1157 Trochodendron aralioides HOM05D005631 ORTHO05D006765 1.4e-29 133.3 106 71.7
HanXRQChr10g0284941 Helianthus annuus HOM05D005631 ORTHO05D006765 1.9e-29 132.9 106 68.9
PSO349G0142 Papaver somniferum HOM05D005631 ORTHO05D006765 1.9e-29 132.9 106 72.6
Ciclev10029319m.g Citrus clementina HOM05D005631 ORTHO05D006765 2.4e-29 132.5 104 75.0
TPR.G25706 Trifolium pratense HOM05D005631 ORTHO05D006765 2.4e-29 132.5 107 72.9
Eucgr.B04002 Eucalyptus grandis HOM05D005631 ORTHO05D006765 4.1e-29 131.7 107 70.1
Nn1g05206 Nelumbo nucifera HOM05D005631 ORTHO05D006765 4.1e-29 131.7 106 74.5
SalBow1G1570 Salvia bowleyana HOM05D005631 ORTHO05D006765 9.2e-29 130.6 106 69.8
Hund18954 Selenicereus undatus HOM05D000127 ORTHO05D006765 2.0e-28 129.4 106 66.0
Sabra06G0125700 Salix brachista HOM05D005631 ORTHO05D006765 6.0e-28 127.9 106 67.9
MSTRG.2645 Avicennia marina HOM05D005631 ORTHO05D006765 1.0e-27 127.1 106 67.0
Lj6g0005877 Lotus japonicus HOM05D005631 ORTHO05D006765 1.3e-27 126.7 107 73.8
Psat5g026160 Pisum sativum HOM05D005631 ORTHO05D006765 3.9e-27 125.2 107 71.0
Nitab4.5_0003548g0030 Nicotiana tabacum HOM05D005631 ORTHO05D006765 1.1e-26 123.6 106 67.9
arahy.Tifrunner.gnm1.ann1.7E53FC Arachis hypogaea HOM05D005631 ORTHO05D006765 3.3e-26 122.1 107 70.1
arahy.Tifrunner.gnm1.ann1.I7JS5F Arachis hypogaea HOM05D005631 ORTHO05D006765 7.3e-26 120.9 97 72.2
PGSC0003DMG400022531 Solanum tuberosum HOM05D005631 ORTHO05D006765 9.5e-26 120.6 106 66.0
Solyc03g033480.4 Solanum lycopersicum HOM05D005631 ORTHO05D006765 1.2e-25 120.2 106 66.0
Sopen03g006230 Solanum pennellii HOM05D005631 ORTHO05D006765 1.2e-25 120.2 106 66.0
AUR62001872 Chenopodium quinoa HOM05D005631 ORTHO05D006765 2.8e-25 119.0 106 63.2
AUR62009671 Chenopodium quinoa HOM05D005631 ORTHO05D006765 3.6e-25 118.6 106 63.2
Nitab4.5_0000438g0150 Nicotiana tabacum HOM05D005631 ORTHO05D006765 1.4e-24 116.7 106 67.0
THA.LOC104810692 Tarenaya hassleriana HOM05D005631 ORTHO05D006765 1.4e-24 116.7 107 64.5
CAN.G354.39 Capsicum annuum HOM05D005631 ORTHO05D006765 1.8e-24 116.3 107 66.4
BcaC04g19866 Brassica carinata HOM05D005631 ORTHO05D006765 2.3e-24 115.9 107 62.6
A10p15820 Brassica napus HOM05D005631 ORTHO05D006765 2.3e-24 115.9 107 62.6
BolC9t57889H Brassica oleracea HOM05D005631 ORTHO05D006765 2.3e-24 115.9 107 62.6
C09p50330 Brassica napus HOM05D005631 ORTHO05D006765 4.0e-24 115.2 107 61.7
Carub.0007s3232 Capsella rubella HOM05D005631 ORTHO05D006765 4.0e-24 115.2 107 59.8
A03p12230 Brassica napus HOM05D005631 ORTHO05D006765 5.2e-24 114.8 107 61.7
C03p14340 Brassica napus HOM05D005631 ORTHO05D006765 5.2e-24 114.8 107 61.7
BraA03t10534Z Brassica rapa HOM05D005631 ORTHO05D006765 5.2e-24 114.8 107 61.7
BraA10t43643Z Brassica rapa HOM05D005631 ORTHO05D006765 5.2e-24 114.8 107 61.7
Sc21g0005270 Simmondsia chinensis HOM05D005631 ORTHO05D006765 8.9e-24 114.0 107 60.7
AT5G37055 Arabidopsis thaliana HOM05D005631 ORTHO05D006765 1.2e-23 113.6 107 61.7
BcaB08g36180 Brassica carinata HOM05D005631 ORTHO05D006765 1.2e-23 113.6 107 61.7
Sp6g20150 Schrenkiella parvula HOM05D000127 ORTHO05D007184 1.5e-23 113.2 99 63.6
AL7G45820 Arabidopsis lyrata HOM05D005631 ORTHO05D006765 2.0e-23 112.8 107 60.7
Os03g0367800 Oryza sativa ssp. japonica HOM05D005631 ORTHO05D006765 2.6e-23 112.5 106 61.3
CARHR272280 Cardamine hirsuta HOM05D005631 ORTHO05D006765 4.4e-23 111.7 105 62.9
Thhalv10014837m.g Eutrema salsugineum HOM05D005631 ORTHO05D006765 5.8e-23 111.3 107 61.7
Aa31LG11G240 Aethionema arabicum HOM05D000127 ORTHO05D007184 9.8e-23 110.5 108 59.3
Zm00001eb195120 Zea mays HOM05D005631 ORTHO05D006765 9.8e-23 110.5 105 60.0
VMungo1383G2760 Vigna mungo HOM05D005631 ORTHO05D006765 1.7e-22 109.8 85 74.1
BolC3t13878H Brassica oleracea HOM05D005631 ORTHO05D006765 8.3e-22 107.5 107 57.0
BcaB01g04521 Brassica carinata HOM05D005631 ORTHO05D006765 3.2e-21 105.5 98 63.3
Cc07_g10850 Coffea canephora HOM05D005631 ORTHO05D006765 3.2e-21 105.5 108 59.3
ECA248G0403 Erigeron canadensis HOM05D005631 ORTHO05D006765 4.1e-21 105.1 110 60.9
Oeu059678.1 Olea europaea HOM05D005631 ORTHO05D006765 7.8e-20 100.9 106 57.5
unitig_899.g14680 Utricularia gibba HOM05D005631 ORTHO05D006765 2.3e-19 99.4 106 57.5
EL10Ac7g15917 Beta vulgaris HOM05D005631 ORTHO05D006765 5.1e-19 98.2 69 73.9
COL.COLO4_11152 Corchorus olitorius HOM05D005631 ORTHO05D006765 8.6e-19 97.4 71 76.1
Mapoly0066s0110 Marchantia polymorpha HOM05D005631 ORTHO05D006765 1.1e-18 97.1 112 50.9
Sabra19G0122200 Salix brachista HOM05D005631 ORTHO05D006765 1.1e-18 97.1 115 53.0
Sabra16G0029400 Salix brachista HOM05D005631 ORTHO05D006765 1.5e-18 96.7 115 53.9
Aqoxy1G01288 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 3.3e-18 95.5 102 65.7
VMungo0540G1856 Vigna mungo HOM05D005631 ORTHO05D006765 7.3e-18 94.4 72 76.4
SEGI_31870 Sequoiadendron giganteum HOM05D005631 ORTHO05D006765 1.1e-16 90.5 72 63.9
MBI18_g07568_MAGBIO Magnolia biondii HOM05D005631 ORTHO05D006765 5.2e-16 88.2 68 69.1
Oeu008095.1 Olea europaea HOM05D005631 ORTHO05D006765 5.2e-16 88.2 69 66.7
Pp3c4_18980 Physcomitrium patens HOM05D005631 ORTHO05D006765 9.9e-15 84.0 108 50.0
CDE02G1786 Ceratophyllum demersum HOM05D005631 ORTHO05D006765 2.4e-13 79.3 105 49.5
Sabra07G0096200 Salix brachista HOM05D005274 ORTHO05D006765 1.2e-12 77.0 97 53.6
SMO134G0149 Selaginella moellendorffii HOM05D005631 ORTHO05D006765 1.6e-12 76.6 110 48.2
BcaC09g51457 Brassica carinata HOM05D005631 ORTHO05D006765 2.1e-12 76.3 61 62.3
A08p25520 Brassica napus HOM05D005631 ORTHO05D006765 4.6e-12 75.1 61 62.3
BolC1t05347H Brassica oleracea HOM05D005631 ORTHO05D006765 1.7e-11 73.2 61 59.0
Sabra02G0153300 Salix brachista HOM05D005631 ORTHO05D006765 1.7e-11 73.2 67 67.2
Sabra19G0131600 Salix brachista HOM05D005631 ORTHO05D006765 3.0e-11 72.4 95 50.5
BcaC08g44597 Brassica carinata HOM05D005631 ORTHO05D006765 5.1e-11 71.6 62 61.3
BcaC05g26847 Brassica carinata HOM05D005631 ORTHO05D006765 8.6e-11 70.9 94 44.7
BcaC09g51408 Brassica carinata HOM05D005631 ORTHO05D006765 1.5e-10 70.1 61 57.4
A07p13430 Brassica napus HOM05D005631 ORTHO05D006765 2.5e-10 69.3 61 60.7
Cc05_g02510 Coffea canephora HOM05D005631 ORTHO05D006765 2.5e-10 69.3 109 47.7
Sabra04G0079400 Salix brachista HOM05D005631 ORTHO05D006765 4.7e-09 65.1 71 53.5
Sabra08G0141900 Salix brachista HOM05D000225 ORTHO05D002520 1.1e-08 63.9 71 53.5
CBR_g4734 Chara braunii HOM05D005631 ORTHO05D006765 1.8e-08 63.2 101 44.6
Atru.chr3.4121 Acer truncatum HOM05D005631 ORTHO05D006765 5.2e-08 61.6 96 47.9
Sabra15G0067400 Salix brachista HOM05D003748 ORTHO05D004108 1.2e-07 60.5 82 46.3
C01p12950 Brassica napus HOM05D005631 ORTHO05D006765 2.6e-07 59.3 43 72.1
C04p57300 Brassica napus HOM05D005631 ORTHO05D006765 4.4e-07 58.5 43 72.1
Aqoxy1G01289 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 7.6e-07 57.8 50 70.0
C01p13430 Brassica napus HOM05D005631 ORTHO05D006765 9.9e-07 57.4 43 69.8
BcaC02g08205 Brassica carinata HOM05D005631 ORTHO05D006765 3.8e-06 55.5 48 56.2


User provided reference genes

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