Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G067500 Carya illinoinensis HOM05D000782 ORTHO05D000571 1.8e-96 355.9 180 100.0
CiPaw.14G053200 Carya illinoinensis HOM05D000782 ORTHO05D000571 4.8e-65 251.5 178 72.5
Haze_24431 Corylus avellana HOM05D000782 ORTHO05D000571 2.6e-55 219.2 177 65.5
QL01p025713 Quercus lobata HOM05D000782 ORTHO05D000571 4.4e-50 201.8 175 62.9
QL04p095983 Quercus lobata HOM05D000782 ORTHO05D000571 1.8e-48 196.4 175 61.7
QL04p095962 Quercus lobata HOM05D000782 ORTHO05D000571 2.4e-48 196.1 175 61.7
MD11G1060400 Malus domestica HOM05D000782 ORTHO05D000571 1.2e-47 193.7 182 57.7
Prupe.6G045600 Prunus persica HOM05D000782 ORTHO05D000571 2.9e-46 189.1 176 59.1
FvH4_3g39960 Fragaria vesca HOM05D000782 ORTHO05D000571 4.2e-45 185.3 186 55.4
FAN16G3647 Fragaria x ananassa HOM05D000001 ORTHO05D012572 4.2e-45 185.3 186 55.4
Ciclev10002580m.g Citrus clementina HOM05D000782 ORTHO05D000571 5.5e-45 184.9 191 51.8
Duzib168G2101 Durio zibethinus HOM05D000782 ORTHO05D000571 5.5e-45 184.9 180 55.6
RcHm_v2.0_Chr5g0071971 Rosa chinensis HOM05D000782 ORTHO05D000571 5.5e-45 184.9 185 53.0
FAN21G0593 Fragaria x ananassa HOM05D000782 ORTHO05D000571 3.6e-44 182.2 186 54.8
FAN25G1963 Fragaria x ananassa HOM05D000001 ORTHO05D012572 4.7e-44 181.8 186 54.3
Thecc.09G359700 Theobroma cacao HOM05D000782 ORTHO05D000571 1.8e-43 179.9 189 52.9
MD03G1058200 Malus domestica HOM05D000782 ORTHO05D000571 3.0e-43 179.1 177 54.8
COL.COLO4_11173 Corchorus olitorius HOM05D000782 ORTHO05D000571 5.2e-43 178.3 184 53.8
GSVIVG01024611001 Vitis vinifera HOM05D000001 ORTHO05D012572 2.0e-42 176.4 186 53.2
Atru.chr1.2094 Acer truncatum HOM05D000782 ORTHO05D000571 3.3e-42 175.6 183 51.4
TAR369G0987 Trochodendron aralioides HOM05D000782 ORTHO05D000571 9.7e-42 174.1 186 54.3
Sabra19G0130500 Salix brachista HOM05D000782 ORTHO05D000571 3.7e-41 172.2 175 54.9
Gohir.D03G143800 Gossypium hirsutum HOM05D000782 ORTHO05D000571 1.1e-40 170.6 183 53.6
Gorai.003G151100 Gossypium raimondii HOM05D000782 ORTHO05D000571 1.2e-39 167.2 183 53.0
Manes.18G126600 Manihot esculenta HOM05D000782 ORTHO05D000571 1.2e-39 167.2 184 52.2
Psat0s2794g0120 Pisum sativum HOM05D000782 ORTHO05D000571 1.6e-39 166.8 186 49.5
Actinidia32599 Actinidia chinensis HOM05D000782 ORTHO05D000571 5.9e-39 164.9 190 48.9
Glyma.14G200600 Glycine max HOM05D000782 ORTHO05D000571 1.0e-38 164.1 194 48.5
TWI79G1409 Tripterygium wilfordii HOM05D000782 ORTHO05D000571 1.7e-38 163.3 199 50.8
Sabra19G0124100 Salix brachista HOM05D000782 ORTHO05D000571 3.2e-37 159.1 200 47.0
Cpa.g.sc2.336 Carica papaya HOM05D000782 ORTHO05D000571 7.2e-37 157.9 186 46.8
Phvul.008G250800 Phaseolus vulgaris HOM05D000782 ORTHO05D000571 7.2e-37 157.9 192 47.4
Hma1.2p1_1421F.1_g282460 Hydrangea macrophylla HOM05D000782 ORTHO05D000571 2.1e-36 156.4 179 50.8
Medtr5g074550 Medicago truncatula HOM05D000782 ORTHO05D000571 4.7e-36 155.2 181 49.7
Gohir.D08G221000 Gossypium hirsutum HOM05D000782 ORTHO05D000571 1.8e-35 153.3 171 52.6
Gorai.004G234700 Gossypium raimondii HOM05D000782 ORTHO05D000571 1.8e-35 153.3 171 52.6
TPR.G25342 Trifolium pratense HOM05D000782 ORTHO05D000571 1.8e-35 153.3 180 47.2
Lalb_Chr10g0103661 Lupinus albus HOM05D000782 ORTHO05D000571 2.3e-35 152.9 171 51.5
Eucgr.K01367 Eucalyptus grandis HOM05D000782 ORTHO05D000571 3.0e-35 152.5 180 46.7
Aa31LG5G6450 Aethionema arabicum HOM05D002411 ORTHO05D002564 5.2e-35 151.8 169 47.3
VMungo0647G1733 Vigna mungo HOM05D000782 ORTHO05D000571 8.8e-35 151.0 192 45.8
AT2G30270 Arabidopsis thaliana HOM05D000782 ORTHO05D000571 1.5e-34 150.2 168 51.2
CARHR123590 Cardamine hirsuta HOM05D000782 ORTHO05D000571 1.5e-34 150.2 170 50.0
Lj2A1095G46 Lonicera japonica HOM05D000782 ORTHO05D000571 1.5e-34 150.2 180 48.9
Potri.019G126300 Populus trichocarpa HOM05D000782 ORTHO05D000571 2.6e-34 149.4 178 51.7
Carub.0004s1143 Capsella rubella HOM05D000782 ORTHO05D000571 4.4e-34 148.7 168 50.0
Thhalv10017277m.g Eutrema salsugineum HOM05D000782 ORTHO05D000571 4.4e-34 148.7 176 48.9
Sp4g12850 Schrenkiella parvula HOM05D000782 ORTHO05D000571 7.5e-34 147.9 171 48.0
BcaC01g06019 Brassica carinata HOM05D000782 ORTHO05D000571 1.3e-33 147.1 172 47.1
vmacro02905 Vaccinium macrocarpon HOM05D000782 ORTHO05D000571 1.3e-33 147.1 185 46.5
A03p16910 Brassica napus HOM05D000782 ORTHO05D000571 1.7e-33 146.7 174 47.1
AL4G25120 Arabidopsis lyrata HOM05D000782 ORTHO05D000571 2.2e-33 146.4 185 45.9
BraA03t10980Z Brassica rapa HOM05D000782 ORTHO05D000571 2.2e-33 146.4 174 47.1
Migut.N00751 Erythranthe guttata HOM05D000782 ORTHO05D000571 2.2e-33 146.4 184 44.6
C03p19910 Brassica napus HOM05D000782 ORTHO05D000571 3.7e-33 145.6 172 47.1
BolC3t14370H Brassica oleracea HOM05D000782 ORTHO05D000571 3.7e-33 145.6 172 47.1
Nn2g11061 Nelumbo nucifera HOM05D000782 ORTHO05D000571 1.4e-32 143.7 182 45.6
Rhsim13G0062600 Rhododendron simsii HOM05D000782 ORTHO05D000571 1.4e-32 143.7 190 45.8
LjContig00141g0026997 Lotus japonicus HOM05D000782 ORTHO05D000571 1.8e-32 143.3 187 46.0
DCAR_023953 Daucus carota HOM05D000782 ORTHO05D000571 7.0e-32 141.4 194 44.3
ClCG08G003160 Citrullus lanatus HOM05D000782 ORTHO05D000571 7.7e-31 137.9 177 45.2
CSS0014731 Camellia sinensis var. sinensis HOM05D001072 ORTHO05D006807 1.0e-30 137.5 171 49.1
MBI15_g20019_MAGBIO Magnolia biondii HOM05D000782 ORTHO05D000571 1.0e-30 137.5 184 45.1
Sed0021709 Sechium edule HOM05D000782 ORTHO05D000571 3.8e-30 135.6 179 46.4
SalBow2G3499 Salvia bowleyana HOM05D000782 ORTHO05D000571 5.0e-30 135.2 181 45.9
THA.LOC104800764 Tarenaya hassleriana HOM05D000782 ORTHO05D000571 5.0e-30 135.2 179 44.1
MELO3C024977.2 Cucumis melo HOM05D000782 ORTHO05D000571 1.1e-29 134.0 177 44.6
MD17G1185800 Malus domestica HOM05D000782 ORTHO05D000571 1.1e-29 134.0 143 52.4
Medtr5g074560 Medicago truncatula HOM05D000782 ORTHO05D000571 1.5e-29 133.7 175 45.1
PSO170G6702 Papaver somniferum HOM05D000782 ORTHO05D000571 7.2e-29 131.3 181 42.0
ClCG03G000180 Citrullus lanatus HOM05D000782 ORTHO05D000571 9.5e-29 131.0 210 40.0
Oeu050028.1 Olea europaea HOM05D000782 ORTHO05D000571 1.2e-28 130.6 188 38.8
CsaV3_7G022830 Cucumis sativus L. HOM05D000782 ORTHO05D000571 1.6e-28 130.2 177 43.5
Gohir.A03G024700 Gossypium hirsutum HOM05D000782 ORTHO05D000571 2.1e-28 129.8 146 52.7
arahy.Tifrunner.gnm1.ann1.NRMQ9K Arachis hypogaea HOM05D000782 ORTHO05D000571 1.0e-27 127.5 184 41.8
Lsat_1_v5_gn_8_108720 Lactuca sativa HOM05D000782 ORTHO05D000571 2.0e-26 123.2 189 41.3
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 3.7e-25 119.0 149 45.6
CAN.G1095.28 Capsicum annuum HOM05D000782 ORTHO05D000571 3.7e-25 119.0 185 37.3
HanXRQChr11g0339921 Helianthus annuus HOM05D000782 ORTHO05D000571 8.3e-25 117.9 180 43.3
Cc01_g15010 Coffea canephora HOM05D000782 ORTHO05D000571 9.2e-24 114.4 191 38.2
TAR623G0287 Trochodendron aralioides HOM05D000782 ORTHO05D000571 1.2e-23 114.0 143 49.0
Ah.08g215420 Amaranthus hybridus HOM05D000782 ORTHO05D000571 1.6e-23 113.6 183 39.3
TAR623G1242 Trochodendron aralioides HOM05D000782 ORTHO05D000571 2.0e-23 113.2 139 49.6
MSTRG.12694 Avicennia marina HOM05D000782 ORTHO05D000571 2.7e-23 112.8 188 36.7
Dinv12248 Davidia involucrata HOM05D000782 ORTHO05D000571 3.5e-23 112.5 147 45.6
Solyc06g082380.3 Solanum lycopersicum HOM05D000782 ORTHO05D000571 4.5e-23 112.1 189 35.4
ECA236G0449 Erigeron canadensis HOM05D000782 ORTHO05D000571 1.0e-22 110.9 182 40.1
PSO017G2384 Papaver somniferum HOM05D000782 ORTHO05D000571 1.3e-22 110.5 182 40.1
Sopen06g033770 Solanum pennellii HOM05D000782 ORTHO05D000571 1.3e-22 110.5 189 36.0
PGSC0003DMG400030460 Solanum tuberosum HOM05D000782 ORTHO05D000571 1.3e-22 110.5 190 36.3
unitig_22.g5204 Utricularia gibba HOM05D006159 ORTHO05D007624 2.9e-22 109.4 159 37.7
Gohir.A08G203700 Gossypium hirsutum HOM05D000782 ORTHO05D000571 2.5e-21 106.3 133 48.9
AUR62009715 Chenopodium quinoa HOM05D000782 ORTHO05D000571 1.2e-20 104.0 180 36.1
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 3.6e-20 102.4 180 36.1
Glyma.02G233000 Glycine max HOM05D000782 ORTHO05D000571 6.1e-20 101.7 152 41.4
EL10Ac7g15871 Beta vulgaris HOM05D000782 ORTHO05D000571 1.0e-19 100.9 178 35.4
DCAR_028903 Daucus carota HOM05D000782 ORTHO05D000571 2.0e-18 96.7 176 34.7
Ca_05681_v3 Cicer arietinum L. HOM05D000782 ORTHO05D000571 3.4e-18 95.9 154 40.3
CANSAT54G1735 Cannabis sativa HOM05D000782 ORTHO05D000571 9.8e-18 94.4 155 42.6
CSS0016607 Camellia sinensis var. sinensis HOM05D000782 ORTHO05D000571 9.2e-16 87.8 88 55.7
ClCG10G022570 Citrullus lanatus HOM05D000782 ORTHO05D000571 9.2e-16 87.8 177 34.5
Aqoxy4G02166 Aquilegia oxysepala HOM05D000782 ORTHO05D000571 5.9e-15 85.1 148 37.2
Peaxi162Scf00744g00118 Petunia axillaris HOM05D000782 ORTHO05D000571 1.0e-14 84.3 175 33.7
Peaxi162Scf00744g00121 Petunia axillaris HOM05D000782 ORTHO05D000571 1.0e-14 84.3 175 33.7
Zm00001eb286650 Zea mays HOM05D000782 ORTHO05D000571 1.3e-14 84.0 175 30.9
RcHm_v2.0_Chr3g0461231 Rosa chinensis HOM05D000782 ORTHO05D000571 1.5e-13 80.5 174 31.6
RcHm_v2.0_Chr3g0461221 Rosa chinensis HOM05D000782 ORTHO05D000571 2.5e-13 79.7 174 30.5
Os05g0339200 Oryza sativa ssp. japonica HOM05D000782 ORTHO05D000571 3.3e-13 79.3 174 31.0
FvH4_6g10370 Fragaria vesca HOM05D000782 ORTHO05D000571 4.3e-13 79.0 174 30.5
ATR0681G158 Amborella trichopoda HOM05D000782 ORTHO05D000571 1.2e-12 77.4 192 30.7
Oeu050030.1 Olea europaea HOM05D000782 ORTHO05D000571 1.2e-12 77.4 66 54.5
QL07p033341 Quercus lobata HOM05D000782 ORTHO05D000571 1.2e-12 77.4 180 29.4
PSO017G2589 Papaver somniferum HOM05D000782 ORTHO05D000571 2.1e-12 76.6 181 32.6
GSVIVG01030235001 Vitis vinifera HOM05D000782 ORTHO05D000571 2.8e-12 76.3 175 31.4
Nn2g11064 Nelumbo nucifera HOM05D000782 ORTHO05D000571 4.7e-12 75.5 179 30.2
SHI19227 Sapria himalayana HOM05D000782 ORTHO05D000571 6.2e-12 75.1 102 47.1
arahy.Tifrunner.gnm1.ann1.89W0PE Arachis hypogaea HOM05D000782 ORTHO05D000571 1.1e-11 74.3 154 35.1
COL.COLO4_06873 Corchorus olitorius HOM05D000782 ORTHO05D000571 1.1e-11 74.3 174 31.0
Manes.10G008300 Manihot esculenta HOM05D000782 ORTHO05D000571 1.4e-11 73.9 184 29.3
SEGI_32147 Sequoiadendron giganteum HOM05D000782 ORTHO05D000571 1.4e-11 73.9 175 30.9
Manes.09G114400 Manihot esculenta HOM05D000782 ORTHO05D000571 2.3e-11 73.2 179 32.4
CANSAT35G0383 Cannabis sativa HOM05D000782 ORTHO05D000571 1.2e-10 70.9 177 31.1
PSO384G4945 Papaver somniferum HOM05D000782 ORTHO05D000571 1.5e-10 70.5 178 32.0
HPP92_001136 Vanilla planifolia HOM05D000782 ORTHO05D000571 2.0e-10 70.1 149 30.9
Cfa017086 Carpinus fangiana HOM05D000782 ORTHO05D000571 2.6e-10 69.7 178 30.3
Duzib268G1814 Durio zibethinus HOM05D000782 ORTHO05D000571 2.6e-10 69.7 175 28.6
SEGI_07804 Sequoiadendron giganteum HOM05D000782 ORTHO05D000571 5.8e-10 68.6 175 30.3
SEGI_38654 Sequoiadendron giganteum HOM05D000782 ORTHO05D000571 7.5e-10 68.2 175 28.6
GSVIVG01030237001 Vitis vinifera HOM05D000782 ORTHO05D000571 1.7e-09 67.0 165 32.7
Gohir.A08G098800 Gossypium hirsutum HOM05D000782 ORTHO05D000571 2.9e-09 66.2 174 31.6
PSO017G3624 Papaver somniferum HOM05D000782 ORTHO05D000571 3.7e-09 65.9 178 33.7
PSO017G5530 Papaver somniferum HOM05D000782 ORTHO05D000571 6.4e-09 65.1 178 33.1
Solyc06g050810.3 Solanum lycopersicum HOM05D000782 ORTHO05D000571 4.1e-08 62.4 175 25.1
Nitab4.5_0002768g0070 Nicotiana tabacum HOM05D000782 ORTHO05D000571 5.4e-08 62.0 177 30.5
SGA_v2.0_scaffold120G32965 Striga asiatica HOM05D000782 ORTHO05D000571 5.4e-08 62.0 193 26.4
DCAR_028901 Daucus carota HOM05D000782 ORTHO05D000571 7.0e-08 61.6 134 32.8
Sopen06g016490 Solanum pennellii HOM05D000782 ORTHO05D000571 7.0e-08 61.6 175 25.1
PGSC0003DMG400029151 Solanum tuberosum HOM05D000782 ORTHO05D000571 7.0e-08 61.6 175 24.6
SEGI_34428 Sequoiadendron giganteum HOM05D000551 ORTHO05D000571 9.2e-08 61.2 150 30.0
SEGI_15211 Sequoiadendron giganteum HOM05D000551 ORTHO05D000571 3.0e-06 56.2 152 28.3


User provided reference genes

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