Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 3.4e-152 541.6 265 100.0
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 1.5e-131 473.0 264 87.5
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 5.3e-129 464.5 261 88.1
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 7.7e-120 434.1 245 84.5
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 7.2e-118 427.6 248 83.5
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 2.7e-117 425.6 252 81.3
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 8.0e-117 424.1 262 78.2
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 8.0e-117 424.1 256 81.6
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 1.4e-116 423.3 253 81.0
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 2.3e-116 422.5 245 83.7
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 8.8e-116 420.6 254 80.7
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 2.6e-115 419.1 262 79.8
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 1.4e-113 413.3 254 79.5
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 2.4e-113 412.5 254 80.3
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 2.4e-113 412.5 254 80.3
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 3.1e-113 412.1 222 91.0
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 3.1e-113 412.1 269 76.6
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 3.1e-113 412.1 250 79.6
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 4.1e-113 411.8 252 81.3
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 2.0e-112 409.5 268 76.9
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 2.6e-112 409.1 250 80.0
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 3.5e-112 408.7 253 79.8
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 3.5e-112 408.7 247 78.9
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 3.5e-112 408.7 251 81.3
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 3.5e-112 408.7 261 79.3
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 5.9e-112 407.9 260 77.7
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 5.9e-112 407.9 257 79.0
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 7.7e-112 407.5 232 83.6
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 1.7e-111 406.4 242 80.6
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 1.1e-110 403.7 246 80.9
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 1.9e-110 402.9 247 77.7
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 2.5e-110 402.5 265 74.3
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 2.5e-110 402.5 243 81.5
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 7.2e-110 401.0 255 78.0
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 9.4e-110 400.6 255 77.6
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 1.6e-109 399.8 254 78.3
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 2.1e-109 399.4 251 78.5
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 2.1e-109 399.4 251 80.9
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 3.6e-109 398.7 253 77.1
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 6.1e-109 397.9 242 81.4
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 2.3e-108 396.0 250 78.4
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 2.3e-108 396.0 250 76.4
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 3.0e-108 395.6 252 78.6
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 4.0e-108 395.2 250 76.4
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 6.7e-108 394.4 253 76.7
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 1.2e-107 393.7 231 81.8
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 1.5e-107 393.3 278 71.9
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 7.5e-107 391.0 247 76.1
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 1.7e-106 389.8 270 73.7
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 1.7e-106 389.8 273 70.3
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 2.8e-106 389.0 267 72.3
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 2.8e-106 389.0 243 79.4
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 8.3e-106 387.5 253 72.7
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 1.1e-105 387.1 275 70.2
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 1.8e-105 386.3 263 73.8
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 1.8e-105 386.3 252 75.8
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 1.8e-105 386.3 250 75.6
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 3.1e-105 385.6 272 71.7
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 7.0e-105 384.4 257 73.9
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 7.0e-105 384.4 240 80.0
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 9.1e-105 384.0 271 72.3
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 2.0e-104 382.9 257 72.8
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 5.9e-104 381.3 257 73.2
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 7.7e-104 380.9 256 73.4
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 7.7e-104 380.9 250 75.2
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 1.3e-103 380.2 253 75.1
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 1.7e-103 379.8 256 73.8
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 2.2e-103 379.4 256 73.8
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 2.9e-103 379.0 242 76.0
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 5.0e-103 378.3 231 79.2
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 5.0e-103 378.3 256 73.0
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 6.5e-103 377.9 232 77.6
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 2.5e-102 375.9 247 74.5
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 2.5e-102 375.9 231 78.8
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 7.2e-102 374.4 259 71.8
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 7.2e-102 374.4 259 71.8
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 2.1e-101 372.9 246 75.2
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 3.6e-101 372.1 246 75.2
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 1.4e-100 370.2 232 76.3
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 3.0e-100 369.0 233 77.7
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 1.2e-99 367.1 231 77.1
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 7.0e-97 357.8 318 59.4
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 9.1e-97 357.5 269 66.9
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 1.6e-96 356.7 268 66.0
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 2.7e-96 355.9 218 78.9
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 3.5e-96 355.5 240 71.2
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 5.9e-96 354.8 208 81.2
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 7.7e-96 354.4 232 74.6
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 6.6e-95 351.3 230 70.4
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 1.1e-94 350.5 212 81.1
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 1.5e-94 350.1 210 80.0
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 2.5e-94 349.4 247 67.6
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 2.5e-94 349.4 213 78.9
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 3.3e-94 349.0 301 61.1
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 1.8e-92 343.2 208 77.9
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 1.2e-91 340.5 211 78.7
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 2.0e-91 339.7 241 71.4
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 7.5e-91 337.8 213 77.9
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 1.2e-88 330.5 202 78.7
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 4.3e-86 322.0 199 81.9
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 1.2e-85 320.5 305 58.0
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 4.7e-77 292.0 197 69.5
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 9.2e-73 277.7 174 78.2
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 9.2e-73 277.7 167 83.8
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 2.7e-72 276.2 226 61.5
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 6.2e-69 265.0 229 55.0
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 1.3e-63 247.3 237 52.7
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 1.5e-62 243.8 232 52.6
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 2.4e-60 236.5 148 74.3
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 2.7e-56 223.0 227 50.7
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 6.6e-55 218.4 133 80.5
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 1.6e-53 213.8 137 76.6
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 1.4e-49 200.7 148 70.3
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 1.2e-48 197.6 146 69.9
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 6.0e-48 195.3 146 69.2
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 8.1e-45 184.9 176 58.0
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 4.0e-44 182.6 120 70.0
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 5.3e-44 182.2 114 78.9
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 1.5e-38 164.1 96 81.2
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 9.6e-38 161.4 125 67.2
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 7.6e-35 151.8 95 80.0
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 3.2e-33 146.4 75 90.7
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 1.0e-26 124.8 78 67.9
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 3.9e-23 112.8 111 56.8
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 2.2e-18 97.1 47 87.2
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 9.7e-14 81.6 114 46.5
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 8.2e-13 78.6 114 45.6
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 1.1e-12 78.2 171 29.2
CSS0050126 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D033925 7.4e-06 55.5 55 54.5


User provided reference genes

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