Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G129700 Carya illinoinensis HOM05D006187 ORTHO05D007621 2.3e-119 432.2 208 100.0
CiPaw.11G189300 Carya illinoinensis HOM05D006187 ORTHO05D007621 1.7e-106 389.4 208 91.3
Prupe.4G212700 Prunus persica HOM05D006187 ORTHO05D007621 1.7e-106 389.4 208 89.4
MD11G1218600 Malus domestica HOM05D006187 ORTHO05D007621 2.5e-105 385.6 208 88.9
Haze_09689 Corylus avellana HOM05D006187 ORTHO05D007621 2.3e-103 379.0 209 87.6
COL.COLO4_09662 Corchorus olitorius HOM05D006187 ORTHO05D007621 3.0e-103 378.6 209 87.1
Cfa020345 Carpinus fangiana HOM05D006187 ORTHO05D007621 3.3e-102 375.2 209 86.6
RcHm_v2.0_Chr5g0039431 Rosa chinensis HOM05D006187 ORTHO05D007621 7.4e-102 374.0 208 86.1
TAR626G1058 Trochodendron aralioides HOM05D006187 ORTHO05D007621 7.4e-102 374.0 209 86.1
arahy.Tifrunner.gnm1.ann1.KHU2SV Arachis hypogaea HOM05D006187 ORTHO05D007621 1.3e-101 373.2 209 87.1
arahy.Tifrunner.gnm1.ann1.YIAG1Z Arachis hypogaea HOM05D006187 ORTHO05D007621 1.3e-101 373.2 209 87.1
Gohir.D01G066500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 2.2e-101 372.5 209 85.6
Thecc.07G036900 Theobroma cacao HOM05D006187 ORTHO05D007621 2.2e-101 372.5 209 85.6
Gorai.002G088500 Gossypium raimondii HOM05D006187 ORTHO05D007621 2.8e-101 372.1 209 85.6
Duzib170G0579 Durio zibethinus HOM05D006187 ORTHO05D007621 4.8e-101 371.3 209 85.2
Eucgr.F00764 Eucalyptus grandis HOM05D006187 ORTHO05D007621 6.3e-101 370.9 209 85.6
Nn1g03532 Nelumbo nucifera HOM05D006187 ORTHO05D007621 1.1e-100 370.2 209 84.7
Ciclev10009486m.g Citrus clementina HOM05D006187 ORTHO05D007621 2.4e-100 369.0 209 84.7
Gohir.A01G079500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 2.4e-100 369.0 209 84.7
PGR083G2749 Punica granatum HOM05D006187 ORTHO05D007621 2.4e-100 369.0 209 85.2
FvH4_3g22670 Fragaria vesca HOM05D006187 ORTHO05D007621 3.1e-100 368.6 208 84.6
Manes.15G071900 Manihot esculenta HOM05D006187 ORTHO05D007621 4.1e-100 368.2 209 85.6
CAN.G337.132 Capsicum annuum HOM05D006187 ORTHO05D007621 9.1e-100 367.1 209 83.3
Sed0017183 Sechium edule HOM05D006187 ORTHO05D007621 9.1e-100 367.1 209 83.3
THA.LOC104816937 Tarenaya hassleriana HOM05D006187 ORTHO05D007621 1.2e-99 366.7 209 84.7
CANSAT11G0252 Cannabis sativa HOM05D006187 ORTHO05D007621 2.0e-99 365.9 209 84.2
DCAR_022562 Daucus carota HOM05D006187 ORTHO05D007621 2.6e-99 365.5 209 82.8
Dinv40753 Davidia involucrata HOM05D006187 ORTHO05D007621 2.6e-99 365.5 208 84.1
LjContig00272g0005891 Lotus japonicus HOM05D006187 ORTHO05D007621 2.6e-99 365.5 209 84.2
Lalb_Chr10g0106971 Lupinus albus HOM05D006187 ORTHO05D007621 3.4e-99 365.2 209 84.2
Potri.001G435500 Populus trichocarpa HOM05D006187 ORTHO05D007621 5.9e-99 364.4 209 83.7
Aa31LG10G3660 Aethionema arabicum HOM05D006187 ORTHO05D007621 7.7e-99 364.0 209 83.7
Ah.06g186030 Amaranthus hybridus HOM05D006187 ORTHO05D007621 7.7e-99 364.0 209 80.9
ECA246G0646 Erigeron canadensis HOM05D006187 ORTHO05D007621 1.0e-98 363.6 209 83.3
RhsimUnG0250600 Rhododendron simsii HOM05D006187 ORTHO05D007621 1.0e-98 363.6 209 83.3
Cc05_g13690 Coffea canephora HOM05D006187 ORTHO05D007621 1.3e-98 363.2 209 84.2
VMungo0647G0583 Vigna mungo HOM05D006187 ORTHO05D007621 2.2e-98 362.5 209 84.2
Oeu005532.1 Olea europaea HOM05D006187 ORTHO05D007621 3.8e-98 361.7 209 82.3
Peaxi162Scf00964g00021 Petunia axillaris HOM05D006187 ORTHO05D007621 3.8e-98 361.7 209 82.8
Dinv22262 Davidia involucrata HOM05D006187 ORTHO05D007621 5.0e-98 361.3 209 83.7
Potri.011G139500 Populus trichocarpa HOM05D006187 ORTHO05D007621 5.0e-98 361.3 209 83.7
CSS0049447 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 6.5e-98 360.9 208 82.7
A06p02950 Brassica napus HOM05D006187 ORTHO05D007621 1.1e-97 360.1 209 82.3
Phvul.008G266900 Phaseolus vulgaris HOM05D006187 ORTHO05D007621 1.1e-97 360.1 209 83.7
Solyc07g064590.3 Solanum lycopersicum HOM05D006187 ORTHO05D007621 1.1e-97 360.1 209 82.3
AUR62020447 Chenopodium quinoa HOM05D006187 ORTHO05D007621 1.9e-97 359.4 209 82.8
CsaV3_7G021800 Cucumis sativus L. HOM05D006187 ORTHO05D007621 2.5e-97 359.0 209 81.3
Psat2g010920 Pisum sativum HOM05D006187 ORTHO05D007621 2.5e-97 359.0 209 83.3
TPR.G1184 Trifolium pratense HOM05D006187 ORTHO05D007621 2.5e-97 359.0 209 83.7
C06p05930 Brassica napus HOM05D006187 ORTHO05D007621 3.2e-97 358.6 209 82.3
Ca_06320_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 4.2e-97 358.2 209 84.2
Ca_30809_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 4.2e-97 358.2 209 84.2
FAN16G3112 Fragaria x ananassa HOM05D006187 ORTHO05D007621 4.2e-97 358.2 220 80.0
PSO210G0259 Papaver somniferum HOM05D006187 ORTHO05D007621 5.5e-97 357.8 209 81.8
PGSC0003DMG400022319 Solanum tuberosum HOM05D006187 ORTHO05D007621 9.4e-97 357.1 209 80.9
TWI39G1048 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 9.4e-97 357.1 209 81.3
AL1G58340 Arabidopsis lyrata HOM05D006187 ORTHO05D007621 1.2e-96 356.7 209 81.3
Sopen07g032780 Solanum pennellii HOM05D006187 ORTHO05D007621 1.2e-96 356.7 209 81.3
BcaB07g33507 Brassica carinata HOM05D006187 ORTHO05D007621 1.6e-96 356.3 209 81.8
MSTRG.26280 Avicennia marina HOM05D006187 ORTHO05D007621 2.1e-96 355.9 209 82.3
CARHR040720 Cardamine hirsuta HOM05D006187 ORTHO05D007621 2.7e-96 355.5 209 81.3
AT1G50670 Arabidopsis thaliana HOM05D006187 ORTHO05D007621 3.6e-96 355.1 209 80.9
BcaC08g43245 Brassica carinata HOM05D006187 ORTHO05D007621 4.7e-96 354.8 209 81.8
PSO832G1277 Papaver somniferum HOM05D006187 ORTHO05D007621 4.7e-96 354.8 209 80.9
BraA06t23501Z Brassica rapa HOM05D006187 ORTHO05D007621 7.9e-96 354.0 210 81.9
Carub.0001s3971 Capsella rubella HOM05D006187 ORTHO05D007621 1.4e-95 353.2 209 81.3
EL10Ac4g07806 Beta vulgaris HOM05D006187 ORTHO05D007621 1.8e-95 352.8 208 79.3
AUR62015764 Chenopodium quinoa HOM05D006187 ORTHO05D007621 1.8e-95 352.8 209 80.9
Thhalv10011780m.g Eutrema salsugineum HOM05D006187 ORTHO05D007621 1.8e-95 352.8 209 81.3
FAN11G0395 Fragaria x ananassa HOM05D006187 ORTHO05D007621 3.0e-95 352.1 229 76.9
GSVIVG01037647001 Vitis vinifera HOM05D006187 ORTHO05D007621 3.0e-95 352.1 209 81.3
Sp1g37520 Schrenkiella parvula HOM05D006187 ORTHO05D007621 6.7e-95 350.9 209 80.4
Aqoxy1G03401 Aquilegia oxysepala HOM05D006187 ORTHO05D007621 1.1e-94 350.1 209 80.4
FAN25G1478 Fragaria x ananassa HOM05D006187 ORTHO05D007621 1.1e-94 350.1 229 76.4
Zm00001eb207490 Zea mays HOM05D006187 ORTHO05D007621 1.1e-94 350.1 209 80.9
Migut.K00331 Erythranthe guttata HOM05D006187 ORTHO05D007621 1.5e-94 349.7 208 80.8
CSS0042680 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 2.0e-94 349.4 209 80.9
FAN21G2137 Fragaria x ananassa HOM05D006187 ORTHO05D007621 7.4e-94 347.4 239 73.6
ATR0794G016 Amborella trichopoda HOM05D006187 ORTHO05D007621 9.7e-94 347.1 208 78.8
Sc16g0006050 Simmondsia chinensis HOM05D006187 ORTHO05D007621 9.7e-94 347.1 209 79.9
SalBow5G2755 Salvia bowleyana HOM05D006187 ORTHO05D007621 1.3e-93 346.7 225 76.4
unitig_746.g26546 Utricularia gibba HOM05D006187 ORTHO05D007621 8.2e-93 344.0 209 79.4
HPP92_016292 Vanilla planifolia HOM05D006187 ORTHO05D007621 3.1e-92 342.0 208 79.8
Oeu062696.2 Olea europaea HOM05D006187 ORTHO05D007621 1.3e-90 336.7 243 70.0
SGA_v2.0_scaffold347G49550 Striga asiatica HOM05D006187 ORTHO05D007621 2.9e-90 335.5 208 76.9
Lsat_1_v5_gn_5_3960 Lactuca sativa HOM05D006187 ORTHO05D007621 4.2e-89 331.6 191 82.7
CDE05G0514 Ceratophyllum demersum HOM05D006187 ORTHO05D007621 1.2e-88 330.1 208 74.5
Lalb_Chr17g0348481 Lupinus albus HOM05D006187 ORTHO05D007621 1.2e-88 330.1 190 84.7
TWI38G1854 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 3.6e-88 328.6 187 84.0
MELO3C013167.2 Cucumis melo HOM05D006187 ORTHO05D007621 1.0e-87 327.0 189 81.5
Actinidia35344 Actinidia chinensis HOM05D006187 ORTHO05D007621 1.4e-87 326.6 209 75.6
Medtr5g092720 Medicago truncatula HOM05D006187 ORTHO05D007621 1.8e-87 326.2 190 83.2
Glyma.02G291000 Glycine max HOM05D006187 ORTHO05D007621 5.2e-87 324.7 193 81.3
SEGI_20110 Sequoiadendron giganteum HOM05D006187 ORTHO05D007621 6.7e-87 324.3 206 76.2
Glyma.14G023700 Glycine max HOM05D006187 ORTHO05D007621 2.0e-86 322.8 185 84.3
Mapoly0105s0022 Marchantia polymorpha HOM05D006187 ORTHO05D007621 5.7e-86 321.2 209 73.2
Sabra11G0125500 Salix brachista HOM05D006187 ORTHO05D007621 7.4e-86 320.9 288 59.7
ClCG09G010800 Citrullus lanatus HOM05D006187 ORTHO05D007621 9.7e-86 320.5 196 78.6
HanXRQChr05g0159371 Helianthus annuus HOM05D006187 ORTHO05D007621 1.7e-85 319.7 187 82.9
HanXRQChr08g0233871 Helianthus annuus HOM05D006187 ORTHO05D007621 2.8e-85 318.9 187 82.4
SMO201G0052 Selaginella moellendorffii HOM05D006187 ORTHO05D007621 3.7e-85 318.5 208 71.2
QL08p010320 Quercus lobata HOM05D006187 ORTHO05D007621 4.5e-83 311.6 186 83.3
Pp3c26_11120 Physcomitrium patens HOM05D006187 ORTHO05D007621 5.5e-81 304.7 206 71.4
AagrBONN_evm.TU.Sc2ySwM_344.4367 Anthoceros agrestis HOM05D004720 ORTHO05D007621 3.0e-79 298.9 205 69.3
vmacro09715 Vaccinium macrocarpon HOM05D006187 ORTHO05D007621 5.9e-75 284.6 166 82.5
Nitab4.5_0011129g0020 Nicotiana tabacum HOM05D006187 ORTHO05D007621 7.7e-75 284.3 208 69.2
BolC6t35706H Brassica oleracea HOM05D006187 ORTHO05D007621 9.4e-73 277.3 165 81.2
Lj1A872G52 Lonicera japonica HOM05D006187 ORTHO05D007621 2.4e-68 262.7 151 83.4
SHI26611 Sapria himalayana HOM05D006187 ORTHO05D007621 5.4e-68 261.5 184 67.4
MCO07G461 Micromonas commoda HOM05D006187 ORTHO05D007621 2.3e-66 256.1 201 61.7
Cre09.g409050 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 5.5e-65 251.5 202 58.9
Hma1.2p1_0673F.1_g201350 Hydrangea macrophylla HOM05D006187 ORTHO05D007621 7.5e-62 241.1 209 60.8
CBR_g54108 Chara braunii HOM05D006187 ORTHO05D007621 1.4e-60 236.9 168 69.0
PSO675G5262 Papaver somniferum HOM05D006187 ORTHO05D007621 4.5e-59 231.9 210 54.8
PRCOL_00006206 Prasinoderma coloniale HOM05D006187 ORTHO05D007621 2.0e-54 216.5 206 54.9
HPP92_016312 Vanilla planifolia HOM05D006187 ORTHO05D007621 2.0e-54 216.5 135 77.8
Cpa.g.sc97.3 Carica papaya HOM05D006187 ORTHO05D007621 2.1e-48 196.4 193 58.5
PSO541G4439 Papaver somniferum HOM05D006187 ORTHO05D007621 1.1e-44 184.1 206 47.6
Haze_26155 Corylus avellana HOM05D006187 ORTHO05D007621 3.9e-42 175.6 206 42.7
Cre06.g274700 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 7.5e-38 161.4 140 53.6
MBI18_g14476_MAGBIO Magnolia biondii HOM05D006187 ORTHO05D007621 1.2e-35 154.1 149 58.4
Prupe.4G233700 Prunus persica HOM05D006187 ORTHO05D007621 3.5e-35 152.5 142 59.2
Os02g0164800 Oryza sativa ssp. japonica HOM05D006187 ORTHO05D007621 5.2e-31 138.7 84 78.6
Nitab4.5_0001913g0160 Nicotiana tabacum HOM05D006187 ORTHO05D007621 1.2e-30 137.5 84 78.6
PSO675G9324 Papaver somniferum HOM05D006187 ORTHO05D007621 2.2e-29 133.3 135 49.6
Cfa025770 Carpinus fangiana HOM05D006187 ORTHO05D007621 2.7e-27 126.3 225 36.4
HPP92_016311 Vanilla planifolia HOM05D006187 ORTHO05D007621 6.6e-26 121.7 74 78.4
AUR62015776 Chenopodium quinoa HOM05D006187 ORTHO05D007621 2.7e-19 99.8 83 63.9
QL08p010315 Quercus lobata HOM05D006187 ORTHO05D007621 8.1e-16 88.2 43 88.4


User provided reference genes

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