Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G045100 Carya illinoinensis HOM05D006918 ORTHO05D008525 6.8e-65 252.7 124 100.0
Haze_08532 Corylus avellana HOM05D006918 ORTHO05D008525 8.6e-52 209.1 124 84.7
Cfa019430 Carpinus fangiana HOM05D006918 ORTHO05D008525 5.6e-51 206.5 124 83.9
ClCG11G016340 Citrullus lanatus HOM05D006918 ORTHO05D008525 6.2e-50 203.0 121 82.6
Sed0019951 Sechium edule HOM05D006918 ORTHO05D008525 3.1e-49 200.7 121 81.8
Manes.14G015600 Manihot esculenta HOM05D006918 ORTHO05D008525 2.2e-47 194.5 121 77.7
Thecc.07G154400 Theobroma cacao HOM05D006918 ORTHO05D008525 3.8e-47 193.7 121 76.0
CsaV3_4G031810 Cucumis sativus L. HOM05D006918 ORTHO05D008525 6.4e-47 193.0 120 78.3
QL04p074473 Quercus lobata HOM05D006918 ORTHO05D008525 1.1e-46 192.2 121 76.0
MELO3C010560.2 Cucumis melo HOM05D006918 ORTHO05D008525 2.1e-45 188.0 120 77.5
MD10G1198700 Malus domestica HOM05D006918 ORTHO05D008525 2.1e-45 188.0 121 78.5
Gohir.D05G330400 Gossypium hirsutum HOM05D006918 ORTHO05D008525 1.3e-44 185.3 121 75.2
Gorai.009G354800 Gossypium raimondii HOM05D006918 ORTHO05D008525 1.3e-44 185.3 121 75.2
Potri.011G144300 Populus trichocarpa HOM05D006918 ORTHO05D008525 5.1e-44 183.3 123 70.7
CSS0032788 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 4.3e-43 180.3 120 74.2
Potri.001G457300 Populus trichocarpa HOM05D006918 ORTHO05D008525 4.3e-43 180.3 123 69.1
Dinv19625 Davidia involucrata HOM05D006918 ORTHO05D008525 7.3e-43 179.5 120 72.5
Sabra11G0128500 Salix brachista HOM05D006918 ORTHO05D008525 9.6e-43 179.1 123 69.9
Sabra16G0310000 Salix brachista HOM05D006918 ORTHO05D008525 9.6e-43 179.1 123 67.5
CANSAT56G0998 Cannabis sativa HOM05D006918 ORTHO05D008525 1.6e-42 178.3 120 72.5
MD05G1216400 Malus domestica HOM05D006918 ORTHO05D008525 2.8e-42 177.6 124 71.8
Prupe.4G143000 Prunus persica HOM05D006918 ORTHO05D008525 3.6e-42 177.2 121 75.2
Lj3g0009186 Lotus japonicus HOM05D006918 ORTHO05D008525 4.7e-42 176.8 122 73.0
FAN25G3485 Fragaria x ananassa HOM05D006918 ORTHO05D008525 1.1e-41 175.6 121 74.4
RcHm_v2.0_Chr5g0026921 Rosa chinensis HOM05D006918 ORTHO05D008525 2.4e-41 174.5 121 74.4
CSS0007445 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 9.0e-41 172.6 121 70.2
Phvul.005G056300 Phaseolus vulgaris HOM05D006918 ORTHO05D008525 9.0e-41 172.6 125 69.6
Duzib187G0932 Durio zibethinus HOM05D006918 ORTHO05D008525 1.5e-40 171.8 120 70.0
Duzib187G1351 Durio zibethinus HOM05D006918 ORTHO05D008525 1.5e-40 171.8 120 70.0
FAN21G2086 Fragaria x ananassa HOM05D006918 ORTHO05D008525 1.5e-40 171.8 120 74.2
FAN21G2559 Fragaria x ananassa HOM05D006918 ORTHO05D008525 1.5e-40 171.8 120 74.2
VMungo1080G0996 Vigna mungo HOM05D006918 ORTHO05D008525 2.0e-40 171.4 125 68.0
FvH4_3g15990 Fragaria vesca HOM05D006918 ORTHO05D008525 3.4e-40 170.6 120 74.2
FAN11G3197 Fragaria x ananassa HOM05D006918 ORTHO05D008525 3.4e-40 170.6 120 74.2
CSS0011318 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 4.4e-40 170.2 121 69.4
Glyma.08G172400 Glycine max HOM05D006918 ORTHO05D008525 9.9e-40 169.1 123 69.1
Sc03g0007940 Simmondsia chinensis HOM05D006918 ORTHO05D008525 9.9e-40 169.1 121 66.9
Cpa.g.sc10.35 Carica papaya HOM05D006918 ORTHO05D008525 1.7e-39 168.3 121 68.6
Glyma.15G254900 Glycine max HOM05D006918 ORTHO05D008525 4.9e-39 166.8 123 67.5
Atru.chr12.2189 Acer truncatum HOM05D006918 ORTHO05D008525 2.4e-38 164.5 120 69.2
Ciclev10019503m.g Citrus clementina HOM05D006918 ORTHO05D008525 2.7e-37 161.0 117 69.2
Lalb_Chr25g0285091 Lupinus albus HOM05D006918 ORTHO05D008525 6.0e-37 159.8 119 65.5
TWI39G1081 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 7.8e-37 159.5 114 67.5
Eucgr.F03183 Eucalyptus grandis HOM05D006918 ORTHO05D008525 1.0e-36 159.1 120 63.3
PSO675G9078 Papaver somniferum HOM05D006918 ORTHO05D008525 1.0e-36 159.1 117 67.5
PSO541G4556 Papaver somniferum HOM05D006918 ORTHO05D008525 1.3e-36 158.7 99 74.7
TAR627G0890 Trochodendron aralioides HOM05D006918 ORTHO05D008525 1.3e-36 158.7 113 67.3
Nn7g37872 Nelumbo nucifera HOM05D006918 ORTHO05D008525 1.7e-36 158.3 121 62.0
TWI38G1170 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 2.3e-36 157.9 116 65.5
Cc05_g15990 Coffea canephora HOM05D006918 ORTHO05D008525 5.1e-36 156.8 121 64.5
Ah.04g163440 Amaranthus hybridus HOM05D006918 ORTHO05D008525 1.5e-35 155.2 114 67.5
AUR62043059 Chenopodium quinoa HOM05D006918 ORTHO05D008525 8.1e-34 149.4 114 64.0
Migut.M01563 Erythranthe guttata HOM05D006918 ORTHO05D008525 1.1e-33 149.1 122 60.7
EL10Ac4g08564 Beta vulgaris HOM05D006918 ORTHO05D008525 1.4e-33 148.7 114 65.8
AUR62044624 Chenopodium quinoa HOM05D006918 ORTHO05D008525 3.1e-33 147.5 114 63.2
Ca_03688_v3 Cicer arietinum L. HOM05D006918 ORTHO05D008525 4.0e-33 147.1 125 60.0
DCAR_016820 Daucus carota HOM05D006918 ORTHO05D008525 5.3e-33 146.7 120 59.2
Lalb_Chr01g0007081 Lupinus albus HOM05D006918 ORTHO05D008525 5.3e-33 146.7 122 59.8
Aqoxy6G01201 Aquilegia oxysepala HOM05D006918 ORTHO05D008525 2.6e-32 144.4 117 57.3
Medtr2g069680 Medicago truncatula HOM05D006918 ORTHO05D008525 3.4e-32 144.1 128 59.4
Oeu056983.1 Olea europaea HOM05D006918 ORTHO05D008525 3.4e-32 144.1 117 59.8
DCAR_013746 Daucus carota HOM05D006918 ORTHO05D008525 4.5e-32 143.7 114 61.4
Lj5A202T40 Lonicera japonica HOM05D006918 ORTHO05D008525 2.9e-31 141.0 127 55.9
PGR031G3805 Punica granatum HOM05D006918 ORTHO05D008525 4.9e-31 140.2 135 57.8
Peaxi162Scf00452g00086 Petunia axillaris HOM05D006918 ORTHO05D008525 1.4e-30 138.7 129 58.1
Nitab4.5_0008437g0030 Nicotiana tabacum HOM05D006918 ORTHO05D008525 2.4e-30 137.9 122 62.3
PGSC0003DMG400022129 Solanum tuberosum HOM05D006918 ORTHO05D008525 2.4e-30 137.9 129 56.6
Rhsim04G0005900 Rhododendron simsii HOM05D006918 ORTHO05D008525 5.4e-30 136.7 123 58.5
TPR.G9735 Trifolium pratense HOM05D006918 ORTHO05D008525 5.4e-30 136.7 123 56.9
TPR.G9758 Trifolium pratense HOM05D006918 ORTHO05D008525 2.1e-29 134.8 124 54.8
Lalb_Chr19g0133401 Lupinus albus HOM05D006918 ORTHO05D008525 2.7e-29 134.4 122 57.4
MSTRG.7057 Avicennia marina HOM05D006918 ORTHO05D008525 4.6e-29 133.7 116 55.2
Solyc07g066390.1 Solanum lycopersicum HOM05D006918 ORTHO05D008525 7.9e-29 132.9 129 55.0
Sopen07g034560 Solanum pennellii HOM05D006918 ORTHO05D008525 7.9e-29 132.9 129 55.0
Lsat_1_v5_gn_7_72161 Lactuca sativa HOM05D006918 ORTHO05D008525 1.0e-28 132.5 120 54.2
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 1.8e-28 131.7 120 62.5
Nitab4.5_0001749g0050 Nicotiana tabacum HOM05D006918 ORTHO05D008525 3.9e-28 130.6 128 56.2
AL2G39540 Arabidopsis lyrata HOM05D006918 ORTHO05D008525 8.7e-28 129.4 133 54.9
Thhalv10018334m.g Eutrema salsugineum HOM05D006918 ORTHO05D008525 1.1e-27 129.0 137 54.0
Sp5g34130 Schrenkiella parvula HOM05D006918 ORTHO05D008525 2.5e-27 127.9 137 54.7
TPR.G9740 Trifolium pratense HOM05D006918 ORTHO05D008525 3.3e-27 127.5 117 54.7
Lj5C202T5 Lonicera japonica HOM05D006918 ORTHO05D008525 7.4e-27 126.3 127 55.1
Carub.0002s2595 Capsella rubella HOM05D006918 ORTHO05D008525 1.3e-26 125.6 128 53.9
TAR636G1403 Trochodendron aralioides HOM05D006918 ORTHO05D008525 2.8e-26 124.4 103 59.2
BcaC08g47472 Brassica carinata HOM05D006918 ORTHO05D008525 8.1e-26 122.9 125 53.6
C06p52950 Brassica napus HOM05D006918 ORTHO05D008525 8.1e-26 122.9 125 53.6
AT1G79080 Arabidopsis thaliana HOM05D006918 ORTHO05D008525 5.3e-25 120.2 132 51.5
Psat1g002800 Pisum sativum HOM05D006918 ORTHO05D008525 5.3e-25 120.2 128 54.7
Aa31LG4G1910 Aethionema arabicum HOM05D001696 ORTHO05D001746 1.2e-24 119.0 132 53.8
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 2.6e-24 117.9 126 51.6
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 3.4e-24 117.5 126 51.6
CARHR072750 Cardamine hirsuta HOM05D006918 ORTHO05D008525 3.4e-24 117.5 136 50.0
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 4.5e-24 117.1 130 51.5
CAN.G943.32 Capsicum annuum HOM05D006918 ORTHO05D008525 4.5e-24 117.1 131 48.1
HanXRQChr05g0161001 Helianthus annuus HOM05D006918 ORTHO05D008525 1.7e-23 115.2 124 50.8
Dinv42519 Davidia involucrata HOM05D006918 ORTHO05D008525 2.2e-23 114.8 70 75.7
CDE04G0465 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 3.2e-22 110.9 74 64.9
BcaB02g08665 Brassica carinata HOM05D006918 ORTHO05D008525 4.3e-19 100.5 125 46.4
BcaNung04908 Brassica carinata HOM05D006918 ORTHO05D008525 5.3e-17 93.6 112 46.4
SGA_v2.0_scaffold7G03576 Striga asiatica HOM05D006918 ORTHO05D008525 1.5e-16 92.0 96 50.0
HPP92_013983 Vanilla planifolia HOM05D006918 ORTHO05D008525 3.4e-16 90.9 124 41.1
HPP92_013913 Vanilla planifolia HOM05D006918 ORTHO05D008525 1.3e-15 89.0 121 40.5
ATR1098G023 Amborella trichopoda HOM05D006918 ORTHO05D008525 7.4e-11 73.2 44 75.0
Cfa019933 Carpinus fangiana HOM05D006918 ORTHO05D008525 1.5e-08 65.5 41 73.2
CDE12G0330 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 4.2e-06 57.4 41 58.5
SalBow8G1439 Salvia bowleyana HOM05D006918 ORTHO05D008525 4.2e-06 57.4 37 70.3


User provided reference genes

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