Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G172800 Carya illinoinensis HOM05D006220 ORTHO05D007590 4.2e-126 455.7 456 100.0
Cfa020552 Carpinus fangiana HOM05D006220 ORTHO05D007590 8.6e-95 351.7 443 85.6
CANSAT56G4311 Cannabis sativa HOM05D006220 ORTHO05D007590 6.0e-88 328.9 434 83.6
Gohir.A13G145200 Gossypium hirsutum HOM05D006220 ORTHO05D007590 1.4e-84 317.8 446 81.6
Sp3g13670 Schrenkiella parvula HOM05D006220 ORTHO05D007590 2.0e-83 313.9 446 77.6
arahy.Tifrunner.gnm1.ann1.BQ9KJC Arachis hypogaea HOM05D006220 ORTHO05D007590 1.6e-80 304.3 438 79.9
arahy.Tifrunner.gnm1.ann1.LU5I8Y Arachis hypogaea HOM05D006220 ORTHO05D007590 2.1e-80 303.9 440 79.3
Gohir.D13G150000 Gossypium hirsutum HOM05D006220 ORTHO05D007590 1.7e-79 300.8 446 82.5
Gorai.013G167800 Gossypium raimondii HOM05D006220 ORTHO05D007590 1.7e-79 300.8 446 82.5
Thecc.07G079000 Theobroma cacao HOM05D006220 ORTHO05D007590 5.1e-79 299.3 446 78.3
GSVIVG01014371001 Vitis vinifera HOM05D006220 ORTHO05D007590 3.6e-77 293.1 446 78.9
TWI38G2391 Tripterygium wilfordii HOM05D006220 ORTHO05D007590 4.8e-77 292.7 463 77.3
Prupe.4G184800 Prunus persica HOM05D006220 ORTHO05D007590 4.0e-76 289.7 446 77.4
AL3G27960 Arabidopsis lyrata HOM05D006220 ORTHO05D007590 6.9e-76 288.9 446 80.5
Carub.0003s1514 Capsella rubella HOM05D006220 ORTHO05D007590 1.5e-75 287.7 446 79.8
AT3G15410 Arabidopsis thaliana HOM05D006220 ORTHO05D007590 3.4e-75 286.6 454 77.8
Lalb_Chr20g0109761 Lupinus albus HOM05D006220 ORTHO05D007590 4.5e-75 286.2 430 80.0
BcaB06g29573 Brassica carinata HOM05D006220 ORTHO05D007590 1.3e-74 284.6 446 77.8
Duzib213G0302 Durio zibethinus HOM05D006220 ORTHO05D007590 3.8e-74 283.1 446 77.4
COL.COLO4_09426 Corchorus olitorius HOM05D006220 ORTHO05D007590 6.4e-74 282.3 446 77.8
Lj3g0017554 Lotus japonicus HOM05D006220 ORTHO05D007590 6.4e-74 282.3 427 81.0
RcHm_v2.0_Chr5g0034391 Rosa chinensis HOM05D006220 ORTHO05D007590 6.4e-74 282.3 446 76.5
CSS0010017 Camellia sinensis var. sinensis HOM05D006220 ORTHO05D007590 1.1e-73 281.6 443 80.6
Hund22942 Selenicereus undatus HOM05D006220 ORTHO05D007590 1.1e-73 281.6 446 75.8
Hma1.2p1_0148F.1_g066160 Hydrangea macrophylla HOM05D006220 ORTHO05D007590 3.2e-73 280.0 446 79.8
BraA05t22221Z Brassica rapa HOM05D006220 ORTHO05D007590 1.6e-72 277.7 452 76.8
Thhalv10020366m.g Eutrema salsugineum HOM05D006220 ORTHO05D007590 2.7e-72 276.9 446 76.7
A05p33990 Brassica napus HOM05D006220 ORTHO05D007590 1.8e-71 274.2 443 75.6
ClCG10G006830 Citrullus lanatus HOM05D006220 ORTHO05D007590 8.7e-71 271.9 446 77.1
Atru.chr2.2718 Acer truncatum HOM05D006220 ORTHO05D007590 1.9e-70 270.8 431 80.0
PGR031G1387 Punica granatum HOM05D006220 ORTHO05D007590 1.9e-70 270.8 443 77.9
MD00G1090000 Malus domestica HOM05D006220 ORTHO05D007590 2.5e-70 270.4 498 70.1
MD11G1243700 Malus domestica HOM05D006220 ORTHO05D007590 2.5e-70 270.4 433 64.2
CARHR090460 Cardamine hirsuta HOM05D006220 ORTHO05D007590 3.3e-70 270.0 446 78.5
FAN25G1684 Fragaria x ananassa HOM05D006220 ORTHO05D007590 3.3e-70 270.0 437 78.5
Os02g0826600 Oryza sativa ssp. japonica HOM05D006220 ORTHO05D007590 5.6e-70 269.2 450 74.7
Sed0021838 Sechium edule HOM05D006220 ORTHO05D007590 1.3e-69 268.1 446 78.3
MELO3C016523.2 Cucumis melo HOM05D006220 ORTHO05D007590 2.1e-69 267.3 446 75.1
CAN.G1110.52 Capsicum annuum HOM05D006220 ORTHO05D007590 2.8e-69 266.9 435 77.5
Actinidia05212 Actinidia chinensis HOM05D006220 ORTHO05D007590 3.7e-69 266.5 432 78.9
Glyma.13G278800 Glycine max HOM05D006220 ORTHO05D007590 3.7e-69 266.5 424 78.8
BcaC05g29008 Brassica carinata HOM05D006220 ORTHO05D007590 4.8e-69 266.2 446 75.1
TAR626G0245 Trochodendron aralioides HOM05D006220 ORTHO05D007590 8.1e-69 265.4 433 79.0
CsaV3_3G006190 Cucumis sativus L. HOM05D006220 ORTHO05D007590 4.0e-68 263.1 446 73.3
FvH4_3g20490 Fragaria vesca HOM05D006220 ORTHO05D007590 5.3e-68 262.7 431 78.2
Solyc10g006930.4 Solanum lycopersicum HOM05D006220 ORTHO05D007590 6.9e-68 262.3 431 77.0
AUR62029364 Chenopodium quinoa HOM05D006220 ORTHO05D007590 9.0e-68 261.9 465 53.8
AUR62034280 Chenopodium quinoa HOM05D006220 ORTHO05D007590 9.0e-68 261.9 456 60.3
Sopen10g002840 Solanum pennellii HOM05D006220 ORTHO05D007590 2.0e-67 260.8 431 77.7
FAN16G3027 Fragaria x ananassa HOM05D006220 ORTHO05D007590 3.4e-67 260.0 431 77.7
Cc05_g12250 Coffea canephora HOM05D006220 ORTHO05D007590 9.9e-67 258.5 443 76.3
BolC5t33860H Brassica oleracea HOM05D006220 ORTHO05D007590 1.7e-66 257.7 452 74.1
Manes.03G112900 Manihot esculenta HOM05D006220 ORTHO05D007590 2.9e-66 256.9 434 73.0
DCAR_017149 Daucus carota HOM05D006220 ORTHO05D007590 3.8e-66 256.5 446 76.7
HanXRQChr03g0078511 Helianthus annuus HOM05D006220 ORTHO05D007590 8.4e-66 255.4 446 74.4
FAN11G1997 Fragaria x ananassa HOM05D006220 ORTHO05D007590 2.1e-64 250.8 445 66.3
Sc16g0006920 Simmondsia chinensis HOM05D006220 ORTHO05D007590 2.1e-64 250.8 443 77.0
Aqoxy4G01032 Aquilegia oxysepala HOM05D006220 ORTHO05D007590 6.0e-64 249.2 435 76.3
Potri.011G121700 Populus trichocarpa HOM05D006220 ORTHO05D007590 1.3e-63 248.1 430 76.0
Zm00001eb259320 Zea mays HOM05D006220 ORTHO05D007590 1.8e-63 247.7 451 71.0
VMungo1080G0525 Vigna mungo HOM05D006220 ORTHO05D007590 2.3e-63 247.3 427 75.9
THA.LOC104810484 Tarenaya hassleriana HOM05D006220 ORTHO05D007590 3.9e-63 246.5 446 75.3
vmacro11856 Vaccinium macrocarpon HOM05D006220 ORTHO05D007590 6.7e-63 245.7 499 71.1
Ciclev10007835m.g Citrus clementina HOM05D006220 ORTHO05D007590 1.6e-61 241.1 427 77.5
PSO210G4054 Papaver somniferum HOM05D006220 ORTHO05D007590 8.2e-61 238.8 443 73.4
Nitab4.5_0000207g0180 Nicotiana tabacum HOM05D006220 ORTHO05D007590 1.4e-60 238.0 463 64.1
Psat5g245040 Pisum sativum HOM05D006220 ORTHO05D007590 1.8e-60 237.7 435 73.8
ECA240G2314 Erigeron canadensis HOM05D006220 ORTHO05D007590 3.1e-60 236.9 446 76.0
TPR.G38952 Trifolium pratense HOM05D006220 ORTHO05D007590 3.1e-60 236.9 443 65.5
Eucgr.F03334 Eucalyptus grandis HOM05D006220 ORTHO05D007590 5.3e-60 236.1 446 73.8
Glyma.12G222700 Glycine max HOM05D006220 ORTHO05D007590 5.3e-60 236.1 425 72.5
Lsat_1_v5_gn_9_97140 Lactuca sativa HOM05D006220 ORTHO05D007590 5.3e-60 236.1 454 61.0
HPP92_022050 Vanilla planifolia HOM05D006220 ORTHO05D007590 5.3e-60 236.1 446 70.2
SGA_v2.0_scaffold9G04934 Striga asiatica HOM05D006220 ORTHO05D007590 4.2e-57 226.5 446 75.6
ATR0680G100 Amborella trichopoda HOM05D006220 ORTHO05D007590 1.6e-56 224.6 436 75.2
CDE05G0932 Ceratophyllum demersum HOM05D006220 ORTHO05D007590 2.1e-56 224.2 438 71.7
Aa31LG8G2650 Aethionema arabicum HOM05D006220 ORTHO05D007590 4.6e-56 223.0 504 62.7
Migut.H01927 Erythranthe guttata HOM05D006220 ORTHO05D007590 1.0e-55 221.9 446 74.2
Rhsim06G0196800 Rhododendron simsii HOM05D006220 ORTHO05D007590 5.1e-55 219.5 456 71.5
EL10Ac4g08136 Beta vulgaris HOM05D006220 ORTHO05D007590 2.5e-54 217.2 433 64.2
Phvul.005G083000 Phaseolus vulgaris HOM05D006220 ORTHO05D007590 4.3e-54 216.5 427 74.2
Nn1g06599 Nelumbo nucifera HOM05D006220 ORTHO05D007590 5.7e-54 216.1 481 66.5
Sabra11G0107700 Salix brachista HOM05D006220 ORTHO05D007590 1.6e-53 214.5 497 66.2
Dinv08311 Davidia involucrata HOM05D006220 ORTHO05D007590 5.3e-52 209.5 257 71.6
Medtr2g079560 Medicago truncatula HOM05D006220 ORTHO05D007590 1.5e-51 208.0 403 74.2
PSO832G1845 Papaver somniferum HOM05D006220 ORTHO05D007590 4.5e-51 206.5 424 73.6
C05p51740 Brassica napus HOM05D006220 ORTHO05D007590 5.9e-51 206.1 403 76.9
arahy.Tifrunner.gnm1.ann1.XCJ8AH Arachis hypogaea HOM05D006220 ORTHO05D007590 7.7e-51 205.7 231 64.1
Oeu008016.1 Olea europaea HOM05D006220 ORTHO05D007590 1.3e-50 204.9 226 66.8
Hma1.2p1_0148F.1_g066170 Hydrangea macrophylla HOM05D006220 ORTHO05D007590 1.1e-49 201.8 269 70.6
MSTRG.14365 Avicennia marina HOM05D006220 ORTHO05D007590 2.1e-48 197.6 446 67.7
Cpa.g.sc80.40 Carica papaya HOM05D006220 ORTHO05D007590 6.1e-48 196.1 454 62.8
MBI17_g46353_MAGBIO Magnolia biondii HOM05D006220 ORTHO05D007590 6.7e-47 192.6 224 64.3
Peaxi162Scf00027g02813 Petunia axillaris HOM05D006220 ORTHO05D007590 8.8e-47 192.2 374 80.5
SalBow7G3592 Salvia bowleyana HOM05D006220 ORTHO05D007590 1.7e-42 177.9 444 57.0
Pp3c6_15930 Physcomitrium patens HOM05D006220 ORTHO05D007590 3.3e-38 163.7 442 64.7
AagrBONN_evm.TU.Sc2ySwM_362.1464 Anthoceros agrestis HOM05D006220 ORTHO05D007590 5.7e-38 162.9 451 62.7
SMO200G0168 Selaginella moellendorffii HOM05D006220 ORTHO05D007590 4.8e-37 159.8 433 69.7
Nitab4.5_0001320g0170 Nicotiana tabacum HOM05D006220 ORTHO05D007590 2.2e-34 151.0 173 53.2
Mapoly0029s0091 Marchantia polymorpha HOM05D006220 ORTHO05D007590 1.4e-31 141.7 449 63.0
unitig_26.g9535 Utricularia gibba HOM05D006220 ORTHO05D007590 2.0e-30 137.9 422 37.4
FAN11G3846 Fragaria x ananassa HOM05D000189 ORTHO05D007610 3.1e-28 130.6 109 62.4
Lj1A847G19 Lonicera japonica HOM05D006220 ORTHO05D007590 1.2e-27 128.6 460 61.7
Haze_09468 Corylus avellana HOM05D006220 ORTHO05D007590 2.9e-26 124.0 161 47.8
Sabra11G0106700 Salix brachista HOM05D006220 ORTHO05D007590 5.0e-26 123.2 74 82.4
Sabra11G0107000 Salix brachista HOM05D006220 ORTHO05D007590 5.0e-26 123.2 74 82.4
Sabra11G0105900 Salix brachista HOM05D006220 ORTHO05D007590 1.5e-25 121.7 74 81.1
Sabra11G0105600 Salix brachista HOM05D006220 ORTHO05D007590 3.2e-25 120.6 74 81.1
Nitab4.5_0001320g0180 Nicotiana tabacum HOM05D006220 ORTHO05D007590 9.4e-25 119.0 97 67.0
CBR_g29878 Chara braunii HOM05D006220 ORTHO05D007590 3.3e-22 110.5 158 41.1
HPP92_027622 Vanilla planifolia HOM05D006220 ORTHO05D007590 9.7e-22 109.0 74 70.3
Gohir.1Z049312 Gossypium hirsutum HOM05D006220 ORTHO05D007590 1.7e-21 108.2 95 68.4
MD11G1243500 Malus domestica HOM05D006220 ORTHO05D007590 1.8e-20 104.8 82 64.6
Haze_09464 Corylus avellana HOM05D006220 ORTHO05D007590 1.7e-18 98.2 52 88.5
HanXRQChr09g0260971 Helianthus annuus HOM05D006220 ORTHO05D007590 1.0e-15 89.0 59 69.5
vmacro07967 Vaccinium macrocarpon HOM05D004270 ORTHO05D007590 1.8e-15 88.2 75 60.0
CBR_g29877 Chara braunii HOM05D005358 ORTHO05D006384 4.4e-14 83.6 74 48.6
Lsat_1_v5_gn_9_85500 Lactuca sativa HOM05D006220 ORTHO05D007590 1.2e-08 65.5 77 48.1
AL230U10010 Arabidopsis lyrata HOM05D006220 ORTHO05D007590 8.0e-08 62.8 39 74.4
Cre01.g054100 Chlamydomonas reinhardtii HOM05D006220 ORTHO05D007590 9.8e-06 55.8 72 41.7


User provided reference genes

Program Settings