Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G129900 Carya illinoinensis HOM05D007428 ORTHO05D009308 4.0e-50 201.1 96 100.0
Cfa012244 Carpinus fangiana HOM05D007428 ORTHO05D009308 3.6e-43 177.9 95 90.5
Manes.02G017900 Manihot esculenta HOM05D007428 ORTHO05D009308 8.9e-42 173.3 93 89.2
Ciclev10023047m.g Citrus clementina HOM05D007428 ORTHO05D009308 6.3e-40 167.2 93 86.0
Potri.001G099200 Populus trichocarpa HOM05D007428 ORTHO05D009308 6.3e-40 167.2 93 86.0
GSVIVG01019416001 Vitis vinifera HOM05D007428 ORTHO05D009308 2.4e-39 165.2 93 84.9
Atru.chr9.2117 Acer truncatum HOM05D007428 ORTHO05D009308 1.6e-38 162.5 93 87.1
TAR374G0673 Trochodendron aralioides HOM05D007428 ORTHO05D009308 2.0e-38 162.2 93 81.7
CiPaw.12G089300 Carya illinoinensis HOM05D007428 ORTHO05D009308 2.7e-38 161.8 97 82.5
QL12p031804 Quercus lobata HOM05D007428 ORTHO05D009308 3.5e-38 161.4 132 63.6
Prupe.5G106400 Prunus persica HOM05D007428 ORTHO05D009308 1.0e-37 159.8 93 81.7
Duzib205G1701 Durio zibethinus HOM05D007428 ORTHO05D009308 5.0e-37 157.5 93 83.9
Duzib084G1020 Durio zibethinus HOM05D007428 ORTHO05D009308 8.6e-37 156.8 93 84.9
Phvul.001G130100 Phaseolus vulgaris HOM05D007428 ORTHO05D009308 1.1e-36 156.4 93 80.6
Gohir.D08G134500 Gossypium hirsutum HOM05D001458 ORTHO05D008462 1.5e-36 156.0 93 82.8
RcHm_v2.0_Chr7g0196601 Rosa chinensis HOM05D007428 ORTHO05D009308 1.5e-36 156.0 93 75.3
TAR375G0610 Trochodendron aralioides HOM05D007428 ORTHO05D009308 1.5e-36 156.0 93 77.4
CANSAT21G2180 Cannabis sativa HOM05D007428 ORTHO05D009308 1.9e-36 155.6 94 79.8
Actinidia10608 Actinidia chinensis HOM05D007428 ORTHO05D009308 2.5e-36 155.2 93 79.6
Peaxi162Scf00102g01635 Petunia axillaris HOM05D007428 ORTHO05D009308 3.3e-36 154.8 93 80.6
Gohir.D03G078400 Gossypium hirsutum HOM05D007428 ORTHO05D009308 4.3e-36 154.5 93 81.7
Gorai.003G085700 Gossypium raimondii HOM05D007428 ORTHO05D009308 4.3e-36 154.5 93 81.7
Lalb_Chr25g0287261 Lupinus albus HOM05D007428 ORTHO05D009308 4.3e-36 154.5 93 80.6
MBI11_g02029_MAGBIO Magnolia biondii HOM05D007428 ORTHO05D009308 4.3e-36 154.5 93 78.5
AUR62039842 Chenopodium quinoa HOM05D007428 ORTHO05D009308 5.6e-36 154.1 93 79.6
Glyma.19G137300 Glycine max HOM05D007428 ORTHO05D009308 5.6e-36 154.1 93 79.6
ATR0661G028 Amborella trichopoda HOM05D007428 ORTHO05D009308 7.3e-36 153.7 93 77.4
AUR62000169 Chenopodium quinoa HOM05D007428 ORTHO05D009308 1.2e-35 152.9 93 78.5
ClCG01G002350 Citrullus lanatus HOM05D007428 ORTHO05D009308 1.2e-35 152.9 93 80.6
Sabra01G0074400 Salix brachista HOM05D007428 ORTHO05D009308 1.6e-35 152.5 93 79.6
MELO3C005713.2 Cucumis melo HOM05D007428 ORTHO05D009308 2.1e-35 152.1 93 80.6
CsaV3_5G002410 Cucumis sativus L. HOM05D007428 ORTHO05D009308 2.1e-35 152.1 93 80.6
FAN04G2816 Fragaria x ananassa HOM05D007428 ORTHO05D009308 2.1e-35 152.1 93 74.2
FAN13G2357 Fragaria x ananassa HOM05D007428 ORTHO05D009308 2.1e-35 152.1 93 74.2
FAN18G4254 Fragaria x ananassa HOM05D007428 ORTHO05D009308 2.1e-35 152.1 93 74.2
PGR031G0112 Punica granatum HOM05D007428 ORTHO05D009308 2.1e-35 152.1 93 78.5
Dinv38899 Davidia involucrata HOM05D007428 ORTHO05D009308 2.8e-35 151.8 93 79.6
Nn1g01671 Nelumbo nucifera HOM05D007428 ORTHO05D009308 6.1e-35 150.6 93 75.3
CSS0042206 Camellia sinensis var. sinensis HOM05D007428 ORTHO05D009308 1.8e-34 149.1 93 76.3
PGSC0003DMG400005826 Solanum tuberosum HOM05D007428 ORTHO05D009308 1.8e-34 149.1 93 77.4
Gohir.A08G114300 Gossypium hirsutum HOM05D007428 ORTHO05D009308 4.0e-34 147.9 93 79.6
Solyc08g008120.4 Solanum lycopersicum HOM05D007428 ORTHO05D009308 6.8e-34 147.1 93 76.3
Sopen08g003980 Solanum pennellii HOM05D007428 ORTHO05D009308 6.8e-34 147.1 93 76.3
Eucgr.D01813 Eucalyptus grandis HOM05D007428 ORTHO05D009308 8.9e-34 146.7 93 76.3
MD06G1090900 Malus domestica HOM05D007428 ORTHO05D009308 2.6e-33 145.2 95 76.8
EL10Ac4g10178 Beta vulgaris HOM05D007428 ORTHO05D009308 3.4e-33 144.8 93 74.2
THA.LOC104809367 Tarenaya hassleriana HOM05D007428 ORTHO05D009308 3.4e-33 144.8 93 77.4
Medtr7g091260 Medicago truncatula HOM05D007428 ORTHO05D009308 7.5e-33 143.7 93 75.3
Glyma.03G134700 Glycine max HOM05D007428 ORTHO05D009308 9.8e-33 143.3 97 73.2
TPR.G18241 Trifolium pratense HOM05D007428 ORTHO05D009308 1.7e-32 142.5 93 74.2
Lj1g0002351 Lotus japonicus HOM05D007428 ORTHO05D009308 2.9e-32 141.7 93 72.0
Sed0012859 Sechium edule HOM05D007428 ORTHO05D009308 2.9e-32 141.7 93 76.3
BcaB06g27627 Brassica carinata HOM05D007428 ORTHO05D009308 3.7e-32 141.4 93 75.3
Thhalv10028001m.g Eutrema salsugineum HOM05D007428 ORTHO05D009308 4.9e-32 141.0 93 76.3
Aa31LG9G500 Aethionema arabicum HOM05D007428 ORTHO05D009308 6.4e-32 140.6 93 76.3
BcaC02g08952 Brassica carinata HOM05D007428 ORTHO05D009308 2.4e-31 138.7 93 74.2
A04p14670 Brassica napus HOM05D007428 ORTHO05D009308 2.4e-31 138.7 93 74.2
C04p48540 Brassica napus HOM05D007428 ORTHO05D009308 2.4e-31 138.7 93 74.2
BolC4t26447H Brassica oleracea HOM05D007428 ORTHO05D009308 2.4e-31 138.7 93 74.2
BraA04t17107Z Brassica rapa HOM05D007428 ORTHO05D009308 2.4e-31 138.7 93 74.2
Lsat_1_v5_gn_3_8800 Lactuca sativa HOM05D007428 ORTHO05D009308 4.1e-31 137.9 92 72.8
Sp7g00480 Schrenkiella parvula HOM05D007428 ORTHO05D009308 4.1e-31 137.9 88 77.3
CARHR287610 Cardamine hirsuta HOM05D007428 ORTHO05D009308 5.4e-31 137.5 93 74.2
DCAR_005573 Daucus carota HOM05D007428 ORTHO05D009308 1.6e-30 136.0 93 73.1
Carub.0007s3391 Capsella rubella HOM05D007428 ORTHO05D009308 2.0e-30 135.6 93 73.1
PSO782G0783 Papaver somniferum HOM05D007428 ORTHO05D009308 2.7e-30 135.2 94 72.3
Rhsim02G0235600 Rhododendron simsii HOM05D007428 ORTHO05D009308 4.6e-30 134.4 142 52.8
AL7G47840 Arabidopsis lyrata HOM05D007428 ORTHO05D009308 6.0e-30 134.0 93 73.1
CDE04G2716 Ceratophyllum demersum HOM05D007428 ORTHO05D009308 7.8e-30 133.7 93 72.0
AT5G41560 Arabidopsis thaliana HOM05D007428 ORTHO05D009308 1.3e-29 132.9 93 72.0
arahy.Tifrunner.gnm1.ann1.I9CJRL Arachis hypogaea HOM05D007428 ORTHO05D009308 3.9e-29 131.3 91 71.4
Cc08_g15240 Coffea canephora HOM05D007428 ORTHO05D009308 5.0e-29 131.0 93 71.0
Aqoxy7G00179 Aquilegia oxysepala HOM05D007428 ORTHO05D009308 6.6e-29 130.6 93 65.6
arahy.Tifrunner.gnm1.ann1.LGCW4P Arachis hypogaea HOM05D007428 ORTHO05D009308 1.5e-28 129.4 103 64.1
ECA246G0502 Erigeron canadensis HOM05D007428 ORTHO05D009308 1.9e-28 129.0 86 72.1
PSO478G2995 Papaver somniferum HOM05D007428 ORTHO05D009308 1.9e-28 129.0 94 70.2
HPP92_001758 Vanilla planifolia HOM05D007428 ORTHO05D009308 1.9e-28 129.0 94 69.1
Duzib068G1017 Durio zibethinus HOM05D007428 ORTHO05D009308 1.6e-27 125.9 69 85.5
SEGI_01808 Sequoiadendron giganteum HOM05D007428 ORTHO05D009308 2.8e-27 125.2 93 62.4
SalBow8G4511 Salvia bowleyana HOM05D005196 ORTHO05D006107 4.7e-27 124.4 93 66.7
Nn6g32110 Nelumbo nucifera HOM05D007428 ORTHO05D009308 8.0e-27 123.6 76 78.9
Gorai.004G137700 Gossypium raimondii HOM05D007428 ORTHO05D009308 1.1e-26 123.2 69 84.1
Zm00001eb001890 Zea mays HOM05D007428 ORTHO05D009308 1.1e-26 123.2 95 68.4
SGA_v2.0_scaffold111G31471 Striga asiatica HOM05D007428 ORTHO05D009308 3.1e-26 121.7 92 65.2
FAN08G3453 Fragaria x ananassa HOM05D005196 ORTHO05D006107 8.9e-26 120.2 71 76.1
SMO117G0109 Selaginella moellendorffii HOM05D007428 ORTHO05D009308 3.7e-24 114.8 85 64.7
Cfa012240 Carpinus fangiana HOM05D007428 ORTHO05D009308 4.1e-23 111.3 66 81.8
COL.COLO4_08363 Corchorus olitorius HOM05D007428 ORTHO05D009308 5.4e-23 110.9 64 84.4
Zm00001eb403670 Zea mays HOM05D007428 ORTHO05D009308 7.1e-23 110.5 86 67.4
Hma1.2p1_0216F.1_g091060 Hydrangea macrophylla HOM05D007428 ORTHO05D009308 1.6e-22 109.4 93 62.4
Ah.06g194380 Amaranthus hybridus HOM05D007428 ORTHO05D009308 2.1e-22 109.0 164 41.5
Os03g0125700 Oryza sativa ssp. japonica HOM05D007428 ORTHO05D009308 1.0e-21 106.7 92 63.0
Nitab4.5_0007906g0040 Nicotiana tabacum HOM05D007428 ORTHO05D009308 1.7e-21 105.9 94 60.6
Hund14271 Selenicereus undatus HOM05D007428 ORTHO05D009308 1.1e-20 103.2 50 90.0
MD14G1111700 Malus domestica HOM05D007428 ORTHO05D009308 2.5e-20 102.1 65 78.5
FvH4_5g03180 Fragaria vesca HOM05D007428 ORTHO05D009308 7.3e-20 100.5 64 73.4
HPP92_003464 Vanilla planifolia HOM05D007428 ORTHO05D009308 3.6e-19 98.2 67 68.7
Thecc.03G286400 Theobroma cacao HOM05D007428 ORTHO05D009308 6.2e-19 97.4 49 91.8
Sc01g0009840 Simmondsia chinensis HOM05D007428 ORTHO05D009308 8.9e-18 93.6 49 83.7
Gohir.A02G105400 Gossypium hirsutum HOM05D007428 ORTHO05D009308 1.5e-17 92.8 54 79.6
DCAR_008355 Daucus carota HOM05D001458 ORTHO05D008462 1.4e-15 86.3 67 68.7
MBI17_g11952_MAGBIO Magnolia biondii HOM05D007428 ORTHO05D009308 7.1e-15 84.0 49 69.4
CAN.G792.73 Capsicum annuum HOM05D003118 ORTHO05D009308 9.9e-09 63.5 45 73.3
Haze_08759 Corylus avellana HOM05D007428 ORTHO05D009308 2.9e-08 62.0 28 96.4
vmacro11409 Vaccinium macrocarpon HOM05D007428 ORTHO05D009308 2.9e-08 62.0 45 68.9
Ca_08439_v3 Cicer arietinum L. HOM05D007428 ORTHO05D009308 3.8e-08 61.6 60 56.7
HanXRQChr17g0533231 Helianthus annuus HOM05D007428 ORTHO05D009308 1.4e-07 59.7 59 59.3


User provided reference genes

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