Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G024600 Carya illinoinensis HOM05D004813 ORTHO05D005889 1.8e-253 879.0 536 100.0
Cfa019150 Carpinus fangiana HOM05D004813 ORTHO05D005889 1.4e-176 623.6 535 66.2
Haze_07517 Corylus avellana HOM05D004813 ORTHO05D005889 1.4e-165 587.0 560 69.6
Dinv20637 Davidia involucrata HOM05D004813 ORTHO05D005889 1.4e-157 560.5 555 66.7
Nn4g22713 Nelumbo nucifera HOM05D004813 ORTHO05D005889 1.3e-153 547.4 543 65.7
QL10p010983 Quercus lobata HOM05D004813 ORTHO05D005889 2.4e-152 543.1 538 66.7
Ciclev10019513m.g Citrus clementina HOM05D004813 ORTHO05D005889 1.0e-147 527.7 566 62.5
TAR629G2765 Trochodendron aralioides HOM05D004813 ORTHO05D005889 1.3e-147 527.3 511 68.9
CSS0044871 Camellia sinensis var. sinensis HOM05D004813 ORTHO05D005889 1.1e-146 524.2 553 62.7
Potri.012G082600 Populus trichocarpa HOM05D004813 ORTHO05D005889 7.4e-146 521.5 540 61.7
Manes.14G064300 Manihot esculenta HOM05D004813 ORTHO05D005889 8.2e-145 518.1 544 62.1
CSS0009747 Camellia sinensis var. sinensis HOM05D004813 ORTHO05D005889 2.0e-143 513.5 521 66.6
Thecc.03G014500 Theobroma cacao HOM05D004813 ORTHO05D005889 5.9e-143 511.9 559 63.5
CsaV3_1G000640 Cucumis sativus L. HOM05D004813 ORTHO05D005889 1.1e-141 507.7 549 62.5
MELO3C026213.2 Cucumis melo HOM05D004813 ORTHO05D005889 2.1e-140 503.4 547 62.7
Gorai.008G296300 Gossypium raimondii HOM05D004813 ORTHO05D005889 4.6e-140 502.3 559 63.7
Gohir.D12G275800 Gossypium hirsutum HOM05D004813 ORTHO05D005889 3.0e-139 499.6 560 63.6
Peaxi162Scf00089g01844 Petunia axillaris HOM05D004813 ORTHO05D005889 3.9e-139 499.2 501 63.5
Cc04_g12130 Coffea canephora HOM05D004813 ORTHO05D005889 1.1e-138 497.7 551 62.6
Nitab4.5_0000514g0060 Nicotiana tabacum HOM05D004813 ORTHO05D005889 2.2e-137 493.4 532 63.7
arahy.Tifrunner.gnm1.ann1.9LWV25 Arachis hypogaea HOM05D004813 ORTHO05D005889 3.1e-136 489.6 549 60.8
Phvul.003G201700 Phaseolus vulgaris HOM05D004813 ORTHO05D005889 5.3e-136 488.8 535 60.2
Sabra15G0103000 Salix brachista HOM05D004813 ORTHO05D005889 6.9e-136 488.4 532 61.5
arahy.Tifrunner.gnm1.ann1.J26J1M Arachis hypogaea HOM05D004813 ORTHO05D005889 9.1e-136 488.0 548 60.2
Atru.chr8.1447 Acer truncatum HOM05D004813 ORTHO05D005889 1.2e-135 487.6 553 61.5
Cpa.g.sc76.31 Carica papaya HOM05D004813 ORTHO05D005889 1.2e-135 487.6 513 66.1
COL.COLO4_30069 Corchorus olitorius HOM05D004813 ORTHO05D005889 2.0e-135 486.9 537 60.0
TWI14G0980 Tripterygium wilfordii HOM05D004813 ORTHO05D005889 5.9e-135 485.3 571 59.7
CANSAT80G1068 Cannabis sativa HOM05D004813 ORTHO05D005889 1.0e-134 484.6 545 64.6
Eucgr.K02829 Eucalyptus grandis HOM05D004813 ORTHO05D005889 1.0e-134 484.6 581 60.9
MBI16_g39216_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 1.0e-134 484.6 558 56.3
Oeu016404.1 Olea europaea HOM05D004813 ORTHO05D005889 1.0e-134 484.6 544 62.3
Gohir.A12G275100 Gossypium hirsutum HOM05D004813 ORTHO05D005889 1.3e-134 484.2 546 61.9
MD14G1178200 Malus domestica HOM05D004813 ORTHO05D005889 2.9e-134 483.0 523 62.1
GSVIVG01007723001 Vitis vinifera HOM05D004813 ORTHO05D005889 2.9e-134 483.0 529 54.8
Glyma.05G038800 Glycine max HOM05D004813 ORTHO05D005889 3.8e-134 482.6 543 59.3
MBI17_g17505_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 6.5e-134 481.9 553 60.8
DCAR_031351 Daucus carota HOM05D004813 ORTHO05D005889 2.5e-133 479.9 511 61.1
CARHR281210 Cardamine hirsuta HOM05D004813 ORTHO05D005889 3.2e-133 479.6 535 59.8
VMungo1215G0389 Vigna mungo HOM05D004813 ORTHO05D005889 5.5e-133 478.8 540 58.5
PGR044G0958 Punica granatum HOM05D004813 ORTHO05D005889 1.6e-132 477.2 563 60.0
MBI16_g37492_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 2.1e-132 476.9 550 60.9
Prupe.5G171700 Prunus persica HOM05D004813 ORTHO05D005889 2.7e-132 476.5 551 61.9
TWI23G0210 Tripterygium wilfordii HOM05D004813 ORTHO05D005889 3.6e-132 476.1 579 57.7
Glyma.17G088200 Glycine max HOM05D004813 ORTHO05D005889 6.1e-132 475.3 543 58.7
vmacro16622 Vaccinium macrocarpon HOM05D004813 ORTHO05D005889 1.0e-131 474.6 547 58.7
Thhalv10003981m.g Eutrema salsugineum HOM05D004813 ORTHO05D005889 1.8e-131 473.8 532 61.3
Sed0018710 Sechium edule HOM05D004813 ORTHO05D005889 2.3e-131 473.4 541 61.7
BcaNung05723 Brassica carinata HOM05D004813 ORTHO05D005889 4.4e-130 469.2 547 60.3
Carub.0002s0981 Capsella rubella HOM05D004813 ORTHO05D005889 4.4e-130 469.2 536 60.8
Potri.015G078500 Populus trichocarpa HOM05D004813 ORTHO05D005889 9.7e-130 468.0 539 59.9
BolC9t54072H Brassica oleracea HOM05D004813 ORTHO05D005889 2.2e-129 466.8 535 62.1
C09p11820 Brassica napus HOM05D004813 ORTHO05D005889 8.2e-129 464.9 537 61.8
BcaC04g23133 Brassica carinata HOM05D004813 ORTHO05D005889 1.4e-128 464.2 541 61.4
Sp2g30180 Schrenkiella parvula HOM05D004813 ORTHO05D005889 1.8e-128 463.8 528 61.2
AT5G66540 Arabidopsis thaliana HOM05D004813 ORTHO05D005889 3.1e-128 463.0 532 60.2
BraA09t36642Z Brassica rapa HOM05D004813 ORTHO05D005889 4.1e-128 462.6 537 60.5
MD06G1172400 Malus domestica HOM05D004813 ORTHO05D005889 1.2e-127 461.1 529 60.7
PSO832G2178 Papaver somniferum HOM05D004813 ORTHO05D005889 1.6e-127 460.7 545 55.4
Psat4g058360 Pisum sativum HOM05D004813 ORTHO05D005889 2.0e-127 460.3 528 55.7
AL8G44980 Arabidopsis lyrata HOM05D004813 ORTHO05D005889 2.6e-127 459.9 529 61.2
Carub.0008s2799 Capsella rubella HOM05D004813 ORTHO05D005889 2.6e-127 459.9 542 60.3
A09p09960 Brassica napus HOM05D004813 ORTHO05D005889 3.5e-127 459.5 528 60.0
Haze_17000 Corylus avellana HOM05D004813 ORTHO05D005889 1.0e-126 458.0 539 57.3
BcaB02g10019 Brassica carinata HOM05D004813 ORTHO05D005889 1.7e-126 457.2 532 60.0
Lsat_1_v5_gn_4_75841 Lactuca sativa HOM05D004813 ORTHO05D005889 1.7e-126 457.2 549 59.2
PSO063G0570 Papaver somniferum HOM05D004813 ORTHO05D005889 5.0e-126 455.7 523 57.0
ClCG06G017810 Citrullus lanatus HOM05D004813 ORTHO05D005889 8.5e-126 454.9 600 54.0
A07p17440 Brassica napus HOM05D004813 ORTHO05D005889 1.2e-124 451.1 524 60.1
Lalb_Chr07g0182801 Lupinus albus HOM05D004813 ORTHO05D005889 3.6e-124 449.5 534 58.8
Rhsim12G0165800 Rhododendron simsii HOM05D004813 ORTHO05D005889 3.0e-123 446.4 517 53.2
Ca_21934_v3 Cicer arietinum L. HOM05D004813 ORTHO05D005889 5.2e-123 445.7 534 57.3
Medtr4g105590 Medicago truncatula HOM05D004813 ORTHO05D005889 8.8e-123 444.9 538 57.6
Lj4g0001275 Lotus japonicus HOM05D004813 ORTHO05D005889 1.5e-122 444.1 558 56.8
Sopen03g031900 Solanum pennellii HOM05D004813 ORTHO05D005889 1.5e-122 444.1 539 59.6
CDE05G0644 Ceratophyllum demersum HOM05D004813 ORTHO05D005889 5.7e-122 442.2 567 57.8
Solyc03g112820.4 Solanum lycopersicum HOM05D004813 ORTHO05D005889 4.8e-121 439.1 544 58.6
Aa31LG1G15060 Aethionema arabicum HOM05D004813 ORTHO05D005889 1.4e-120 437.6 543 57.1
PGSC0003DMG400018096 Solanum tuberosum HOM05D004813 ORTHO05D005889 2.4e-120 436.8 547 58.1
Sc04g0001740 Simmondsia chinensis HOM05D004813 ORTHO05D005889 4.1e-120 436.0 586 54.4
unitig_0.g15 Utricularia gibba HOM05D004813 ORTHO05D005889 4.1e-120 436.0 541 55.3
Migut.D01957 Erythranthe guttata HOM05D004813 ORTHO05D005889 7.0e-120 435.3 574 56.4
Atru.chr9.2495 Acer truncatum HOM05D004813 ORTHO05D005889 5.9e-119 432.2 551 57.0
HanXRQChr15g0463041 Helianthus annuus HOM05D004813 ORTHO05D005889 1.0e-118 431.4 558 55.4
SGA_v2.0_scaffold114G31819 Striga asiatica HOM05D004813 ORTHO05D005889 1.1e-117 427.9 611 55.2
RcHm_v2.0_Chr7g0193361 Rosa chinensis HOM05D004813 ORTHO05D005889 1.8e-115 420.6 533 57.0
Lj9A420T39 Lonicera japonica HOM05D004813 ORTHO05D005889 2.3e-115 420.2 541 50.1
Hund02755 Selenicereus undatus HOM05D004813 ORTHO05D005889 4.0e-115 419.5 556 53.1
Aqoxy3G02883 Aquilegia oxysepala HOM05D004813 ORTHO05D005889 1.5e-114 417.5 551 57.0
TPR.G37503 Trifolium pratense HOM05D004813 ORTHO05D005889 1.5e-114 417.5 556 55.6
FAN18G4177 Fragaria x ananassa HOM05D004813 ORTHO05D005889 5.7e-114 415.6 523 56.0
ECA232G2493 Erigeron canadensis HOM05D004813 ORTHO05D005889 3.7e-113 412.9 544 52.2
FAN04G1884 Fragaria x ananassa HOM05D004813 ORTHO05D005889 4.8e-113 412.5 522 57.1
FAN08G2504 Fragaria x ananassa HOM05D004813 ORTHO05D005889 1.1e-112 411.4 532 57.5
FAN13G1879 Fragaria x ananassa HOM05D004813 ORTHO05D005889 1.1e-112 411.4 527 56.4
FvH4_5g05471 Fragaria vesca HOM05D004813 ORTHO05D005889 4.1e-112 409.5 521 58.7
FAN18G0441 Fragaria x ananassa HOM05D004813 ORTHO05D005889 7.0e-112 408.7 523 57.9
SalBow6G0518 Salvia bowleyana HOM05D004813 ORTHO05D005889 1.7e-110 404.1 573 54.8
AUR62013092 Chenopodium quinoa HOM05D004813 ORTHO05D005889 1.1e-109 401.4 502 50.6
ATR1091G095 Amborella trichopoda HOM05D004813 ORTHO05D005889 5.5e-109 399.1 536 48.5
Zm00001eb293550 Zea mays HOM05D004813 ORTHO05D005889 7.2e-109 398.7 512 56.1
EL10Ac9g21440 Beta vulgaris HOM05D004813 ORTHO05D005889 1.7e-105 387.5 567 53.8
AUR62010096 Chenopodium quinoa HOM05D004813 ORTHO05D005889 1.7e-105 387.5 521 47.8
BraA07t29465Z Brassica rapa HOM05D004813 ORTHO05D005889 2.8e-105 386.7 458 59.8
HPP92_018752 Vanilla planifolia HOM05D004813 ORTHO05D005889 5.9e-103 379.0 503 57.5
Os12g0133900 Oryza sativa ssp. japonica HOM05D004813 ORTHO05D005889 8.0e-100 368.6 517 55.5
Os11g0137100 Oryza sativa ssp. japonica HOM05D004813 ORTHO05D005889 1.4e-99 367.9 514 55.1
Nitab4.5_0008678g0020 Nicotiana tabacum HOM05D004813 ORTHO05D005889 2.2e-89 334.0 352 61.6
Ah.01g009190 Amaranthus hybridus HOM05D004813 ORTHO05D005889 5.0e-86 322.8 591 48.6
Pp3c4_31210 Physcomitrium patens HOM05D004813 ORTHO05D005889 3.6e-84 316.6 525 47.2
MD01G1006000 Malus domestica HOM05D004813 ORTHO05D005889 5.2e-83 312.8 344 59.6
Psat4g058280 Pisum sativum HOM05D004813 ORTHO05D005889 2.0e-82 310.8 502 40.6
SMO367G0656 Selaginella moellendorffii HOM05D004813 ORTHO05D005889 5.4e-80 302.8 467 48.6
Mapoly0077s0037 Marchantia polymorpha HOM05D004813 ORTHO05D005889 2.7e-79 300.4 511 46.4
Actinidia19105 Actinidia chinensis HOM05D004813 ORTHO05D005889 2.3e-78 297.4 365 57.3
AagrBONN_evm.TU.Sc2ySwM_369.357 Anthoceros agrestis HOM05D004813 ORTHO05D005889 3.1e-75 287.0 534 39.1
SMO275G0031 Selaginella moellendorffii HOM05D004813 ORTHO05D005889 1.5e-74 284.6 449 43.2
Oeu020911.1 Olea europaea HOM05D004813 ORTHO05D005889 1.7e-73 281.2 532 45.7
arahy.Tifrunner.gnm1.ann1.J34B41 Arachis hypogaea HOM05D004813 ORTHO05D005889 7.3e-61 239.2 213 64.3
CAN.G1166.4 Capsicum annuum HOM05D004813 ORTHO05D005889 1.4e-56 224.9 376 47.3
BolC7t43059H Brassica oleracea HOM05D004813 ORTHO05D005889 2.7e-55 220.7 253 54.2
CAN.G1166.5 Capsicum annuum HOM05D004813 ORTHO05D005889 7.9e-55 219.2 166 68.1
PGR044G0267 Punica granatum HOM05D004813 ORTHO05D005889 6.7e-54 216.1 213 59.6
CBR_g26354 Chara braunii HOM05D004813 ORTHO05D005889 1.8e-51 208.0 221 50.7
Actinidia19106 Actinidia chinensis HOM05D004813 ORTHO05D005889 3.8e-49 200.3 121 85.1
SEGI_37748 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 1.2e-47 195.3 356 50.6
Cre08.g370601 Chlamydomonas reinhardtii HOM05D004813 ORTHO05D005889 2.1e-47 194.5 223 47.5
C07p25370 Brassica napus HOM05D004813 ORTHO05D005889 1.1e-43 182.2 265 48.7
BcaC06g34713 Brassica carinata HOM05D004813 ORTHO05D005889 1.9e-40 171.4 188 53.2
BcaNung06644 Brassica carinata HOM05D004813 ORTHO05D005889 1.9e-40 171.4 188 53.2
PRCOL_00002680 Prasinoderma coloniale HOM05D004813 ORTHO05D005889 1.9e-32 144.8 254 36.6
SEGI_16864 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 4.1e-27 127.1 103 66.0
MBI07_g10351_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 6.5e-25 119.8 153 49.7
Haze_20617 Corylus avellana HOM05D004813 ORTHO05D005889 7.9e-23 112.8 143 50.3
BcaB02g10018 Brassica carinata HOM05D004813 ORTHO05D005889 5.1e-22 110.2 178 55.1
MBI14_g23619_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 5.3e-19 100.1 62 77.4
Lj3g0016907 Lotus japonicus HOM05D004813 ORTHO05D005889 3.2e-16 90.9 62 74.2
MCO01G452 Micromonas commoda HOM05D004813 ORTHO05D005889 3.6e-15 87.4 210 31.9
Potri.003G194550 Populus trichocarpa HOM05D004813 ORTHO05D005889 1.0e-14 85.9 94 53.2
MBI05_g41028_MAGBIO Magnolia biondii HOM05D000669 ORTHO05D005889 1.1e-13 82.4 50 76.0
HanXRQChr11g0336351 Helianthus annuus HOM05D004813 ORTHO05D005889 3.7e-12 77.4 77 54.5
Lj6g0012951 Lotus japonicus HOM05D004813 ORTHO05D005889 3.7e-12 77.4 69 62.3
SalBow1G5081 Salvia bowleyana HOM05D004813 ORTHO05D018488 1.6e-10 72.0 73 56.2
BcaC04g21797 Brassica carinata HOM05D004813 ORTHO05D005889 4.5e-10 70.5 101 44.6
SEGI_40991 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 4.5e-10 70.5 67 56.7
arahy.Tifrunner.gnm1.ann1.YI6NTU Arachis hypogaea HOM05D004813 ORTHO05D005889 3.2e-08 64.3 66 54.5
MBI03_g03787_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 3.2e-08 64.3 37 78.4
MBI14_g41770_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 2.7e-07 61.2 76 51.3
Mapoly0050s0001 Marchantia polymorpha HOM05D004813 ORTHO05D005889 4.7e-07 60.5 67 52.2


User provided reference genes

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