Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G013600 Carya illinoinensis HOM05D007098 ORTHO05D008793 2.8e-192 676.0 629 100.0
Haze_07291 Corylus avellana HOM05D007098 ORTHO05D008793 2.4e-151 540.0 630 88.3
QL10p005624 Quercus lobata HOM05D007098 ORTHO05D008793 2.8e-136 490.0 629 83.9
MD06G1160200 Malus domestica HOM05D007098 ORTHO05D008793 1.9e-132 477.2 625 83.2
Dinv11119 Davidia involucrata HOM05D002040 ORTHO05D002502 6.9e-127 458.8 626 78.9
FAN13G2898 Fragaria x ananassa HOM05D007098 ORTHO05D008793 9.0e-127 458.4 624 83.3
Hma1.2p1_0014F.1_g009950 Hydrangea macrophylla HOM05D007098 ORTHO05D008793 7.6e-126 455.3 625 82.1
Manes.06G113500 Manihot esculenta HOM05D007098 ORTHO05D008793 1.0e-125 454.9 624 77.2
Cfa018906 Carpinus fangiana HOM05D007098 ORTHO05D008793 1.7e-125 454.1 566 89.2
ClCG03G003340 Citrullus lanatus HOM05D007098 ORTHO05D008793 1.9e-124 450.7 620 81.5
FAN18G2243 Fragaria x ananassa HOM05D007098 ORTHO05D008793 4.2e-124 449.5 624 83.0
FvH4_5g07010 Fragaria vesca HOM05D007098 ORTHO05D008793 9.3e-124 448.4 622 83.0
RcHm_v2.0_Chr7g0191671 Rosa chinensis HOM05D007098 ORTHO05D008793 4.6e-123 446.0 624 82.4
Sabra12G0066500 Salix brachista HOM05D007098 ORTHO05D008793 1.3e-122 444.5 625 80.8
Cpa.g.sc4.42 Carica papaya HOM05D007098 ORTHO05D008793 3.0e-122 443.4 617 82.0
Thecc.03G120500 Theobroma cacao HOM05D007098 ORTHO05D008793 3.9e-122 443.0 632 80.2
Gorai.001G062100 Gossypium raimondii HOM05D007098 ORTHO05D008793 5.1e-122 442.6 635 79.2
CsaV3_1G009150 Cucumis sativus L. HOM05D007098 ORTHO05D008793 1.1e-121 441.4 623 77.2
Gohir.D07G058600 Gossypium hirsutum HOM05D007098 ORTHO05D008793 2.5e-121 440.3 635 79.1
EL10Ac7g18049 Beta vulgaris HOM05D007098 ORTHO05D008793 5.7e-121 439.1 624 80.6
Gohir.A07G054300 Gossypium hirsutum HOM05D007098 ORTHO05D008793 7.4e-121 438.7 635 78.7
FAN04G0983 Fragaria x ananassa HOM05D007098 ORTHO05D008793 6.3e-120 435.6 624 71.2
Potri.012G091800 Populus trichocarpa HOM05D007098 ORTHO05D008793 6.9e-119 432.2 625 80.3
Ah.08g218330 Amaranthus hybridus HOM05D007098 ORTHO05D008793 1.2e-118 431.4 627 80.2
Prupe.5G160200 Prunus persica HOM05D007098 ORTHO05D008793 3.4e-118 429.9 624 80.4
Sed0010608 Sechium edule HOM05D007098 ORTHO05D008793 1.0e-117 428.3 630 79.4
TWI39G0887 Tripterygium wilfordii HOM05D007098 ORTHO05D008793 2.5e-116 423.7 624 78.5
MELO3C002322.2 Cucumis melo HOM05D007098 ORTHO05D008793 3.9e-114 416.4 620 77.9
Cc04_g10690 Coffea canephora HOM05D007098 ORTHO05D008793 6.7e-114 415.6 627 78.1
Lj2g0008135 Lotus japonicus HOM05D007098 ORTHO05D008793 8.8e-114 415.2 618 79.9
Ciclev10019054m.g Citrus clementina HOM05D007098 ORTHO05D008793 4.4e-113 412.9 628 78.2
Atru.chr9.986 Acer truncatum HOM05D007098 ORTHO05D008793 1.4e-111 407.9 623 78.8
Duzib205G2031 Durio zibethinus HOM05D007098 ORTHO05D008793 2.4e-111 407.1 632 78.0
AUR62001258 Chenopodium quinoa HOM05D007098 ORTHO05D008793 7.7e-110 402.1 630 78.1
AUR62025750 Chenopodium quinoa HOM05D007098 ORTHO05D008793 6.5e-109 399.1 630 77.0
MSTRG.9703 Avicennia marina HOM05D007098 ORTHO05D008793 5.5e-108 396.0 623 77.5
PGSC0003DMG400015232 Solanum tuberosum HOM05D007098 ORTHO05D008793 9.4e-108 395.2 619 76.7
Nn5g28372 Nelumbo nucifera HOM05D007098 ORTHO05D008793 2.7e-107 393.7 617 78.3
CANSAT80G2237 Cannabis sativa HOM05D007098 ORTHO05D008793 3.6e-107 393.3 625 78.7
GSVIVG01007576001 Vitis vinifera HOM05D007098 ORTHO05D008793 1.0e-106 391.7 615 80.0
THA.LOC104824999 Tarenaya hassleriana HOM05D007098 ORTHO05D008793 3.0e-106 390.2 627 73.7
arahy.Tifrunner.gnm1.ann1.RHK9HC Arachis hypogaea HOM05D007098 ORTHO05D008793 6.7e-106 389.0 629 76.3
Actinidia16202 Actinidia chinensis HOM05D007098 ORTHO05D008793 1.1e-105 388.3 583 79.2
CSS0038177 Camellia sinensis var. sinensis HOM05D007098 ORTHO05D008793 2.6e-105 387.1 593 78.9
arahy.Tifrunner.gnm1.ann1.PW5CDL Arachis hypogaea HOM05D007098 ORTHO05D008793 4.4e-105 386.3 629 76.0
vmacro19257 Vaccinium macrocarpon HOM05D007098 ORTHO05D008793 4.4e-105 386.3 615 76.6
Peaxi162Scf00089g00927 Petunia axillaris HOM05D007098 ORTHO05D008793 2.8e-104 383.6 622 77.8
TAR371G0113 Trochodendron aralioides HOM05D007098 ORTHO05D008793 2.8e-104 383.6 629 77.4
Carub.0008s1032 Capsella rubella HOM05D007098 ORTHO05D008793 4.8e-104 382.9 624 75.8
MBI11_g46348_MAGBIO Magnolia biondii HOM05D007098 ORTHO05D008793 1.4e-103 381.3 619 77.4
Aa31LG3G5960 Aethionema arabicum HOM05D007098 ORTHO05D008793 4.1e-103 379.8 632 75.5
Rhsim08G0182900 Rhododendron simsii HOM05D007098 ORTHO05D008793 5.3e-103 379.4 583 79.1
HanXRQChr09g0272771 Helianthus annuus HOM05D007098 ORTHO05D008793 7.0e-103 379.0 641 73.0
CSS0030055 Camellia sinensis var. sinensis HOM05D007098 ORTHO05D008793 9.1e-103 378.6 412 77.7
Sp6g12370 Schrenkiella parvula HOM05D007098 ORTHO05D008793 1.0e-101 375.2 617 75.5
Glyma.11G111200 Glycine max HOM05D007098 ORTHO05D008793 2.2e-101 374.0 619 76.9
AT5G50280 Arabidopsis thaliana HOM05D007098 ORTHO05D008793 6.5e-101 372.5 617 76.2
AL8G24320 Arabidopsis lyrata HOM05D007098 ORTHO05D008793 1.9e-100 370.9 622 75.1
Lalb_Chr10g0098821 Lupinus albus HOM05D007098 ORTHO05D008793 1.9e-100 370.9 622 74.8
Thhalv10012796m.g Eutrema salsugineum HOM05D007098 ORTHO05D008793 3.2e-100 370.2 617 75.9
Glyma.12G037500 Glycine max HOM05D007098 ORTHO05D008793 3.2e-100 370.2 619 75.9
Nitab4.5_0001360g0150 Nicotiana tabacum HOM05D007098 ORTHO05D008793 4.2e-100 369.8 619 78.0
Phvul.011G039200 Phaseolus vulgaris HOM05D007098 ORTHO05D008793 1.2e-99 368.2 619 75.1
CARHR258300 Cardamine hirsuta HOM05D007098 ORTHO05D008793 1.6e-99 367.9 628 73.6
PSO782G3618 Papaver somniferum HOM05D007098 ORTHO05D008793 2.1e-99 367.5 620 75.3
BolC3t15668H Brassica oleracea HOM05D007098 ORTHO05D008793 3.6e-99 366.7 616 70.8
Dinv38489 Davidia involucrata HOM05D007098 ORTHO05D008793 4.7e-99 366.3 410 76.1
BcaC01g04822 Brassica carinata HOM05D007098 ORTHO05D008793 6.1e-99 365.9 616 70.9
PSO063G4104 Papaver somniferum HOM05D007098 ORTHO05D008793 1.8e-98 364.4 618 76.1
C03p33470 Brassica napus HOM05D007098 ORTHO05D008793 6.7e-98 362.5 616 70.6
A03p27750 Brassica napus HOM05D007098 ORTHO05D008793 8.8e-98 362.1 616 70.0
Nitab4.5_0006717g0020 Nicotiana tabacum HOM05D007098 ORTHO05D008793 9.7e-97 358.6 619 77.2
BraA03t11986Z Brassica rapa HOM05D007098 ORTHO05D008793 1.3e-96 358.2 616 69.8
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 2.2e-96 357.5 628 68.6
BcaB01g02904 Brassica carinata HOM05D007098 ORTHO05D008793 6.3e-96 355.9 626 69.8
Migut.D02039 Erythranthe guttata HOM05D007098 ORTHO05D008793 1.3e-93 348.2 628 73.1
Psat2g130240 Pisum sativum HOM05D007098 ORTHO05D008793 2.9e-93 347.1 617 74.2
Sopen03g030770 Solanum pennellii HOM05D007098 ORTHO05D008793 5.0e-93 346.3 619 74.8
Glyma.02G116500 Glycine max HOM05D007098 ORTHO05D008793 8.5e-93 345.5 622 74.1
Sc22g0003940 Simmondsia chinensis HOM05D007098 ORTHO05D008793 1.9e-92 344.4 677 69.6
TPR.G24468 Trifolium pratense HOM05D007098 ORTHO05D008793 1.0e-90 338.6 619 73.7
Hund21512 Selenicereus undatus HOM05D007098 ORTHO05D008793 2.6e-89 334.0 276 61.2
Medtr5g045490 Medicago truncatula HOM05D007098 ORTHO05D008793 4.4e-89 333.2 621 74.2
VMungo1127G2011 Vigna mungo HOM05D007098 ORTHO05D008793 3.7e-88 330.1 623 72.7
SalBow1G0423 Salvia bowleyana HOM05D007098 ORTHO05D008793 1.4e-87 328.2 619 66.4
Solyc03g111650.4 Solanum lycopersicum HOM05D007098 ORTHO05D008793 9.1e-87 325.5 619 57.7
Lsat_1_v5_gn_4_78280 Lactuca sativa HOM05D007098 ORTHO05D008793 3.5e-86 323.6 638 68.0
arahy.Tifrunner.gnm1.ann1.L7HRZC Arachis hypogaea HOM05D007098 ORTHO05D008793 2.1e-83 314.3 278 57.9
Phvul.003G042600 Phaseolus vulgaris HOM05D007098 ORTHO05D008793 2.8e-83 313.9 615 72.7
CDE09G0597 Ceratophyllum demersum HOM05D007098 ORTHO05D008793 6.1e-83 312.8 627 72.4
ATR0824G168 Amborella trichopoda HOM05D007098 ORTHO05D008793 8.0e-83 312.4 628 71.0
Eucgr.B00165 Eucalyptus grandis HOM05D007098 ORTHO05D008793 4.0e-82 310.1 502 84.7
ECA232G2468 Erigeron canadensis HOM05D001195 ORTHO05D001138 2.0e-81 307.8 404 62.6
VMungo1215G0824 Vigna mungo HOM05D007098 ORTHO05D008793 3.4e-81 307.0 262 59.2
Lj5A101T108 Lonicera japonica HOM05D007098 ORTHO05D008793 9.8e-81 305.4 218 67.0
Ca_04973_v3 Cicer arietinum L. HOM05D007098 ORTHO05D008793 4.7e-75 286.6 399 68.7
CAN.G472.49 Capsicum annuum HOM05D007098 ORTHO05D008793 1.0e-61 242.3 491 81.3
Glyma.01G059100 Glycine max HOM05D007098 ORTHO05D008793 3.6e-59 233.8 509 79.2
HPP92_024236 Vanilla planifolia HOM05D007098 ORTHO05D008793 6.8e-58 229.6 502 77.3
SEGI_05165 Sequoiadendron giganteum HOM05D007098 ORTHO05D008793 6.6e-53 213.0 196 52.6
Os05g0294600 Oryza sativa ssp. japonica HOM05D007098 ORTHO05D008793 1.2e-49 202.2 549 67.0
Cpa.g.sc4.27 Carica papaya HOM05D006000 ORTHO05D008793 1.0e-37 162.5 125 64.0
Ca_26530_v3 Cicer arietinum L. HOM05D005706 ORTHO05D008793 8.1e-35 152.9 237 85.2
Ca_30971_v3 Cicer arietinum L. HOM05D007098 ORTHO05D008793 1.0e-29 136.0 176 45.5
Mapoly0023s0082 Marchantia polymorpha HOM05D007098 ORTHO05D008793 1.9e-28 131.7 201 33.8
DCAR_021600 Daucus carota HOM05D007098 ORTHO05D008793 4.0e-26 124.0 81 75.3
Duzib084G0201 Durio zibethinus HOM05D007098 ORTHO05D008793 1.3e-24 119.0 88 65.9
Lj5C101T15 Lonicera japonica HOM05D007098 ORTHO05D008793 2.2e-24 118.2 85 69.4
Hma1.2p1_0014F.1_g009960 Hydrangea macrophylla HOM05D007098 ORTHO05D008793 1.6e-22 112.1 68 85.3
MBI11_g46065_MAGBIO Magnolia biondii HOM05D007098 ORTHO05D008793 1.6e-22 112.1 79 72.2
AagrBONN_evm.TU.Sc2ySwM_228.5130 Anthoceros agrestis HOM05D007098 ORTHO05D008793 3.5e-22 110.9 208 30.3
Zm00001eb154110 Zea mays HOM05D007098 ORTHO05D008793 4.8e-19 100.5 428 79.9
arahy.Tifrunner.gnm1.ann1.0Z4KK5 Arachis hypogaea HOM05D007098 ORTHO05D008793 1.8e-10 72.0 55 65.5
ClCG03G003360 Citrullus lanatus HOM05D007098 ORTHO05D008793 1.8e-10 72.0 48 70.8
THA.LOC104824846 Tarenaya hassleriana HOM05D000001 ORTHO05D000003 2.1e-06 58.5 163 27.6
Sc03g0010580 Simmondsia chinensis HOM05D002453 ORTHO05D008746 7.9e-06 56.6 121 24.8


User provided reference genes

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