Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G064300 Carya illinoinensis HOM05D006866 ORTHO05D008689 1.1e-118 431.4 210 100.0
Haze_06061 Corylus avellana HOM05D006866 ORTHO05D008689 4.3e-94 349.7 191 88.5
Cfa000706 Carpinus fangiana HOM05D006866 ORTHO05D008689 1.6e-93 347.8 191 88.0
QL11p016582 Quercus lobata HOM05D006866 ORTHO05D008689 3.4e-83 313.5 228 68.9
GSVIVG01012065001 Vitis vinifera HOM05D006866 ORTHO05D008689 2.1e-77 294.3 202 69.3
Prupe.4G112600 Prunus persica HOM05D006866 ORTHO05D008689 1.8e-76 291.2 194 71.6
TWI38G1826 Tripterygium wilfordii HOM05D006866 ORTHO05D008689 6.9e-76 289.3 192 70.8
RcHm_v2.0_Chr5g0020151 Rosa chinensis HOM05D006866 ORTHO05D008689 1.2e-75 288.5 200 69.5
MD10G1231700 Malus domestica HOM05D006866 ORTHO05D008689 1.5e-75 288.1 174 77.6
FAN21G0631 Fragaria x ananassa HOM05D006866 ORTHO05D008689 2.6e-75 287.3 193 71.5
Gorai.011G048600 Gossypium raimondii HOM05D006866 ORTHO05D008689 5.8e-75 286.2 209 65.1
CANSAT35G0964 Cannabis sativa HOM05D006866 ORTHO05D008689 9.9e-75 285.4 193 71.5
Duzib160G0228 Durio zibethinus HOM05D006866 ORTHO05D008689 1.7e-74 284.6 193 68.4
Actinidia22399 Actinidia chinensis HOM05D006866 ORTHO05D008689 2.2e-74 284.3 192 69.3
MELO3C021744.2 Cucumis melo HOM05D006866 ORTHO05D008689 3.8e-74 283.5 192 68.2
FvH4_3g12360 Fragaria vesca HOM05D006866 ORTHO05D008689 3.8e-74 283.5 194 70.6
Thecc.06G143300 Theobroma cacao HOM05D006866 ORTHO05D008689 4.9e-74 283.1 193 69.9
CSS0001165 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 6.4e-74 282.7 191 69.6
CsaV3_1G046260 Cucumis sativus L. HOM05D006866 ORTHO05D008689 6.4e-74 282.7 192 67.2
Potri.012G123600 Populus trichocarpa HOM05D006866 ORTHO05D008689 1.4e-73 281.6 192 67.7
COL.COLO4_30996 Corchorus olitorius HOM05D006866 ORTHO05D008689 1.2e-72 278.5 198 67.2
Oeu060351.1 Olea europaea HOM05D006866 ORTHO05D008689 6.0e-72 276.2 182 69.2
ClCG01G009530 Citrullus lanatus HOM05D006866 ORTHO05D008689 7.8e-72 275.8 193 65.8
Sabra12G0093800 Salix brachista HOM05D006866 ORTHO05D008689 1.0e-71 275.4 212 62.3
Dinv01379 Davidia involucrata HOM05D006866 ORTHO05D008689 1.7e-71 274.6 173 73.4
FAN25G0624 Fragaria x ananassa HOM05D006866 ORTHO05D008689 2.3e-71 274.2 201 67.7
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 3.9e-71 273.5 191 66.0
CSS0037136 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 5.1e-71 273.1 191 68.6
Nitab4.5_0001288g0160 Nicotiana tabacum HOM05D006866 ORTHO05D008689 1.6e-69 268.1 202 62.9
TAR626G0654 Trochodendron aralioides HOM05D006866 ORTHO05D008689 3.6e-69 266.9 173 71.1
Lalb_Chr02g0143291 Lupinus albus HOM05D006866 ORTHO05D008689 1.1e-68 265.4 187 64.7
vmacro03523 Vaccinium macrocarpon HOM05D006866 ORTHO05D008689 1.1e-68 265.4 219 59.4
Sopen02g017930 Solanum pennellii HOM05D006866 ORTHO05D008689 1.4e-68 265.0 193 64.2
Peaxi162Scf00149g00318 Petunia axillaris HOM05D006866 ORTHO05D008689 1.8e-68 264.6 192 63.5
Nn7g38175 Nelumbo nucifera HOM05D006866 ORTHO05D008689 5.3e-68 263.1 194 61.9
Aqoxy1G01457 Aquilegia oxysepala HOM05D006866 ORTHO05D008689 6.9e-68 262.7 199 61.8
Gohir.A10G044500 Gossypium hirsutum HOM05D006866 ORTHO05D008689 9.0e-68 262.3 164 73.8
Solyc02g068760.4 Solanum lycopersicum HOM05D006866 ORTHO05D008689 9.0e-68 262.3 196 62.8
PGSC0003DMG400010422 Solanum tuberosum HOM05D006866 ORTHO05D008689 1.2e-67 261.9 192 64.1
arahy.Tifrunner.gnm1.ann1.X32MFV Arachis hypogaea HOM05D006866 ORTHO05D008689 1.5e-67 261.5 187 66.3
Gohir.D10G045700 Gossypium hirsutum HOM05D006866 ORTHO05D008689 1.5e-67 261.5 164 73.2
Sed0016966 Sechium edule HOM05D006866 ORTHO05D003855 1.5e-67 261.5 202 62.4
AUR62006933 Chenopodium quinoa HOM05D006866 ORTHO05D008689 2.6e-67 260.8 182 62.6
AUR62006935 Chenopodium quinoa HOM05D006866 ORTHO05D008689 3.4e-67 260.4 182 62.1
Psat6g231320 Pisum sativum HOM05D006866 ORTHO05D008689 5.8e-67 259.6 192 63.0
Ca_25672_v3 Cicer arietinum L. HOM05D006866 ORTHO05D008689 7.6e-67 259.2 192 63.5
CAN.G149.30 Capsicum annuum HOM05D006866 ORTHO05D008689 1.7e-66 258.1 191 62.3
Glyma.20G109800 Glycine max HOM05D006866 ORTHO05D008689 3.8e-66 256.9 192 62.0
Cc09_g06040 Coffea canephora HOM05D006866 ORTHO05D008689 4.9e-66 256.5 185 63.8
Lj5g0008795 Lotus japonicus HOM05D006866 ORTHO05D008689 6.4e-66 256.1 185 64.3
TPR.G2424 Trifolium pratense HOM05D006866 ORTHO05D008689 8.4e-66 255.8 187 64.2
VMungo0720G0148 Vigna mungo HOM05D006866 ORTHO05D008689 8.4e-66 255.8 187 63.1
BcaB02g09476 Brassica carinata HOM05D006866 ORTHO05D008689 1.9e-65 254.6 205 61.0
BolC4t22960H Brassica oleracea HOM05D006866 ORTHO05D008689 5.4e-65 253.1 205 60.5
Thhalv10017758m.g Eutrema salsugineum HOM05D006866 ORTHO05D008689 5.4e-65 253.1 191 61.3
Aa31LG9G16090 Aethionema arabicum HOM05D006866 ORTHO05D008689 7.1e-65 252.7 191 62.3
BraA05t20001Z Brassica rapa HOM05D006866 ORTHO05D008689 2.1e-64 251.1 192 63.0
Sabra12G0093100 Salix brachista HOM05D006866 ORTHO05D008689 2.7e-64 250.8 157 70.7
AL4G31140 Arabidopsis lyrata HOM05D006866 ORTHO05D008689 3.5e-64 250.4 192 62.0
EL10Ac4g09707 Beta vulgaris HOM05D006866 ORTHO05D008689 3.5e-64 250.4 182 61.5
A05p10610 Brassica napus HOM05D006866 ORTHO05D008689 3.5e-64 250.4 192 63.0
DCAR_001319 Daucus carota HOM05D006866 ORTHO05D008689 4.6e-64 250.0 194 60.3
THA.LOC104814359 Tarenaya hassleriana HOM05D006866 ORTHO05D008689 4.6e-64 250.0 186 64.0
AT2G35130 Arabidopsis thaliana HOM05D006866 ORTHO05D008689 6.0e-64 249.6 191 62.3
C04p13710 Brassica napus HOM05D006866 ORTHO05D008689 7.9e-64 249.2 198 61.1
Sp4g17360 Schrenkiella parvula HOM05D006866 ORTHO05D008689 1.0e-63 248.8 191 62.3
Medtr1g112240 Medicago truncatula HOM05D006866 ORTHO05D008689 2.3e-63 247.7 168 67.9
Carub.0004s1681 Capsella rubella HOM05D006866 ORTHO05D008689 8.7e-63 245.7 193 60.6
Eucgr.D00981 Eucalyptus grandis HOM05D006866 ORTHO05D008689 1.5e-62 245.0 184 63.0
MBI18_g11481_MAGBIO Magnolia biondii HOM05D006866 ORTHO05D008689 1.5e-62 245.0 196 60.2
HanXRQChr09g0258331 Helianthus annuus HOM05D006866 ORTHO05D008689 5.6e-62 243.0 195 59.5
TPR.G2448 Trifolium pratense HOM05D006866 ORTHO05D008689 6.2e-61 239.6 216 54.6
ECA232G0121 Erigeron canadensis HOM05D006866 ORTHO05D008689 8.1e-61 239.2 198 57.1
Migut.M01983 Erythranthe guttata HOM05D006866 ORTHO05D008689 8.1e-61 239.2 198 59.6
Phvul.007G021100 Phaseolus vulgaris HOM05D006866 ORTHO05D008689 1.4e-60 238.4 168 64.9
ATR0763G194 Amborella trichopoda HOM05D006866 ORTHO05D008689 6.4e-58 229.6 156 67.9
Sabra12G0093000 Salix brachista HOM05D000009 ORTHO05D000008 6.4e-58 229.6 208 55.8
PSO675G2302 Papaver somniferum HOM05D006866 ORTHO05D008689 4.2e-57 226.9 183 56.3
PSO541G3299 Papaver somniferum HOM05D006866 ORTHO05D008689 1.0e-55 222.2 162 60.5
Nitab4.5_0007533g0010 Nicotiana tabacum HOM05D006866 ORTHO05D008689 3.9e-55 220.3 165 64.2
CARHR129270 Cardamine hirsuta HOM05D006866 ORTHO05D008689 1.1e-54 218.8 136 72.1
CDE01G0264 Ceratophyllum demersum HOM05D006866 ORTHO05D008689 4.3e-54 216.9 186 59.1
arahy.Tifrunner.gnm1.ann1.0F554D Arachis hypogaea HOM05D006866 ORTHO05D008689 3.7e-53 213.8 193 56.0
Zm00001eb233080 Zea mays HOM05D006866 ORTHO05D008689 8.2e-53 212.6 163 60.7
EL10Ac8g19312 Beta vulgaris HOM05D006866 ORTHO05D008689 1.4e-52 211.8 186 53.2
Lsat_1_v5_gn_8_117320 Lactuca sativa HOM05D006866 ORTHO05D008689 5.8e-51 206.5 139 66.9
Cpa.g.sc135.7 Carica papaya HOM05D006866 ORTHO05D008689 1.7e-50 204.9 129 70.5
AUR62000579 Chenopodium quinoa HOM05D006866 ORTHO05D008689 8.4e-50 202.6 182 53.8
Lj2A350T60 Lonicera japonica HOM05D006866 ORTHO05D008689 1.3e-47 195.3 204 50.5
PGR004G0545 Punica granatum HOM05D006866 ORTHO05D008689 1.8e-39 168.3 162 51.2
HanXRQChr10g0279011 Helianthus annuus HOM05D006866 ORTHO05D008689 1.3e-34 152.1 132 55.3
Lsat_1_v5_gn_6_52341 Lactuca sativa HOM05D006866 ORTHO05D008689 1.1e-30 139.0 108 62.0
Os02g0170000 Oryza sativa ssp. japonica HOM05D006866 ORTHO05D008689 1.1e-30 139.0 108 59.3
Sabra12G0092900 Salix brachista HOM05D000009 ORTHO05D000008 1.1e-28 132.5 130 50.8
Manes.13G080558 Manihot esculenta HOM05D006866 ORTHO05D008689 4.5e-27 127.1 74 74.3
SMO165G0132 Selaginella moellendorffii HOM05D006866 ORTHO05D008689 1.4e-23 115.5 130 40.0
Haze_06053 Corylus avellana HOM05D006866 ORTHO05D008689 3.0e-23 114.4 214 40.2
Cfa008015 Carpinus fangiana HOM05D000082 ORTHO05D008689 1.5e-22 112.1 122 54.1
AagrBONN_evm.TU.Sc2ySwM_368.1444 Anthoceros agrestis HOM05D006866 ORTHO05D008689 3.7e-21 107.5 128 38.3
Mapoly0002s0014 Marchantia polymorpha HOM05D006866 ORTHO05D008689 5.3e-20 103.6 147 34.7
Pp3c6_26210 Physcomitrium patens HOM05D006866 ORTHO05D008689 6.5e-18 96.7 140 34.3
RhsimUnG0235100 Rhododendron simsii HOM05D006866 ORTHO05D008689 8.5e-18 96.3 54 75.9
Pp3c16_5890 Physcomitrium patens HOM05D006866 ORTHO05D008689 1.9e-17 95.1 131 35.9
CSS0019706 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 1.6e-16 92.0 53 73.6
CAN.G27.8 Capsicum annuum HOM05D006866 ORTHO05D008689 2.0e-14 85.1 74 55.4
Lsat_1_v5_gn_3_50301 Lactuca sativa HOM05D006866 ORTHO05D008689 2.0e-14 85.1 55 69.1
Lsat_1_v5_gn_8_128381 Lactuca sativa HOM05D006866 ORTHO05D008689 2.2e-10 71.6 61 54.1
Ciclev10015335m.g Citrus clementina HOM05D006866 ORTHO05D008689 2.1e-08 65.1 37 78.4
CARHR141110 Cardamine hirsuta HOM05D006866 ORTHO05D008689 6.1e-08 63.5 45 62.2
CAN.G1114.2 Capsicum annuum HOM05D006866 ORTHO05D008689 2.3e-07 61.6 39 66.7
Haze_06062 Corylus avellana HOM05D006866 ORTHO05D008689 1.5e-06 58.9 37 83.8
CARHR180830 Cardamine hirsuta HOM05D006866 ORTHO05D008689 5.7e-06 57.0 46 56.5
CSS0001056 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 7.5e-06 56.6 32 78.1
CSS0048441 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 7.5e-06 56.6 32 78.1


User provided reference genes

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